RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 LCORQ96JN0 433 aaPredicted RBP9.25□□□□□ -0.93
CHD3-202ENST00000358181 IL17FQ96PD4 163 aa9.25□□□□□ -0.93
CHD3-202ENST00000358181 COQ10BQ9H8M1 238 aa9.25□□□□□ -0.93
CHD3-202ENST00000358181 ITM2CQ9NQX7 267 aa9.25□□□□□ -0.93
CHD3-202ENST00000358181 SGK494L7N484 410 aa9.25□□□□□ -0.93
CHD3-202ENST00000358181 VNN1O95497 513 aa9.25□□□□□ -0.93
CHD3-202ENST00000358181 SCGB1C2P0DMR2 95 aa9.25□□□□□ -0.93
CHD3-202ENST00000358181 PRKACGP22612 351 aa9.25□□□□□ -0.93
CHD3-202ENST00000358181 PRKXP51817 358 aa9.25□□□□□ -0.93
CHD3-202ENST00000358181 ARSFP54793 590 aa9.25□□□□□ -0.93
CHD3-202ENST00000358181 TMEM115Q12893 351 aaPredicted RBP9.25□□□□□ -0.93
CHD3-202ENST00000358181 MAB21L1Q13394 359 aa9.25□□□□□ -0.93
CHD3-202ENST00000358181 APOFQ13790 326 aa9.25□□□□□ -0.93
CHD3-202ENST00000358181 DRICH1Q6PGQ1 229 aaPredicted RBP9.25□□□□□ -0.93
CHD3-202ENST00000358181 FAM111BQ6SJ93 734 aa9.25□□□□□ -0.93
CHD3-202ENST00000358181 ZNF705AQ6ZN79 300 aaPredicted RBP9.25□□□□□ -0.93
CHD3-202ENST00000358181 OR1M1Q8NGA1 313 aa9.25□□□□□ -0.93
CHD3-202ENST00000358181 ZNF516Q92618 1163 aa9.25□□□□□ -0.93
CHD3-202ENST00000358181 PINX1Q96BK5 328 aaKnown RBP9.25□□□□□ -0.93
CHD3-202ENST00000358181 MICU1Q9BPX6 476 aa9.25□□□□□ -0.93
CHD3-202ENST00000358181 PINK1Q9BXM7 581 aa9.25□□□□□ -0.93
CHD3-202ENST00000358181 TTYH3Q9C0H2 523 aa9.25□□□□□ -0.93
CHD3-202ENST00000358181 UNKLQ9H9P5 680 aaKnown RBP9.25□□□□□ -0.93
CHD3-202ENST00000358181 SACM1LQ9NTJ5 587 aa9.25□□□□□ -0.93
CHD3-202ENST00000358181 ANKMY1Q9P2S6 941 aa9.25□□□□□ -0.93
CHD3-202ENST00000358181 COL1A2P08123 1366 aa9.25□□□□□ -0.93
CHD3-202ENST00000358181 J3KR12 359 aa9.25□□□□□ -0.93
CHD3-202ENST00000358181 NFKBIEO00221 500 aa9.25□□□□□ -0.93
CHD3-202ENST00000358181 BPIP17213 487 aa9.25□□□□□ -0.93
CHD3-202ENST00000358181 IL1RNP18510 177 aa9.25□□□□□ -0.93
CHD3-202ENST00000358181 MMP8P22894 467 aa9.25□□□□□ -0.93
CHD3-202ENST00000358181 MC3RP41968 323 aa9.25□□□□□ -0.93
CHD3-202ENST00000358181 ARHGAP11BQ3KRB8 267 aa9.25□□□□□ -0.93
CHD3-202ENST00000358181 BRAT1Q6PJG6 821 aa9.25□□□□□ -0.93
CHD3-202ENST00000358181 KBTBD6Q86V97 674 aa9.25□□□□□ -0.93
CHD3-202ENST00000358181 SLC22A16Q86VW1 577 aa9.25□□□□□ -0.93
CHD3-202ENST00000358181 BOD1Q96IK1 185 aa9.25□□□□□ -0.93
CHD3-202ENST00000358181 TM7SF3Q9NS93 570 aa9.25□□□□□ -0.93
CHD3-202ENST00000358181 NAGKQ9UJ70 344 aa9.25□□□□□ -0.93
CHD3-202ENST00000358181 TCRBV7S3A2A0A539 114 aa9.25□□□□□ -0.93
CHD3-202ENST00000358181 M0R1B8 84 aa9.25□□□□□ -0.93
CHD3-202ENST00000358181 F3P13726 295 aa9.25□□□□□ -0.93
CHD3-202ENST00000358181 PRDX3P30048 256 aaKnown RBP9.25□□□□□ -0.93
CHD3-202ENST00000358181 SNCAP37840 140 aa9.25□□□□□ -0.93
CHD3-202ENST00000358181 LIPKQ5VXJ0 399 aa9.25□□□□□ -0.93
CHD3-202ENST00000358181 LINC00471Q8N535 108 aa9.25□□□□□ -0.93
CHD3-202ENST00000358181 OR7G2Q8NG99 324 aa9.25□□□□□ -0.93
CHD3-202ENST00000358181 ACMSDQ8TDX5 336 aa9.25□□□□□ -0.93
CHD3-202ENST00000358181 TBC1D20Q96BZ9 403 aa9.25□□□□□ -0.93
CHD3-202ENST00000358181 SMIM12Q96EX1 92 aa9.25□□□□□ -0.93
CHD3-202ENST00000358181 MRIQ9BWK5 157 aa9.25□□□□□ -0.93
CHD3-202ENST00000358181 OR10A5Q9H207 317 aa9.25□□□□□ -0.93
CHD3-202ENST00000358181 OR10A2Q9H208 303 aa9.25□□□□□ -0.93
CHD3-202ENST00000358181 NSG1A0A0A6YYJ2 146 aa9.25□□□□□ -0.93
CHD3-202ENST00000358181 C4orf47A7E2U8 309 aa9.25□□□□□ -0.93
CHD3-202ENST00000358181 CHRNB2P17787 502 aa9.25□□□□□ -0.93
CHD3-202ENST00000358181 CDKN2BP42772 138 aa9.25□□□□□ -0.93
CHD3-202ENST00000358181 SOWAHAQ2M3V2 549 aa9.25□□□□□ -0.93
CHD3-202ENST00000358181 VWA2Q5GFL6 755 aa9.25□□□□□ -0.93
CHD3-202ENST00000358181 FRG2Q64ET8 278 aa9.25□□□□□ -0.93
CHD3-202ENST00000358181 OR10X1Q8NGY0 326 aa9.25□□□□□ -0.93
CHD3-202ENST00000358181 FAM46AQ96IP4 442 aaKnown RBP9.25□□□□□ -0.93
CHD3-202ENST00000358181 HSH2DQ96JZ2 352 aa9.25□□□□□ -0.93
CHD3-202ENST00000358181 FRG2BQ96QU4 278 aa9.25□□□□□ -0.93
CHD3-202ENST00000358181 LPAR4Q99677 370 aa9.25□□□□□ -0.93
CHD3-202ENST00000358181 RNPEPL1Q9HAU8 725 aa9.25□□□□□ -0.93
CHD3-202ENST00000358181 OLAHQ9NV23 265 aa9.25□□□□□ -0.93
CHD3-202ENST00000358181 ONECUT1Q9UBC0 465 aa9.25□□□□□ -0.93
CHD3-202ENST00000358181 CLCF1Q9UBD9 225 aa9.25□□□□□ -0.93
CHD3-202ENST00000358181 RGPD8O14715 1765 aaPredicted RBP9.25□□□□□ -0.93
CHD3-202ENST00000358181 DVL2O14641 736 aa9.24□□□□□ -0.93
CHD3-202ENST00000358181 SNX3O60493 162 aa9.24□□□□□ -0.93
CHD3-202ENST00000358181 BEST1O76090 585 aa9.24□□□□□ -0.93
CHD3-202ENST00000358181 ITGB2P05107 769 aa9.24□□□□□ -0.93
CHD3-202ENST00000358181 RAP2AP10114 183 aa9.24□□□□□ -0.93
CHD3-202ENST00000358181 DIO3P55073 304 aa9.24□□□□□ -0.93
CHD3-202ENST00000358181 CTXN1P60606 82 aa9.24□□□□□ -0.93
CHD3-202ENST00000358181 TGFBR3Q03167 851 aa9.24□□□□□ -0.93
CHD3-202ENST00000358181 DCAF12Q5T6F0 453 aa9.24□□□□□ -0.93
CHD3-202ENST00000358181 TPGS2Q68CL5 300 aa9.24□□□□□ -0.93
CHD3-202ENST00000358181 OR5AS1Q8N127 324 aa9.24□□□□□ -0.93
CHD3-202ENST00000358181 OR51L1Q8NGJ5 315 aa9.24□□□□□ -0.93
CHD3-202ENST00000358181 HPSE2Q8WWQ2 592 aa9.24□□□□□ -0.93
CHD3-202ENST00000358181 ITPAQ9BY32 194 aa9.24□□□□□ -0.93
CHD3-202ENST00000358181 QPCTLQ9NXS2 382 aa9.24□□□□□ -0.93
CHD3-202ENST00000358181 DCDC2BA2VCK2 349 aa9.24□□□□□ -0.93
CHD3-202ENST00000358181 BTNL10A8MVZ5 291 aa9.24□□□□□ -0.93
CHD3-202ENST00000358181 TMEM63AO94886 807 aa9.24□□□□□ -0.93
CHD3-202ENST00000358181 SIX3O95343 332 aaPredicted RBP9.24□□□□□ -0.93
CHD3-202ENST00000358181 GPR143P51810 404 aa9.24□□□□□ -0.93
CHD3-202ENST00000358181 ERV3-1Q14264 604 aa9.24□□□□□ -0.93
CHD3-202ENST00000358181 LHFPL3Q86UP9 236 aa9.24□□□□□ -0.93
CHD3-202ENST00000358181 GLB1L3Q8NCI6 653 aaPredicted RBP9.24□□□□□ -0.93
CHD3-202ENST00000358181 C2orf15Q8WU43 125 aaKnown RBP9.24□□□□□ -0.93
CHD3-202ENST00000358181 TECTBQ96PL2 329 aa9.24□□□□□ -0.93
CHD3-202ENST00000358181 UHRF2Q96PU4 802 aa9.24□□□□□ -0.93
CHD3-202ENST00000358181 PCDHAC1Q9H158 963 aa9.24□□□□□ -0.93
CHD3-202ENST00000358181 WDR6Q9NNW5 1121 aaKnown RBP9.24□□□□□ -0.93
CHD3-202ENST00000358181 DLGAP4Q9Y2H0 992 aa9.24□□□□□ -0.93
CHD3-202ENST00000358181 HS3ST4Q9Y661 456 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms