RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 ACTR1AP61163 376 aa12.43□□□□□ -0.42
IFT88-202ENST00000351808 DYRK1AQ13627 763 aa12.43□□□□□ -0.42
IFT88-202ENST00000351808 CFAP206Q8IYR0 622 aa12.43□□□□□ -0.42
IFT88-202ENST00000351808 CPXM2Q8N436 756 aa12.43□□□□□ -0.42
IFT88-202ENST00000351808 WDSUB1Q8N9V3 476 aa12.43□□□□□ -0.42
IFT88-202ENST00000351808 OR6K3Q8NGY3 331 aa12.43□□□□□ -0.42
IFT88-202ENST00000351808 FGF11Q92914 225 aa12.43□□□□□ -0.42
IFT88-202ENST00000351808 KCTD12Q96CX2 325 aaKnown RBP12.43□□□□□ -0.42
IFT88-202ENST00000351808 ORAI3Q9BRQ5 295 aa12.43□□□□□ -0.42
IFT88-202ENST00000351808 ADGRE3Q9BY15 652 aa12.43□□□□□ -0.42
IFT88-202ENST00000351808 MVB12BQ9H7P6 319 aa12.43□□□□□ -0.42
IFT88-202ENST00000351808 NOX3Q9HBY0 568 aa12.43□□□□□ -0.42
IFT88-202ENST00000351808 HRASLSQ9HDD0 168 aa12.43□□□□□ -0.42
IFT88-202ENST00000351808 MRPS18AQ9NVS2 196 aaKnown RBP12.43□□□□□ -0.42
IFT88-202ENST00000351808 ZNF646O15015 1829 aaPredicted RBP12.42□□□□□ -0.42
IFT88-202ENST00000351808 KCNE1BA0A087WTH5 132 aa12.42□□□□□ -0.42
IFT88-202ENST00000351808 UBE2CO00762 179 aa12.42□□□□□ -0.42
IFT88-202ENST00000351808 SCAMP2O15127 329 aaKnown RBP12.42□□□□□ -0.42
IFT88-202ENST00000351808 PRMT3O60678 531 aa12.42□□□□□ -0.42
IFT88-202ENST00000351808 RGS9O75916 674 aaPredicted RBP12.42□□□□□ -0.42
IFT88-202ENST00000351808 CPN1P15169 458 aa12.42□□□□□ -0.42
IFT88-202ENST00000351808 EDNRBP24530 442 aa12.42□□□□□ -0.42
IFT88-202ENST00000351808 NOS3P29474 1203 aa12.42□□□□□ -0.42
IFT88-202ENST00000351808 SLC11A2P49281 568 aa12.42□□□□□ -0.42
IFT88-202ENST00000351808 H2BFSP57053 126 aa12.42□□□□□ -0.42
IFT88-202ENST00000351808 HBA1P69905 142 aa12.42□□□□□ -0.42
IFT88-202ENST00000351808 C21orf62-AS1Q17RA5 79 aa12.42□□□□□ -0.42
IFT88-202ENST00000351808 EIF2S3LQ2VIR3 472 aaKnown RBP12.42□□□□□ -0.42
IFT88-202ENST00000351808 SLC25A30Q5SVS4 291 aa12.42□□□□□ -0.42
IFT88-202ENST00000351808 OR7E24Q6IFN5 339 aa12.42□□□□□ -0.42
IFT88-202ENST00000351808 FUT10Q6P4F1 479 aa12.42□□□□□ -0.42
IFT88-202ENST00000351808 MOB3CQ70IA8 216 aa12.42□□□□□ -0.42
IFT88-202ENST00000351808 LINC01465Q8N7H1 131 aa12.42□□□□□ -0.42
IFT88-202ENST00000351808 PNPLA2Q96AD5 504 aa12.42□□□□□ -0.42
IFT88-202ENST00000351808 RGMAQ96B86 450 aa12.42□□□□□ -0.42
IFT88-202ENST00000351808 SMARCD1Q96GM5 515 aa12.42□□□□□ -0.42
IFT88-202ENST00000351808 SLC35A5Q9BS91 424 aa12.42□□□□□ -0.42
IFT88-202ENST00000351808 BOCQ9BWV1 1114 aa12.42□□□□□ -0.42
IFT88-202ENST00000351808 PRM3Q9NNZ6 103 aa12.42□□□□□ -0.42
IFT88-202ENST00000351808 KLHL1Q9NR64 748 aa12.42□□□□□ -0.42
IFT88-202ENST00000351808 C1GALT1Q9NS00 363 aa12.42□□□□□ -0.42
IFT88-202ENST00000351808 ATXN7L1Q9ULK2 861 aaPredicted RBP12.42□□□□□ -0.42
IFT88-202ENST00000351808 A0A1B0GTQ1 180 aa12.42□□□□□ -0.42
IFT88-202ENST00000351808 PRAMEF4O60810 478 aa12.42□□□□□ -0.42
IFT88-202ENST00000351808 SLC25A14O95258 325 aaPredicted RBP12.42□□□□□ -0.42
IFT88-202ENST00000351808 EPHX1P07099 455 aa12.42□□□□□ -0.42
IFT88-202ENST00000351808 UCHL1P09936 223 aa12.42□□□□□ -0.42
IFT88-202ENST00000351808 MAPK9P45984 424 aa12.42□□□□□ -0.42
IFT88-202ENST00000351808 CCR8P51685 355 aa12.42□□□□□ -0.42
IFT88-202ENST00000351808 BLOC1S1P78537 153 aa12.42□□□□□ -0.42
IFT88-202ENST00000351808 DEFA6Q01524 100 aa12.42□□□□□ -0.42
IFT88-202ENST00000351808 TLE2Q04725 743 aa12.42□□□□□ -0.42
IFT88-202ENST00000351808 ALKBH1Q13686 389 aaKnown RBP12.42□□□□□ -0.42
IFT88-202ENST00000351808 PRAMEF9Q5VWM5 478 aa12.42□□□□□ -0.42
IFT88-202ENST00000351808 TCTN3Q6NUS6 607 aa12.42□□□□□ -0.42
IFT88-202ENST00000351808 H3F3CQ6NXT2 135 aa12.42□□□□□ -0.42
IFT88-202ENST00000351808 PGAP1Q75T13 922 aa12.42□□□□□ -0.42
IFT88-202ENST00000351808 SLC7A13Q8TCU3 470 aa12.42□□□□□ -0.42
IFT88-202ENST00000351808 ORAI1Q96D31 301 aa12.42□□□□□ -0.42
IFT88-202ENST00000351808 SCLYQ96I15 445 aa12.42□□□□□ -0.42
IFT88-202ENST00000351808 MTERF1Q99551 399 aaKnown RBP12.42□□□□□ -0.42
IFT88-202ENST00000351808 ZYG11BQ9C0D3 744 aa12.42□□□□□ -0.42
IFT88-202ENST00000351808 SLC32A1Q9H598 525 aa12.42□□□□□ -0.42
IFT88-202ENST00000351808 ZNF282Q9UDV7 671 aaPredicted RBP12.42□□□□□ -0.42
IFT88-202ENST00000351808 SIRT4Q9Y6E7 314 aaPredicted RBP12.42□□□□□ -0.42
IFT88-202ENST00000351808 PHIPQ8WWQ0 1821 aa12.41□□□□□ -0.42
IFT88-202ENST00000351808 ANHXE9PGG2 379 aa12.41□□□□□ -0.42
IFT88-202ENST00000351808 PGRMC2O15173 223 aa12.41□□□□□ -0.42
IFT88-202ENST00000351808 RNF13O43567 381 aa12.41□□□□□ -0.42
IFT88-202ENST00000351808 NME6O75414 186 aaPredicted RBP12.41□□□□□ -0.42
IFT88-202ENST00000351808 H1F0P07305 194 aaKnown RBP12.41□□□□□ -0.42
IFT88-202ENST00000351808 ZNF35P13682 527 aa12.41□□□□□ -0.42
IFT88-202ENST00000351808 SNRPBP14678 240 aaKnown RBP12.41□□□□□ -0.42
IFT88-202ENST00000351808 CSF2RBP32927 897 aa12.41□□□□□ -0.42
IFT88-202ENST00000351808 RPL3P39023 403 aaKnown RBP12.41□□□□□ -0.42
IFT88-202ENST00000351808 SLC6A11P48066 632 aa12.41□□□□□ -0.42
IFT88-202ENST00000351808 EFNB1P98172 346 aa12.41□□□□□ -0.42
IFT88-202ENST00000351808 PITPNAQ00169 270 aa12.41□□□□□ -0.42
IFT88-202ENST00000351808 FABP9Q0Z7S8 132 aa12.41□□□□□ -0.42
IFT88-202ENST00000351808 ZXDCQ2QGD7 858 aaPredicted RBP12.41□□□□□ -0.42
IFT88-202ENST00000351808 KLHL26Q53HC5 615 aa12.41□□□□□ -0.42
IFT88-202ENST00000351808 ARMC12Q5T9G4 340 aa12.41□□□□□ -0.42
IFT88-202ENST00000351808 FRG2Q64ET8 278 aa12.41□□□□□ -0.42
IFT88-202ENST00000351808 FAAP20Q6NZ36 180 aa12.41□□□□□ -0.42
IFT88-202ENST00000351808 OR6V1Q8N148 313 aa12.41□□□□□ -0.42
IFT88-202ENST00000351808 KLHL36Q8N4N3 616 aa12.41□□□□□ -0.42
IFT88-202ENST00000351808 HORMAD2Q8N7B1 307 aa12.41□□□□□ -0.42
IFT88-202ENST00000351808 FRG2BQ96QU4 278 aa12.41□□□□□ -0.42
IFT88-202ENST00000351808 TM6SF2Q9BZW4 377 aa12.41□□□□□ -0.42
IFT88-202ENST00000351808 TLNRD1Q9H1K6 362 aa12.41□□□□□ -0.42
IFT88-202ENST00000351808 ISG20L2Q9H9L3 353 aaKnown RBP12.41□□□□□ -0.42
IFT88-202ENST00000351808 KCNK12Q9HB15 430 aa12.41□□□□□ -0.42
IFT88-202ENST00000351808 ZSWIM8A7E2V4 1837 aa12.41□□□□□ -0.42
IFT88-202ENST00000351808 FAAHO00519 579 aa12.41□□□□□ -0.42
IFT88-202ENST00000351808 RHOQP17081 205 aa12.41□□□□□ -0.42
IFT88-202ENST00000351808 IDSP22304 550 aa12.41□□□□□ -0.42
IFT88-202ENST00000351808 RGRP47804 291 aa12.41□□□□□ -0.42
IFT88-202ENST00000351808 GCGRP47871 477 aa12.41□□□□□ -0.42
IFT88-202ENST00000351808 PSMD4P55036 377 aaKnown RBP12.41□□□□□ -0.42
IFT88-202ENST00000351808 UBE2MP61081 183 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms