RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 KCNE5Q9UJ90 142 aa13.64□□□□□ -0.23
CCNE1-202ENST00000357943 CNOT11Q9UKZ1 510 aaKnown RBP13.64□□□□□ -0.23
CCNE1-202ENST00000357943 AP3M1Q9Y2T2 418 aa13.64□□□□□ -0.23
CCNE1-202ENST00000357943 ELOVL7A1L3X0 281 aa13.63□□□□□ -0.23
CCNE1-202ENST00000357943 C5orf58C9J3I9 102 aa13.63□□□□□ -0.23
CCNE1-202ENST00000357943 NPIPB9F8W1W9 429 aa13.63□□□□□ -0.23
CCNE1-202ENST00000357943 G3V3Y1 287 aa13.63□□□□□ -0.23
CCNE1-202ENST00000357943 DNAJC8O75937 253 aaPredicted RBP13.63□□□□□ -0.23
CCNE1-202ENST00000357943 PGM3O95394 542 aa13.63□□□□□ -0.23
CCNE1-202ENST00000357943 OXSR1O95747 527 aaPredicted RBP13.63□□□□□ -0.23
CCNE1-202ENST00000357943 TCN1P20061 433 aaPredicted RBP13.63□□□□□ -0.23
CCNE1-202ENST00000357943 EVI2BP34910 448 aa13.63□□□□□ -0.23
CCNE1-202ENST00000357943 MSX2P35548 267 aaPredicted RBP13.63□□□□□ -0.23
CCNE1-202ENST00000357943 CASP3P42574 277 aa13.63□□□□□ -0.23
CCNE1-202ENST00000357943 RNF144AP50876 292 aaPredicted RBP13.63□□□□□ -0.23
CCNE1-202ENST00000357943 CEACAM7Q14002 265 aa13.63□□□□□ -0.23
CCNE1-202ENST00000357943 GNA13Q14344 377 aa13.63□□□□□ -0.23
CCNE1-202ENST00000357943 MAPK14Q16539 360 aa13.63□□□□□ -0.23
CCNE1-202ENST00000357943 AP1ARQ63HQ0 302 aa13.63□□□□□ -0.23
CCNE1-202ENST00000357943 REEP3Q6NUK4 255 aa13.63□□□□□ -0.23
CCNE1-202ENST00000357943 ASRGL1Q7L266 308 aa13.63□□□□□ -0.23
CCNE1-202ENST00000357943 ZNF619Q8N2I2 560 aa13.63□□□□□ -0.23
CCNE1-202ENST00000357943 METTL25Q8N6Q8 603 aa13.63□□□□□ -0.23
CCNE1-202ENST00000357943 HIPK4Q8NE63 616 aa13.63□□□□□ -0.23
CCNE1-202ENST00000357943 SECISBP2Q96T21 854 aaKnown RBP13.63□□□□□ -0.23
CCNE1-202ENST00000357943 MFRPQ9BY79 579 aa13.63□□□□□ -0.23
CCNE1-202ENST00000357943 RTN4RQ9BZR6 473 aa13.63□□□□□ -0.23
CCNE1-202ENST00000357943 PROK2Q9HC23 129 aa13.63□□□□□ -0.23
CCNE1-202ENST00000357943 GALNT9Q9HCQ5 603 aa13.63□□□□□ -0.23
CCNE1-202ENST00000357943 BCL2L10Q9HD36 194 aa13.63□□□□□ -0.23
CCNE1-202ENST00000357943 POLE3Q9NRF9 147 aa13.63□□□□□ -0.23
CCNE1-202ENST00000357943 UBQLN4Q9NRR5 601 aa13.63□□□□□ -0.23
CCNE1-202ENST00000357943 CALML5Q9NZT1 146 aa13.63□□□□□ -0.23
CCNE1-202ENST00000357943 CD300AQ9UGN4 299 aa13.63□□□□□ -0.23
CCNE1-202ENST00000357943 PCDHGA10Q9Y5H3 936 aa13.63□□□□□ -0.23
CCNE1-202ENST00000357943 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.63□□□□□ -0.23
CCNE1-202ENST00000357943 DSPPQ9NZW4 1301 aa13.63□□□□□ -0.23
CCNE1-202ENST00000357943 CACNA1BQ00975 2339 aa13.62□□□□□ -0.23
CCNE1-202ENST00000357943 A0A0G2JPF8 293 aa13.62□□□□□ -0.23
CCNE1-202ENST00000357943 C2orf72A6NCS6 295 aa13.62□□□□□ -0.23
CCNE1-202ENST00000357943 C17orf51A8MQB3 221 aa13.62□□□□□ -0.23
CCNE1-202ENST00000357943 HNRNPCL2B2RXH8 293 aa13.62□□□□□ -0.23
CCNE1-202ENST00000357943 HNRNPCL3B7ZW38 293 aa13.62□□□□□ -0.23
CCNE1-202ENST00000357943 FADS1O60427 444 aa13.62□□□□□ -0.23
CCNE1-202ENST00000357943 GCM2O75603 506 aaPredicted RBP13.62□□□□□ -0.23
CCNE1-202ENST00000357943 SORBS2O94875 1100 aaKnown RBP13.62□□□□□ -0.23
CCNE1-202ENST00000357943 SP1P08047 785 aa13.62□□□□□ -0.23
CCNE1-202ENST00000357943 GUSBP08236 651 aa13.62□□□□□ -0.23
CCNE1-202ENST00000357943 HNRNPCL4P0DMR1 293 aa13.62□□□□□ -0.23
CCNE1-202ENST00000357943 TBXA2RP21731 343 aa13.62□□□□□ -0.23
CCNE1-202ENST00000357943 LCN1P31025 176 aa13.62□□□□□ -0.23
CCNE1-202ENST00000357943 PTGDSP41222 190 aa13.62□□□□□ -0.23
CCNE1-202ENST00000357943 RASSF2P50749 326 aa13.62□□□□□ -0.23
CCNE1-202ENST00000357943 ATP12AP54707 1039 aa13.62□□□□□ -0.23
CCNE1-202ENST00000357943 GPR85P60893 370 aa13.62□□□□□ -0.23
CCNE1-202ENST00000357943 LY6DQ14210 128 aa13.62□□□□□ -0.23
CCNE1-202ENST00000357943 DNAL1Q4LDG9 190 aa13.62□□□□□ -0.23
CCNE1-202ENST00000357943 ZNF766Q5HY98 468 aa13.62□□□□□ -0.23
CCNE1-202ENST00000357943 SAMD4BQ5PRF9 694 aaKnown RBP13.62□□□□□ -0.23
CCNE1-202ENST00000357943 SLC25A25Q6KCM7 469 aa13.62□□□□□ -0.23
CCNE1-202ENST00000357943 Q6ZS92 163 aa13.62□□□□□ -0.23
CCNE1-202ENST00000357943 GALNTL5Q7Z4T8 443 aa13.62□□□□□ -0.23
CCNE1-202ENST00000357943 MICU2Q8IYU8 434 aa13.62□□□□□ -0.23
CCNE1-202ENST00000357943 FBXW8Q8N3Y1 598 aa13.62□□□□□ -0.23
CCNE1-202ENST00000357943 POGLUT1Q8NBL1 392 aa13.62□□□□□ -0.23
CCNE1-202ENST00000357943 RNF138Q8WVD3 245 aa13.62□□□□□ -0.23
CCNE1-202ENST00000357943 CLPTM1LQ96KA5 538 aa13.62□□□□□ -0.23
CCNE1-202ENST00000357943 KCTD14Q9BQ13 255 aaPredicted RBP13.62□□□□□ -0.23
CCNE1-202ENST00000357943 THTPAQ9BU02 230 aa13.62□□□□□ -0.23
CCNE1-202ENST00000357943 METTL7AQ9H8H3 244 aa13.62□□□□□ -0.23
CCNE1-202ENST00000357943 MTHFD2LQ9H903 347 aaPredicted RBP13.62□□□□□ -0.23
CCNE1-202ENST00000357943 TIMMDC1Q9NPL8 285 aa13.62□□□□□ -0.23
CCNE1-202ENST00000357943 DEPPQ9NTK1 212 aa13.62□□□□□ -0.23
CCNE1-202ENST00000357943 KLRF1Q9NZS2 232 aa13.62□□□□□ -0.23
CCNE1-202ENST00000357943 CNIH4Q9P003 139 aa13.62□□□□□ -0.23
CCNE1-202ENST00000357943 EGFL7Q9UHF1 273 aa13.62□□□□□ -0.23
CCNE1-202ENST00000357943 A0A0G2JMM0 328 aa13.61□□□□□ -0.23
CCNE1-202ENST00000357943 A0A1W2PPB8 328 aa13.61□□□□□ -0.23
CCNE1-202ENST00000357943 A0A1W2PRS3 328 aa13.61□□□□□ -0.23
CCNE1-202ENST00000357943 PRAMEF25A6NGN4 478 aa13.61□□□□□ -0.23
CCNE1-202ENST00000357943 KIR3DP1A8MWS1 328 aa13.61□□□□□ -0.23
CCNE1-202ENST00000357943 ADAM10O14672 748 aa13.61□□□□□ -0.23
CCNE1-202ENST00000357943 DNAJA2O60884 412 aa13.61□□□□□ -0.23
CCNE1-202ENST00000357943 PDE5AO76074 875 aa13.61□□□□□ -0.23
CCNE1-202ENST00000357943 P04436 131 aa13.61□□□□□ -0.23
CCNE1-202ENST00000357943 NGFRP08138 427 aa13.61□□□□□ -0.23
CCNE1-202ENST00000357943 CD46P15529 392 aa13.61□□□□□ -0.23
CCNE1-202ENST00000357943 PCGF2P35227 344 aa13.61□□□□□ -0.23
CCNE1-202ENST00000357943 PCBP3P57721 371 aaKnown RBP13.61□□□□□ -0.23
CCNE1-202ENST00000357943 INPP5JQ15735 1006 aaPredicted RBP13.61□□□□□ -0.23
CCNE1-202ENST00000357943 PDZK1Q5T2W1 519 aa13.61□□□□□ -0.23
CCNE1-202ENST00000357943 PRAMEF8Q5VWM4 474 aa13.61□□□□□ -0.23
CCNE1-202ENST00000357943 PRAMEF7Q5VXH5 474 aa13.61□□□□□ -0.23
CCNE1-202ENST00000357943 ERICH5Q6P6B1 374 aa13.61□□□□□ -0.23
CCNE1-202ENST00000357943 TMEM81Q6P7N7 255 aa13.61□□□□□ -0.23
CCNE1-202ENST00000357943 MARCH3Q86UD3 253 aa13.61□□□□□ -0.23
CCNE1-202ENST00000357943 ZNF614Q8N883 585 aa13.61□□□□□ -0.23
CCNE1-202ENST00000357943 BBS10Q8TAM1 723 aa13.61□□□□□ -0.23
CCNE1-202ENST00000357943 SCMH1Q96GD3 660 aa13.61□□□□□ -0.23
CCNE1-202ENST00000357943 HOXD1Q9GZZ0 328 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms