RNA–Protein interactions for RNA: ENST00000359238.6

SNX11-201, Transcript of sorting nexin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX11, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-201ENST00000359238 ELF5Q9UKW6 265 aaPredicted RBP17.4■□□□□ 0.38
SNX11-201ENST00000359238 IL1AP01583 271 aa17.39■□□□□ 0.38
SNX11-201ENST00000359238 UGT2B7P16662 529 aa17.39■□□□□ 0.38
SNX11-201ENST00000359238 IL32P24001 234 aa17.39■□□□□ 0.38
SNX11-201ENST00000359238 CRATP43155 626 aa17.39■□□□□ 0.38
SNX11-201ENST00000359238 SSR2P43308 183 aa17.39■□□□□ 0.38
SNX11-201ENST00000359238 MRPL28Q13084 256 aaKnown RBP17.39■□□□□ 0.38
SNX11-201ENST00000359238 MICAQ29983 383 aa17.39■□□□□ 0.38
SNX11-201ENST00000359238 NUDT13Q86X67 352 aa17.39■□□□□ 0.38
SNX11-201ENST00000359238 NECAB3Q96P71 396 aaPredicted RBP17.39■□□□□ 0.38
SNX11-201ENST00000359238 CPNE7Q9UBL6 633 aa17.39■□□□□ 0.38
SNX11-201ENST00000359238 SSR3Q9UNL2 185 aa17.39■□□□□ 0.38
SNX11-201ENST00000359238 ATG4BQ9Y4P1 393 aa17.39■□□□□ 0.38
SNX11-201ENST00000359238 NINQ8N4C6 2090 aa17.39■□□□□ 0.37
SNX11-201ENST00000359238 A0A1W2PR77 199 aa17.39■□□□□ 0.37
SNX11-201ENST00000359238 GSAPA4D1B5 854 aa17.39■□□□□ 0.37
SNX11-201ENST00000359238 PGRMC2O15173 223 aa17.39■□□□□ 0.37
SNX11-201ENST00000359238 OPN1SWP03999 348 aa17.39■□□□□ 0.37
SNX11-201ENST00000359238 CTSBP07858 339 aa17.39■□□□□ 0.37
SNX11-201ENST00000359238 SOAT1P35610 550 aa17.39■□□□□ 0.37
SNX11-201ENST00000359238 CLDN20P56880 219 aa17.39■□□□□ 0.37
SNX11-201ENST00000359238 HSPB3Q12988 150 aa17.39■□□□□ 0.37
SNX11-201ENST00000359238 MFSD13AQ14CX5 517 aa17.39■□□□□ 0.37
SNX11-201ENST00000359238 DDI2Q5TDH0 399 aa17.39■□□□□ 0.37
SNX11-201ENST00000359238 C18orf63Q68DL7 685 aa17.39■□□□□ 0.37
SNX11-201ENST00000359238 FCRL6Q6DN72 434 aa17.39■□□□□ 0.37
SNX11-201ENST00000359238 HDDC2Q7Z4H3 204 aa17.39■□□□□ 0.37
SNX11-201ENST00000359238 VPS37AQ8NEZ2 397 aa17.39■□□□□ 0.37
SNX11-201ENST00000359238 LHFPL5Q8TAF8 219 aa17.39■□□□□ 0.37
SNX11-201ENST00000359238 GPR137Q96N19 417 aa17.39■□□□□ 0.37
SNX11-201ENST00000359238 DOHHQ9BU89 302 aa17.39■□□□□ 0.37
SNX11-201ENST00000359238 RSPO3Q9BXY4 272 aaPredicted RBP17.39■□□□□ 0.37
SNX11-201ENST00000359238 MCUBQ9NWR8 336 aa17.39■□□□□ 0.37
SNX11-201ENST00000359238 NDUFB11Q9NX14 153 aa17.39■□□□□ 0.37
SNX11-201ENST00000359238 NDUFAF4Q9P032 175 aa17.39■□□□□ 0.37
SNX11-201ENST00000359238 FBXO9Q9UK97 447 aaPredicted RBP17.39■□□□□ 0.37
SNX11-201ENST00000359238 SLC6A14Q9UN76 642 aa17.39■□□□□ 0.37
SNX11-201ENST00000359238 LOC105369274A0A096LPK9 316 aa17.38■□□□□ 0.37
SNX11-201ENST00000359238 LOC102723532A0A0G2JNH3 316 aa17.38■□□□□ 0.37
SNX11-201ENST00000359238 B4DGG1 531 aa17.38■□□□□ 0.37
SNX11-201ENST00000359238 SMLR1H3BR10 107 aa17.38■□□□□ 0.37
SNX11-201ENST00000359238 SLC43A1O75387 559 aa17.38■□□□□ 0.37
SNX11-201ENST00000359238 NME6O75414 186 aaPredicted RBP17.38■□□□□ 0.37
SNX11-201ENST00000359238 MTRF1O75570 445 aaKnown RBP17.38■□□□□ 0.37
SNX11-201ENST00000359238 FAM157BP0CG42 384 aa17.38■□□□□ 0.37
SNX11-201ENST00000359238 TNNI3P19429 210 aa17.38■□□□□ 0.37
SNX11-201ENST00000359238 TNFRSF1BP20333 461 aa17.38■□□□□ 0.37
SNX11-201ENST00000359238 CMPK1P30085 196 aa17.38■□□□□ 0.37
SNX11-201ENST00000359238 TALDO1P37837 337 aa17.38■□□□□ 0.37
SNX11-201ENST00000359238 PER3P56645 1201 aa17.38■□□□□ 0.37
SNX11-201ENST00000359238 CYP27C1Q4G0S4 372 aa17.38■□□□□ 0.37
SNX11-201ENST00000359238 NDUFAF5Q5TEU4 345 aa17.38■□□□□ 0.37
SNX11-201ENST00000359238 FRMPD2BQ6IN97 320 aa17.38■□□□□ 0.37
SNX11-201ENST00000359238 ABHD17CQ6PCB6 329 aa17.38■□□□□ 0.37
SNX11-201ENST00000359238 OR4N4Q8N0Y3 316 aa17.38■□□□□ 0.37
SNX11-201ENST00000359238 LGI4Q8N135 537 aa17.38■□□□□ 0.37
SNX11-201ENST00000359238 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.38■□□□□ 0.37
SNX11-201ENST00000359238 FAM46DQ8NEK8 389 aa17.38■□□□□ 0.37
SNX11-201ENST00000359238 TWSG1Q9GZX9 223 aa17.38■□□□□ 0.37
SNX11-201ENST00000359238 KCNN2Q9H2S1 579 aa17.38■□□□□ 0.37
SNX11-201ENST00000359238 AHSPQ9NZD4 102 aa17.38■□□□□ 0.37
SNX11-201ENST00000359238 PLEKHB1Q9UF11 243 aaPredicted RBP17.38■□□□□ 0.37
SNX11-201ENST00000359238 A0A1W2PR48 441 aa17.38■□□□□ 0.37
SNX11-201ENST00000359238 TNFRSF21O75509 655 aa17.38■□□□□ 0.37
SNX11-201ENST00000359238 RFPL3O75679 317 aa17.38■□□□□ 0.37
SNX11-201ENST00000359238 CDRT1O95170 752 aa17.38■□□□□ 0.37
SNX11-201ENST00000359238 UBE2IP63279 158 aaKnown RBP17.38■□□□□ 0.37
SNX11-201ENST00000359238 SPHARQ15513 63 aa17.38■□□□□ 0.37
SNX11-201ENST00000359238 SIRT3Q9NTG7 399 aaPredicted RBP17.38■□□□□ 0.37
SNX11-201ENST00000359238 MRPL39Q9NYK5 338 aaKnown RBP17.38■□□□□ 0.37
SNX11-201ENST00000359238 ZNF282Q9UDV7 671 aaPredicted RBP17.38■□□□□ 0.37
SNX11-201ENST00000359238 FBXW2Q9UKT8 454 aa17.38■□□□□ 0.37
SNX11-201ENST00000359238 TLR4O00206 839 aa17.37■□□□□ 0.37
SNX11-201ENST00000359238 BLKP51451 505 aa17.37■□□□□ 0.37
SNX11-201ENST00000359238 PCBP4P57723 403 aaKnown RBP17.37■□□□□ 0.37
SNX11-201ENST00000359238 CTAG1AP78358 180 aa17.37■□□□□ 0.37
SNX11-201ENST00000359238 RGS1Q08116 209 aa17.37■□□□□ 0.37
SNX11-201ENST00000359238 IKBIPQ70UQ0 350 aa17.37■□□□□ 0.37
SNX11-201ENST00000359238 ACOT4Q8N9L9 421 aa17.37■□□□□ 0.37
SNX11-201ENST00000359238 C19orf18Q8NEA5 215 aa17.37■□□□□ 0.37
SNX11-201ENST00000359238 OTUB1Q96FW1 271 aaPredicted RBP17.37■□□□□ 0.37
SNX11-201ENST00000359238 QRFPRQ96P65 431 aa17.37■□□□□ 0.37
SNX11-201ENST00000359238 MAPKAP1Q9BPZ7 522 aa17.37■□□□□ 0.37
SNX11-201ENST00000359238 MARVELD1Q9BSK0 173 aa17.37■□□□□ 0.37
SNX11-201ENST00000359238 ANKRA2Q9H9E1 313 aa17.37■□□□□ 0.37
SNX11-201ENST00000359238 LIN7BQ9HAP6 207 aa17.37■□□□□ 0.37
SNX11-201ENST00000359238 C1GALT1Q9NS00 363 aa17.37■□□□□ 0.37
SNX11-201ENST00000359238 ACTR10Q9NZ32 417 aa17.37■□□□□ 0.37
SNX11-201ENST00000359238 MRPS2Q9Y399 296 aaKnown RBP17.37■□□□□ 0.37
SNX11-201ENST00000359238 TP53BP1Q12888 1972 aaPredicted RBP17.37■□□□□ 0.37
SNX11-201ENST00000359238 CSO75390 466 aaKnown RBP17.37■□□□□ 0.37
SNX11-201ENST00000359238 C8orf89P0DMQ9 161 aa17.37■□□□□ 0.37
SNX11-201ENST00000359238 PRKAR1AP10644 381 aa17.37■□□□□ 0.37
SNX11-201ENST00000359238 TYRP1P17643 537 aa17.37■□□□□ 0.37
SNX11-201ENST00000359238 ABATP80404 500 aa17.37■□□□□ 0.37
SNX11-201ENST00000359238 HNRNPA0Q13151 305 aaKnown RBP17.37■□□□□ 0.37
SNX11-201ENST00000359238 PTGES3Q15185 160 aaKnown RBP17.37■□□□□ 0.37
SNX11-201ENST00000359238 TEX261Q6UWH6 196 aa17.37■□□□□ 0.37
SNX11-201ENST00000359238 PTCHD4Q6ZW05 846 aa17.37■□□□□ 0.37
SNX11-201ENST00000359238 MFSD9Q8NBP5 474 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms