RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 HMGN2P05204 90 aaKnown RBP12.46□□□□□ -0.41
SCN8A-202ENST00000355133 BMP1P13497 986 aa12.46□□□□□ -0.41
SCN8A-202ENST00000355133 ETV4P43268 484 aa12.46□□□□□ -0.41
SCN8A-202ENST00000355133 SGSHP51688 502 aa12.46□□□□□ -0.41
SCN8A-202ENST00000355133 ERV3-1Q14264 604 aa12.46□□□□□ -0.41
SCN8A-202ENST00000355133 PLGLAQ15195 96 aa12.46□□□□□ -0.41
SCN8A-202ENST00000355133 SMAD2Q15796 467 aaKnown RBP12.46□□□□□ -0.41
SCN8A-202ENST00000355133 TMEM184AQ6ZMB5 413 aa12.46□□□□□ -0.41
SCN8A-202ENST00000355133 CPXM2Q8N436 756 aa12.46□□□□□ -0.41
SCN8A-202ENST00000355133 TMEM239Q8WW34 195 aa12.46□□□□□ -0.41
SCN8A-202ENST00000355133 TANKQ92844 425 aa12.46□□□□□ -0.41
SCN8A-202ENST00000355133 C16orf58Q96GQ5 468 aa12.46□□□□□ -0.41
SCN8A-202ENST00000355133 MAELQ96JY0 434 aaKnown RBP12.46□□□□□ -0.41
SCN8A-202ENST00000355133 POT1Q9NUX5 634 aa12.46□□□□□ -0.41
SCN8A-202ENST00000355133 KNDC1Q76NI1 1749 aa12.46□□□□□ -0.41
SCN8A-202ENST00000355133 DCDC2BA2VCK2 349 aa12.46□□□□□ -0.41
SCN8A-202ENST00000355133 GDF1P27539 372 aa12.46□□□□□ -0.41
SCN8A-202ENST00000355133 ERP29P30040 261 aaKnown RBP12.46□□□□□ -0.41
SCN8A-202ENST00000355133 CCR7P32248 378 aa12.46□□□□□ -0.41
SCN8A-202ENST00000355133 SLC6A8P48029 635 aa12.46□□□□□ -0.41
SCN8A-202ENST00000355133 CTBSQ01459 385 aa12.46□□□□□ -0.41
SCN8A-202ENST00000355133 NKPD1Q17RQ9 610 aa12.46□□□□□ -0.41
SCN8A-202ENST00000355133 PIP5KL1Q5T9C9 394 aa12.46□□□□□ -0.41
SCN8A-202ENST00000355133 GPR157Q5UAW9 335 aa12.46□□□□□ -0.41
SCN8A-202ENST00000355133 MRPL21Q7Z2W9 205 aaKnown RBP12.46□□□□□ -0.41
SCN8A-202ENST00000355133 CLEC1AQ8NC01 280 aa12.46□□□□□ -0.41
SCN8A-202ENST00000355133 GLYATL2Q8WU03 294 aa12.46□□□□□ -0.41
SCN8A-202ENST00000355133 RRNAD1Q96FB5 475 aaKnown RBP12.46□□□□□ -0.41
SCN8A-202ENST00000355133 ZNF649Q9BS31 505 aa12.46□□□□□ -0.41
SCN8A-202ENST00000355133 NXF5Q9H1B4 397 aaKnown RBP12.46□□□□□ -0.41
SCN8A-202ENST00000355133 RANBP3Q9H6Z4 567 aaPredicted RBP12.46□□□□□ -0.41
SCN8A-202ENST00000355133 CREBL2O60519 120 aaPredicted RBP12.46□□□□□ -0.42
SCN8A-202ENST00000355133 CD34P28906 385 aa12.46□□□□□ -0.42
SCN8A-202ENST00000355133 TNFRSF4P43489 277 aa12.46□□□□□ -0.42
SCN8A-202ENST00000355133 PSPHP78330 225 aa12.46□□□□□ -0.42
SCN8A-202ENST00000355133 TAP2Q03519 686 aa12.46□□□□□ -0.42
SCN8A-202ENST00000355133 MARCH8Q5T0T0 291 aa12.46□□□□□ -0.42
SCN8A-202ENST00000355133 HAGHLQ6PII5 290 aaPredicted RBP12.46□□□□□ -0.42
SCN8A-202ENST00000355133 GSG1LQ6UXU4 331 aa12.46□□□□□ -0.42
SCN8A-202ENST00000355133 ISG20Q96AZ6 181 aaKnown RBP12.46□□□□□ -0.42
SCN8A-202ENST00000355133 ACTR6Q9GZN1 396 aa12.46□□□□□ -0.42
SCN8A-202ENST00000355133 CPNE7Q9UBL6 633 aa12.46□□□□□ -0.42
SCN8A-202ENST00000355133 MROH6A6NGR9 719 aa12.45□□□□□ -0.42
SCN8A-202ENST00000355133 CRABP1P29762 137 aa12.45□□□□□ -0.42
SCN8A-202ENST00000355133 GCH1P30793 250 aa12.45□□□□□ -0.42
SCN8A-202ENST00000355133 BMXP51813 675 aa12.45□□□□□ -0.42
SCN8A-202ENST00000355133 HYAL4Q2M3T9 481 aa12.45□□□□□ -0.42
SCN8A-202ENST00000355133 OR5T1Q8NG75 326 aa12.45□□□□□ -0.42
SCN8A-202ENST00000355133 FKBP10Q96AY3 582 aa12.45□□□□□ -0.42
SCN8A-202ENST00000355133 CDC6Q99741 560 aa12.45□□□□□ -0.42
SCN8A-202ENST00000355133 RTP3Q9BQQ7 232 aa12.45□□□□□ -0.42
SCN8A-202ENST00000355133 PAPOLGQ9BWT3 736 aaKnown RBP12.45□□□□□ -0.42
SCN8A-202ENST00000355133 ACPTQ9BZG2 426 aa12.45□□□□□ -0.42
SCN8A-202ENST00000355133 MEPEQ9NQ76 525 aaPredicted RBP12.45□□□□□ -0.42
SCN8A-202ENST00000355133 AKAP12Q02952 1782 aa12.45□□□□□ -0.42
SCN8A-202ENST00000355133 KIR2DS5A0A0G2JLQ3 304 aa12.45□□□□□ -0.42
SCN8A-202ENST00000355133 A0A0G2JNG1 304 aa12.45□□□□□ -0.42
SCN8A-202ENST00000355133 TRBV11-1A0A0K0K1C0 115 aa12.45□□□□□ -0.42
SCN8A-202ENST00000355133 CDC14CA4D256 554 aa12.45□□□□□ -0.42
SCN8A-202ENST00000355133 KIR2DS3K7RE56 304 aa12.45□□□□□ -0.42
SCN8A-202ENST00000355133 MPPED1O15442 326 aa12.45□□□□□ -0.42
SCN8A-202ENST00000355133 ADAM12O43184 909 aa12.45□□□□□ -0.42
SCN8A-202ENST00000355133 ADAMTS4O75173 837 aa12.45□□□□□ -0.42
SCN8A-202ENST00000355133 PABPC4LP0CB38 370 aaKnown RBP12.45□□□□□ -0.42
SCN8A-202ENST00000355133 EPHA1P21709 976 aa12.45□□□□□ -0.42
SCN8A-202ENST00000355133 CD6P30203 668 aa12.45□□□□□ -0.42
SCN8A-202ENST00000355133 DAP3P51398 398 aaKnown RBP12.45□□□□□ -0.42
SCN8A-202ENST00000355133 ERVK-25P63136 954 aa12.45□□□□□ -0.42
SCN8A-202ENST00000355133 EEF1A1P68104 462 aaKnown RBP12.45□□□□□ -0.42
SCN8A-202ENST00000355133 KIR2DS5Q14953 304 aa12.45□□□□□ -0.42
SCN8A-202ENST00000355133 GOLM1Q8NBJ4 401 aa12.45□□□□□ -0.42
SCN8A-202ENST00000355133 ACOT13Q9NPJ3 140 aa12.45□□□□□ -0.42
SCN8A-202ENST00000355133 LRIT1Q9P2V4 623 aa12.45□□□□□ -0.42
SCN8A-202ENST00000355133 CACNA1FO60840 1977 aa12.45□□□□□ -0.42
SCN8A-202ENST00000355133 GABRR3A8MPY1 467 aa12.45□□□□□ -0.42
SCN8A-202ENST00000355133 NUDT21O43809 227 aaKnown RBP12.45□□□□□ -0.42
SCN8A-202ENST00000355133 KNG1P01042 644 aa12.45□□□□□ -0.42
SCN8A-202ENST00000355133 POU3F2P20265 443 aaPredicted RBP12.45□□□□□ -0.42
SCN8A-202ENST00000355133 PCGF2P35227 344 aa12.45□□□□□ -0.42
SCN8A-202ENST00000355133 NR4A2P43354 598 aa12.45□□□□□ -0.42
SCN8A-202ENST00000355133 ZNF616Q08AN1 781 aa12.45□□□□□ -0.42
SCN8A-202ENST00000355133 TMEM201Q5SNT2 666 aa12.45□□□□□ -0.42
SCN8A-202ENST00000355133 OR5M10Q6IEU7 315 aa12.45□□□□□ -0.42
SCN8A-202ENST00000355133 RNF175Q8N4F7 328 aa12.45□□□□□ -0.42
SCN8A-202ENST00000355133 MAFIPQ8WZ33 124 aa12.45□□□□□ -0.42
SCN8A-202ENST00000355133 TOMM40LQ969M1 308 aa12.45□□□□□ -0.42
SCN8A-202ENST00000355133 ADOQ96SZ5 270 aa12.45□□□□□ -0.42
SCN8A-202ENST00000355133 SDR39U1Q9NRG7 319 aaPredicted RBP12.45□□□□□ -0.42
SCN8A-202ENST00000355133 MPIG6BO95866 241 aa12.45□□□□□ -0.42
SCN8A-202ENST00000355133 MYF6P23409 242 aa12.45□□□□□ -0.42
SCN8A-202ENST00000355133 RBM12BQ8IXT5 1001 aaKnown RBP12.45□□□□□ -0.42
SCN8A-202ENST00000355133 ARFGAP1Q8N6T3 406 aa12.45□□□□□ -0.42
SCN8A-202ENST00000355133 FOXN4Q96NZ1 517 aa12.45□□□□□ -0.42
SCN8A-202ENST00000355133 RGCCQ9H4X1 137 aa12.45□□□□□ -0.42
SCN8A-202ENST00000355133 LRP6O75581 1613 aa12.45□□□□□ -0.42
SCN8A-202ENST00000355133 LOC102723532A0A0G2JNH3 316 aa12.45□□□□□ -0.42
SCN8A-202ENST00000355133 HMX3A6NHT5 357 aa12.45□□□□□ -0.42
SCN8A-202ENST00000355133 NOTOA8MTQ0 251 aa12.45□□□□□ -0.42
SCN8A-202ENST00000355133 MS4A2Q01362 244 aa12.45□□□□□ -0.42
SCN8A-202ENST00000355133 ZNF33BQ06732 778 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms