RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 SH2D5Q6ZV89 423 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 TUBA1AQ71U36 451 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 NBPF5PQ86XG9 351 aaPredicted RBP1.4□□□□□ -2.19
BRCA1-202ENST00000354071 OR4N5Q8IXE1 308 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 ZNF683Q8IZ20 524 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 OMA1Q96E52 524 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 PHF21BQ96EK2 531 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 SLC38A2Q96QD8 506 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 TUBA1CQ9BQE3 449 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 COG4Q9H9E3 785 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 CYP3A43Q9HB55 503 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 MEPEQ9NQ76 525 aaPredicted RBP1.4□□□□□ -2.19
BRCA1-202ENST00000354071 ZNF71Q9NQZ8 489 aaPredicted RBP1.4□□□□□ -2.19
BRCA1-202ENST00000354071 SPHK2Q9NRA0 654 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 IL36GQ9NZH8 169 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 RCOR3Q9P2K3 495 aaPredicted RBP1.4□□□□□ -2.19
BRCA1-202ENST00000354071 TEKT2Q9UIF3 430 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 POU2F3Q9UKI9 436 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 ZNF490Q9ULM2 529 aaPredicted RBP1.4□□□□□ -2.19
BRCA1-202ENST00000354071 PYGO1Q9Y3Y4 419 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 PLCH1Q4KWH8 1693 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 ZNF831Q5JPB2 1677 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 GON4LQ3T8J9 2241 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 PTPRGP23470 1445 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 TRAV26-1A0A087WT03 109 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 CASQ2O14958 399 aaPredicted RBP1.4□□□□□ -2.19
BRCA1-202ENST00000354071 KIAA0513O60268 411 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 CACNG3O60359 315 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 TOXO94900 526 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 DUS4LO95620 317 aaKnown RBP1.4□□□□□ -2.19
BRCA1-202ENST00000354071 CT62P0C5K7 136 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 ZNF853P0CG23 659 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 CD1DP15813 335 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 UCP1P25874 307 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 HTR2AP28223 471 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 NDST1P52848 882 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 NAPAP54920 295 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 RBBP4Q09028 425 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 ST3GAL3Q11203 375 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 ILF3Q12906 894 aaKnown RBP eCLIP1.4□□□□□ -2.19
BRCA1-202ENST00000354071 HNRNPA0Q13151 305 aaKnown RBP1.4□□□□□ -2.19
BRCA1-202ENST00000354071 ENPP2Q13822 863 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 PDK3Q15120 406 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 HADHQ16836 314 aaKnown RBP1.4□□□□□ -2.19
BRCA1-202ENST00000354071 DEFB115Q30KQ5 88 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 FGD3Q5JSP0 725 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 EFHC1Q5JVL4 640 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 FFAR4Q5NUL3 377 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 PRAMEF5Q5TYX0 476 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 PRAMEF6Q5VXH4 476 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 TCEAL6Q6IPX3 200 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 CCDC73Q6ZRK6 1079 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 Q6ZSR9 355 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 ZNF444Q8N0Y2 327 aaPredicted RBP1.4□□□□□ -2.19
BRCA1-202ENST00000354071 SPATA3Q8NHX4 192 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 GIPC3Q8TF64 312 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 ANKRD49Q8WVL7 239 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 TIMD4Q96H15 378 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 SF3B5Q9BWJ5 86 aaKnown RBP1.4□□□□□ -2.19
BRCA1-202ENST00000354071 RAB11FIP5Q9BXF6 653 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 ZDHHC18Q9NUE0 388 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 UFSP2Q9NUQ7 469 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 PDP1Q9P0J1 537 aaPredicted RBP1.4□□□□□ -2.19
BRCA1-202ENST00000354071 C19orf25Q9UFG5 118 aaPredicted RBP1.4□□□□□ -2.19
BRCA1-202ENST00000354071 CDH9Q9ULB4 789 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 GRID1Q9ULK0 1009 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 BOD1L1Q8NFC6 3051 aa1.4□□□□□ -2.19
BRCA1-202ENST00000354071 XIRP2A4UGR9 3374 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 A2ML1A8K2U0 1454 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 ZNF646O15015 1829 aaPredicted RBP1.39□□□□□ -2.19
BRCA1-202ENST00000354071 GIMAP1-GIMAP5A0A087WTJ2 511 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 TRBV5-4A0A0C4DH59 114 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 LRRIQ4A6NIV6 560 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 CD8B2A6NJW9 211 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 NEDD8-MDP1E9PL57 170 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 J3QKU1 62 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 BTN3A3O00478 584 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 FCN1O00602 326 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 PRKNO60260 465 aaPredicted RBP1.39□□□□□ -2.19
BRCA1-202ENST00000354071 SHOX2O60902 331 aaPredicted RBP1.39□□□□□ -2.19
BRCA1-202ENST00000354071 UPK3AO75631 287 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 CCDC159P0C7I6 412 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 ZNF44P15621 663 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 C4BPBP20851 252 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 DSCR9P59020 149 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 NOP14P78316 857 aaKnown RBP1.39□□□□□ -2.19
BRCA1-202ENST00000354071 XIAPP98170 497 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 ARL16Q0P5N6 197 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 LRRC23Q53EV4 343 aaPredicted RBP1.39□□□□□ -2.19
BRCA1-202ENST00000354071 DMRTC1Q5HYR2 192 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 NIPA1Q7RTP0 329 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 SLC22A15Q8IZD6 547 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 STXBP6Q8NFX7 210 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 OR9K2Q8NGE7 335 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 TBCKQ8TEA7 893 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 ART4Q93070 314 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 DNAJA3Q96EY1 480 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 AKR1E2Q96JD6 320 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 CFAP53Q96M91 514 aa1.39□□□□□ -2.19
BRCA1-202ENST00000354071 ZNF385AQ96PM9 386 aaKnown RBP1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms