RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 LGALS3BPQ08380 585 aa10.47□□□□□ -0.73
SSU72-202ENST00000359060 ERV3-1Q14264 604 aa10.47□□□□□ -0.73
SSU72-202ENST00000359060 UBXN2BQ14CS0 331 aa10.47□□□□□ -0.73
SSU72-202ENST00000359060 OXA1LQ15070 435 aa10.47□□□□□ -0.73
SSU72-202ENST00000359060 TSTD1Q8NFU3 115 aa10.47□□□□□ -0.73
SSU72-202ENST00000359060 OR7G2Q8NG99 324 aa10.47□□□□□ -0.73
SSU72-202ENST00000359060 OR52I1Q8NGK6 324 aa10.47□□□□□ -0.73
SSU72-202ENST00000359060 OR9A4Q8NGU2 314 aa10.47□□□□□ -0.73
SSU72-202ENST00000359060 LMX1AQ8TE12 382 aa10.47□□□□□ -0.73
SSU72-202ENST00000359060 SLC35A4Q96G79 324 aa10.47□□□□□ -0.73
SSU72-202ENST00000359060 FBXO8Q9NRD0 319 aa10.47□□□□□ -0.73
SSU72-202ENST00000359060 FTSJ1Q9UET6 329 aa10.47□□□□□ -0.73
SSU72-202ENST00000359060 A4GNTQ9UNA3 340 aa10.47□□□□□ -0.73
SSU72-202ENST00000359060 YBX2Q9Y2T7 364 aaKnown RBP10.47□□□□□ -0.73
SSU72-202ENST00000359060 DPM1O60762 260 aa10.46□□□□□ -0.73
SSU72-202ENST00000359060 HIST1H2ABP04908 130 aa10.46□□□□□ -0.73
SSU72-202ENST00000359060 SCG5P05408 212 aa10.46□□□□□ -0.73
SSU72-202ENST00000359060 DBIP07108 87 aaKnown RBP10.46□□□□□ -0.73
SSU72-202ENST00000359060 ZNF3P17036 446 aa10.46□□□□□ -0.73
SSU72-202ENST00000359060 UGT2B10P36537 528 aa10.46□□□□□ -0.73
SSU72-202ENST00000359060 STAT5AP42229 794 aa10.46□□□□□ -0.73
SSU72-202ENST00000359060 TNFRSF4P43489 277 aa10.46□□□□□ -0.73
SSU72-202ENST00000359060 CD97P48960 835 aa10.46□□□□□ -0.73
SSU72-202ENST00000359060 CRYZQ08257 329 aaKnown RBP10.46□□□□□ -0.73
SSU72-202ENST00000359060 ENPP2Q13822 863 aa10.46□□□□□ -0.73
SSU72-202ENST00000359060 DUSP5Q16690 384 aa10.46□□□□□ -0.73
SSU72-202ENST00000359060 DCST2Q5T1A1 773 aa10.46□□□□□ -0.73
SSU72-202ENST00000359060 MRPL2Q5T653 305 aaKnown RBP10.46□□□□□ -0.73
SSU72-202ENST00000359060 MFSD12Q6NUT3 480 aa10.46□□□□□ -0.73
SSU72-202ENST00000359060 HIST3H2AQ7L7L0 130 aa10.46□□□□□ -0.73
SSU72-202ENST00000359060 EGFL6Q8IUX8 553 aa10.46□□□□□ -0.73
SSU72-202ENST00000359060 LAX1Q8IWV1 398 aa10.46□□□□□ -0.73
SSU72-202ENST00000359060 CADM3Q8N126 398 aa10.46□□□□□ -0.73
SSU72-202ENST00000359060 IL17RCQ8NAC3 791 aa10.46□□□□□ -0.73
SSU72-202ENST00000359060 HIST1H2ACQ93077 130 aa10.46□□□□□ -0.73
SSU72-202ENST00000359060 MRPL48Q96GC5 212 aaKnown RBP10.46□□□□□ -0.73
SSU72-202ENST00000359060 ZFP3Q96NJ6 502 aa10.46□□□□□ -0.73
SSU72-202ENST00000359060 CDADC1Q9BWV3 514 aa10.46□□□□□ -0.73
SSU72-202ENST00000359060 C6orf106Q9H6K1 298 aaPredicted RBP10.46□□□□□ -0.73
SSU72-202ENST00000359060 Q9N2J8 555 aa10.46□□□□□ -0.73
SSU72-202ENST00000359060 MKKSQ9NPJ1 570 aaPredicted RBP10.46□□□□□ -0.73
SSU72-202ENST00000359060 CCDC59Q9P031 241 aaKnown RBP10.46□□□□□ -0.73
SSU72-202ENST00000359060 HTTP42858 3142 aa10.46□□□□□ -0.73
SSU72-202ENST00000359060 LOC105369274A0A096LPK9 316 aa10.46□□□□□ -0.74
SSU72-202ENST00000359060 LOC102723532A0A0G2JNH3 316 aa10.46□□□□□ -0.74
SSU72-202ENST00000359060 PROM1O43490 865 aa10.46□□□□□ -0.74
SSU72-202ENST00000359060 PIP5K1CO60331 668 aa10.46□□□□□ -0.74
SSU72-202ENST00000359060 GYPBP06028 91 aa10.46□□□□□ -0.74
SSU72-202ENST00000359060 GRK5P34947 590 aa10.46□□□□□ -0.74
SSU72-202ENST00000359060 SNRPGP62308 76 aaKnown RBP10.46□□□□□ -0.74
SSU72-202ENST00000359060 ZNF544Q6NX49 715 aa10.46□□□□□ -0.74
SSU72-202ENST00000359060 LYSMD2Q8IV50 215 aa10.46□□□□□ -0.74
SSU72-202ENST00000359060 OR4N4Q8N0Y3 316 aa10.46□□□□□ -0.74
SSU72-202ENST00000359060 CDRT4Q8N9R6 151 aa10.46□□□□□ -0.74
SSU72-202ENST00000359060 ERMAPQ96PL5 475 aaPredicted RBP10.46□□□□□ -0.74
SSU72-202ENST00000359060 CDCA4Q9BXL8 241 aa10.46□□□□□ -0.74
SSU72-202ENST00000359060 BEX2Q9BXY8 128 aa10.46□□□□□ -0.74
SSU72-202ENST00000359060 SLC22A4Q9H015 551 aa10.46□□□□□ -0.74
SSU72-202ENST00000359060 OSGIN1Q9UJX0 560 aa10.46□□□□□ -0.74
SSU72-202ENST00000359060 COQ9O75208 318 aa10.46□□□□□ -0.74
SSU72-202ENST00000359060 KLHL18O94889 574 aa10.46□□□□□ -0.74
SSU72-202ENST00000359060 PYCR1P32322 319 aa10.46□□□□□ -0.74
SSU72-202ENST00000359060 TGFBR2P37173 567 aa10.46□□□□□ -0.74
SSU72-202ENST00000359060 ETV5P41161 510 aa10.46□□□□□ -0.74
SSU72-202ENST00000359060 NAA10P41227 235 aaPredicted RBP10.46□□□□□ -0.74
SSU72-202ENST00000359060 ETV1P50549 477 aa10.46□□□□□ -0.74
SSU72-202ENST00000359060 HMGA2P52926 109 aa10.46□□□□□ -0.74
SSU72-202ENST00000359060 MLLT11Q13015 90 aaPredicted RBP10.46□□□□□ -0.74
SSU72-202ENST00000359060 TMEM64Q6YI46 380 aa10.46□□□□□ -0.74
SSU72-202ENST00000359060 CREB3L4Q8TEY5 395 aa10.46□□□□□ -0.74
SSU72-202ENST00000359060 TMEM239Q8WW34 195 aa10.46□□□□□ -0.74
SSU72-202ENST00000359060 NDC1Q9BTX1 674 aa10.46□□□□□ -0.74
SSU72-202ENST00000359060 NDEL1Q9GZM8 345 aa10.46□□□□□ -0.74
SSU72-202ENST00000359060 OR52D1Q9H346 318 aa10.46□□□□□ -0.74
SSU72-202ENST00000359060 TRIM36Q9NQ86 728 aa10.46□□□□□ -0.74
SSU72-202ENST00000359060 IKZF2Q9UKS7 526 aa10.46□□□□□ -0.74
SSU72-202ENST00000359060 SLC17A4Q9Y2C5 497 aa10.46□□□□□ -0.74
SSU72-202ENST00000359060 ASB4Q9Y574 426 aa10.46□□□□□ -0.74
SSU72-202ENST00000359060 NOTCH4Q99466 2003 aa10.45□□□□□ -0.74
SSU72-202ENST00000359060 TRAV27A0A087WT01 109 aa10.45□□□□□ -0.74
SSU72-202ENST00000359060 H3BSH0 61 aa10.45□□□□□ -0.74
SSU72-202ENST00000359060 ACP2P11117 423 aa10.45□□□□□ -0.74
SSU72-202ENST00000359060 RPS25P62851 125 aaKnown RBP10.45□□□□□ -0.74
SSU72-202ENST00000359060 RAB40BQ12829 278 aa10.45□□□□□ -0.74
SSU72-202ENST00000359060 GDPGP1Q6ZNW5 385 aa10.45□□□□□ -0.74
SSU72-202ENST00000359060 GPR135Q8IZ08 494 aa10.45□□□□□ -0.74
SSU72-202ENST00000359060 SPRYD4Q8WW59 207 aaPredicted RBP10.45□□□□□ -0.74
SSU72-202ENST00000359060 BTBD2Q9BX70 525 aa10.45□□□□□ -0.74
SSU72-202ENST00000359060 PLA2G12AQ9BZM1 189 aa10.45□□□□□ -0.74
SSU72-202ENST00000359060 OR8D2Q9GZM6 311 aa10.45□□□□□ -0.74
SSU72-202ENST00000359060 CPNE5Q9HCH3 593 aa10.45□□□□□ -0.74
SSU72-202ENST00000359060 SCML1Q9UN30 329 aa10.45□□□□□ -0.74
SSU72-202ENST00000359060 HEATR5BQ9P2D3 2071 aa10.45□□□□□ -0.74
SSU72-202ENST00000359060 RHPN2P1A8MT19 583 aa10.45□□□□□ -0.74
SSU72-202ENST00000359060 BLOC1S5-TXNDC5H3BN57 136 aa10.45□□□□□ -0.74
SSU72-202ENST00000359060 NTN1O95631 604 aa10.45□□□□□ -0.74
SSU72-202ENST00000359060 SEMG1P04279 462 aa10.45□□□□□ -0.74
SSU72-202ENST00000359060 EEF1A2Q05639 463 aaKnown RBP10.45□□□□□ -0.74
SSU72-202ENST00000359060 PGGHGQ32M88 737 aa10.45□□□□□ -0.74
SSU72-202ENST00000359060 ALG10BQ5I7T1 473 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms