RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 RPL3LQ92901 407 aaKnown RBP8.31□□□□□ -1.08
COL6A6-201ENST00000358511 ARPC5LQ9BPX5 153 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 C20orf85Q9H1P6 137 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 NDRG2Q9UN36 371 aaKnown RBP8.31□□□□□ -1.08
COL6A6-201ENST00000358511 UGDHO60701 494 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 ACVRL1P37023 503 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 ERVPABLB-1P60509 514 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 ADPRMQ3LIE5 342 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 SGPP2Q8IWX5 399 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 RADILQ96JH8 1075 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 DEC1Q9P2X7 70 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 PCDHGA2Q9Y5H1 932 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 A0A1W2PQ45 241 aaPredicted RBP8.31□□□□□ -1.08
COL6A6-201ENST00000358511 A0A1W2PQY0 241 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 RGNQ15493 299 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 FUT10Q6P4F1 479 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 SLC30A7Q8NEW0 376 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 STEAP2Q8NFT2 490 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.31□□□□□ -1.08
COL6A6-201ENST00000358511 ABRACLQ9P1F3 81 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 ADAM18Q9Y3Q7 739 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 PCDHA9Q9Y5H5 950 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 DOT1LQ8TEK3 1739 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 MEGF11A6BM72 1044 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 UBL3O95164 117 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 TP53P04637 393 aaPredicted RBP8.31□□□□□ -1.08
COL6A6-201ENST00000358511 ACP2P11117 423 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 GP1BBP13224 206 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 GNSP15586 552 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 CAV2P51636 162 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 TANGO2Q6ICL3 276 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 SLC51BQ86UW2 128 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 OR2A12Q8NGT7 310 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 OR52P1PQ8NH57 321 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 ZNF417Q8TAU3 575 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 SCARB1Q8WTV0 552 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 RNF141Q8WVD5 230 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 SLC35B4Q969S0 331 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 FYTTD1Q96QD9 318 aaKnown RBP8.31□□□□□ -1.08
COL6A6-201ENST00000358511 PSD2Q9BQI7 771 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 GSX2Q9BZM3 304 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 BCAS3Q9H6U6 928 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 GPATCH2Q9NW75 528 aa8.31□□□□□ -1.08
COL6A6-201ENST00000358511 MTX2O75431 263 aa8.3□□□□□ -1.08
COL6A6-201ENST00000358511 EPHX1P07099 455 aa8.3□□□□□ -1.08
COL6A6-201ENST00000358511 SGSHP51688 502 aa8.3□□□□□ -1.08
COL6A6-201ENST00000358511 TREML2Q5T2D2 321 aa8.3□□□□□ -1.08
COL6A6-201ENST00000358511 BEND4Q6ZU67 534 aa8.3□□□□□ -1.08
COL6A6-201ENST00000358511 ZNF679Q8IYX0 411 aa8.3□□□□□ -1.08
COL6A6-201ENST00000358511 ADAMTS14Q8WXS8 1223 aa8.3□□□□□ -1.08
COL6A6-201ENST00000358511 SLC25A46Q96AG3 418 aa8.3□□□□□ -1.08
COL6A6-201ENST00000358511 SYT3Q9BQG1 590 aa8.3□□□□□ -1.08
COL6A6-201ENST00000358511 TCEAL2Q9H3H9 227 aaPredicted RBP8.3□□□□□ -1.08
COL6A6-201ENST00000358511 ZDHHC4Q9NPG8 344 aa8.3□□□□□ -1.08
COL6A6-201ENST00000358511 PHIPQ8WWQ0 1821 aa8.3□□□□□ -1.08
COL6A6-201ENST00000358511 ZCWPW2A0A1B0GU75 182 aa8.3□□□□□ -1.08
COL6A6-201ENST00000358511 GABRPO00591 440 aa8.3□□□□□ -1.08
COL6A6-201ENST00000358511 RAF1P04049 648 aa8.3□□□□□ -1.08
COL6A6-201ENST00000358511 TGM4P49221 684 aa8.3□□□□□ -1.08
COL6A6-201ENST00000358511 WDR5P61964 334 aaKnown RBP8.3□□□□□ -1.08
COL6A6-201ENST00000358511 POU6F2P78424 691 aaPredicted RBP8.3□□□□□ -1.08
COL6A6-201ENST00000358511 SLC22A25Q6T423 547 aa8.3□□□□□ -1.08
COL6A6-201ENST00000358511 GPR26Q8NDV2 337 aa8.3□□□□□ -1.08
COL6A6-201ENST00000358511 SLAMF9Q96A28 289 aa8.3□□□□□ -1.08
COL6A6-201ENST00000358511 UBE2J1Q9Y385 318 aaPredicted RBP8.3□□□□□ -1.08
COL6A6-201ENST00000358511 ATRXP46100 2492 aa8.3□□□□□ -1.08
COL6A6-201ENST00000358511 MN1Q10571 1320 aaPredicted RBP8.3□□□□□ -1.08
COL6A6-201ENST00000358511 SLC16A6O15403 523 aa8.3□□□□□ -1.08
COL6A6-201ENST00000358511 EMC8O43402 210 aa8.3□□□□□ -1.08
COL6A6-201ENST00000358511 HTRA4P83105 476 aaPredicted RBP8.3□□□□□ -1.08
COL6A6-201ENST00000358511 ECH1Q13011 328 aa8.3□□□□□ -1.08
COL6A6-201ENST00000358511 DGKZQ13574 1117 aa8.3□□□□□ -1.08
COL6A6-201ENST00000358511 CARD16Q5EG05 197 aa8.3□□□□□ -1.08
COL6A6-201ENST00000358511 MANEALQ5VSG8 457 aa8.3□□□□□ -1.08
COL6A6-201ENST00000358511 TPRG1Q6ZUI0 275 aa8.3□□□□□ -1.08
COL6A6-201ENST00000358511 HMGB4Q8WW32 186 aa8.3□□□□□ -1.08
COL6A6-201ENST00000358511 UHRF1Q96T88 793 aaPredicted RBP8.3□□□□□ -1.08
COL6A6-201ENST00000358511 SPIN2AQ99865 258 aa8.3□□□□□ -1.08
COL6A6-201ENST00000358511 SPIN2BQ9BPZ2 258 aa8.3□□□□□ -1.08
COL6A6-201ENST00000358511 NIPSNAP3BQ9BS92 247 aa8.3□□□□□ -1.08
COL6A6-201ENST00000358511 TGIF2Q9GZN2 237 aa8.3□□□□□ -1.08
COL6A6-201ENST00000358511 DOCK9Q9BZ29 2069 aa8.3□□□□□ -1.08
COL6A6-201ENST00000358511 ONECUT3O60422 494 aaPredicted RBP8.3□□□□□ -1.08
COL6A6-201ENST00000358511 MAOBP27338 520 aa8.3□□□□□ -1.08
COL6A6-201ENST00000358511 GRPRP30550 384 aa8.3□□□□□ -1.08
COL6A6-201ENST00000358511 PGGT1BP53609 377 aa8.3□□□□□ -1.08
COL6A6-201ENST00000358511 CLRN1P58418 232 aa8.3□□□□□ -1.08
COL6A6-201ENST00000358511 BTG1P62324 171 aa8.3□□□□□ -1.08
COL6A6-201ENST00000358511 CLDN10P78369 228 aa8.3□□□□□ -1.08
COL6A6-201ENST00000358511 ST7LQ8TDW4 575 aa8.3□□□□□ -1.08
COL6A6-201ENST00000358511 MSRAQ9UJ68 235 aa8.3□□□□□ -1.08
COL6A6-201ENST00000358511 BOLA1Q9Y3E2 137 aa8.3□□□□□ -1.08
COL6A6-201ENST00000358511 ARNTLO00327 626 aa8.3□□□□□ -1.08
COL6A6-201ENST00000358511 INHAP05111 366 aa8.3□□□□□ -1.08
COL6A6-201ENST00000358511 LAMP1P11279 417 aa8.3□□□□□ -1.08
COL6A6-201ENST00000358511 CTHP32929 405 aa8.3□□□□□ -1.08
COL6A6-201ENST00000358511 IDUAP35475 653 aa8.3□□□□□ -1.08
COL6A6-201ENST00000358511 SEMG2Q02383 582 aa8.3□□□□□ -1.08
COL6A6-201ENST00000358511 ARL6IP1Q15041 203 aa8.3□□□□□ -1.08
COL6A6-201ENST00000358511 PLK5Q496M5 336 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms