RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 MFFQ9GZY8 342 aa10□□□□□ -0.81
CAPN3-203ENST00000349748 TMPRSS5Q9H3S3 457 aa10□□□□□ -0.81
CAPN3-203ENST00000349748 RIMS4Q9H426 269 aaPredicted RBP10□□□□□ -0.81
CAPN3-203ENST00000349748 XKR8Q9H6D3 395 aa10□□□□□ -0.81
CAPN3-203ENST00000349748 AUNIPQ9H7T9 357 aa10□□□□□ -0.81
CAPN3-203ENST00000349748 ACER3Q9NUN7 267 aa10□□□□□ -0.81
CAPN3-203ENST00000349748 DNAJC25-GNG10A0A024R161 153 aa9.99□□□□□ -0.81
CAPN3-203ENST00000349748 PPIHO43447 177 aaKnown RBP9.99□□□□□ -0.81
CAPN3-203ENST00000349748 KLK8O60259 260 aa9.99□□□□□ -0.81
CAPN3-203ENST00000349748 SLC25A12O75746 678 aa9.99□□□□□ -0.81
CAPN3-203ENST00000349748 LATS1O95835 1130 aa9.99□□□□□ -0.81
CAPN3-203ENST00000349748 HCKP08631 526 aa9.99□□□□□ -0.81
CAPN3-203ENST00000349748 OR12D1P0DN82 309 aa9.99□□□□□ -0.81
CAPN3-203ENST00000349748 ADH6P28332 368 aa9.99□□□□□ -0.81
CAPN3-203ENST00000349748 ADCYAP1R1P41586 468 aa9.99□□□□□ -0.81
CAPN3-203ENST00000349748 STARD6P59095 220 aa9.99□□□□□ -0.81
CAPN3-203ENST00000349748 SNRPGP62308 76 aaKnown RBP9.99□□□□□ -0.81
CAPN3-203ENST00000349748 ITKQ08881 620 aa9.99□□□□□ -0.81
CAPN3-203ENST00000349748 GTF2H2Q13888 395 aa9.99□□□□□ -0.81
CAPN3-203ENST00000349748 GTF2H2CQ6P1K8 395 aa9.99□□□□□ -0.81
CAPN3-203ENST00000349748 ZC3H14Q6PJT7 736 aaKnown RBP9.99□□□□□ -0.81
CAPN3-203ENST00000349748 CD200R1LQ6Q8B3 271 aa9.99□□□□□ -0.81
CAPN3-203ENST00000349748 OR13C4Q8NGS5 318 aa9.99□□□□□ -0.81
CAPN3-203ENST00000349748 OR4Q3Q8NH05 313 aa9.99□□□□□ -0.81
CAPN3-203ENST00000349748 HUS1BQ8NHY5 278 aa9.99□□□□□ -0.81
CAPN3-203ENST00000349748 RNFT2Q96EX2 444 aa9.99□□□□□ -0.81
CAPN3-203ENST00000349748 ZNF75AQ96N20 296 aa9.99□□□□□ -0.81
CAPN3-203ENST00000349748 FDXACB1Q9BRP7 624 aaPredicted RBP9.99□□□□□ -0.81
CAPN3-203ENST00000349748 WDR13Q9H1Z4 485 aa9.99□□□□□ -0.81
CAPN3-203ENST00000349748 PRO1933Q9H354 126 aa9.99□□□□□ -0.81
CAPN3-203ENST00000349748 TNFSF13BQ9Y275 285 aa9.99□□□□□ -0.81
CAPN3-203ENST00000349748 FNDC3AQ9Y2H6 1198 aaKnown RBP9.99□□□□□ -0.81
CAPN3-203ENST00000349748 C5orf58C9J3I9 102 aa9.99□□□□□ -0.81
CAPN3-203ENST00000349748 TGM5O43548 720 aa9.99□□□□□ -0.81
CAPN3-203ENST00000349748 SLC28A2O43868 658 aa9.99□□□□□ -0.81
CAPN3-203ENST00000349748 PRKYO43930 277 aa9.99□□□□□ -0.81
CAPN3-203ENST00000349748 AQP8O94778 261 aa9.99□□□□□ -0.81
CAPN3-203ENST00000349748 ANXA2P07355 339 aaKnown RBP9.99□□□□□ -0.81
CAPN3-203ENST00000349748 HOXB8P17481 243 aaPredicted RBP9.99□□□□□ -0.81
CAPN3-203ENST00000349748 PSMA3P25788 255 aa9.99□□□□□ -0.81
CAPN3-203ENST00000349748 LMO2P25791 158 aa9.99□□□□□ -0.81
CAPN3-203ENST00000349748 SHC1P29353 583 aa9.99□□□□□ -0.81
CAPN3-203ENST00000349748 ANXA11P50995 505 aaKnown RBP9.99□□□□□ -0.81
CAPN3-203ENST00000349748 IHHQ14623 411 aa9.99□□□□□ -0.81
CAPN3-203ENST00000349748 SSPNQ14714 243 aa9.99□□□□□ -0.81
CAPN3-203ENST00000349748 HEPACAMQ14CZ8 416 aa9.99□□□□□ -0.81
CAPN3-203ENST00000349748 LCORQ96JN0 433 aaPredicted RBP9.99□□□□□ -0.81
CAPN3-203ENST00000349748 GPR20Q99678 358 aa9.99□□□□□ -0.81
CAPN3-203ENST00000349748 PINK1Q9BXM7 581 aa9.99□□□□□ -0.81
CAPN3-203ENST00000349748 TEX12Q9BXU0 123 aa9.99□□□□□ -0.81
CAPN3-203ENST00000349748 TOLLIPQ9H0E2 274 aa9.99□□□□□ -0.81
CAPN3-203ENST00000349748 SLC38A1Q9H2H9 487 aa9.99□□□□□ -0.81
CAPN3-203ENST00000349748 CHRDQ9H2X0 955 aa9.99□□□□□ -0.81
CAPN3-203ENST00000349748 PIGMQ9H3S5 423 aa9.99□□□□□ -0.81
CAPN3-203ENST00000349748 PRDM13Q9H4Q3 707 aa9.99□□□□□ -0.81
CAPN3-203ENST00000349748 OPA3Q9H6K4 179 aa9.99□□□□□ -0.81
CAPN3-203ENST00000349748 GKN1Q9NS71 199 aa9.99□□□□□ -0.81
CAPN3-203ENST00000349748 OPN4Q9UHM6 478 aa9.99□□□□□ -0.81
CAPN3-203ENST00000349748 MED6O75586 246 aa9.99□□□□□ -0.81
CAPN3-203ENST00000349748 OR2A4O95047 310 aa9.99□□□□□ -0.81
CAPN3-203ENST00000349748 ACTL6AO96019 429 aa9.99□□□□□ -0.81
CAPN3-203ENST00000349748 RB1P06400 928 aa9.99□□□□□ -0.81
CAPN3-203ENST00000349748 SRPRAP08240 638 aaKnown RBP9.99□□□□□ -0.81
CAPN3-203ENST00000349748 NME1P15531 152 aaKnown RBP9.99□□□□□ -0.81
CAPN3-203ENST00000349748 IDSP22304 550 aa9.99□□□□□ -0.81
CAPN3-203ENST00000349748 CTGFP29279 349 aa9.99□□□□□ -0.81
CAPN3-203ENST00000349748 CD86P42081 329 aa9.99□□□□□ -0.81
CAPN3-203ENST00000349748 PPA1Q15181 289 aa9.99□□□□□ -0.81
CAPN3-203ENST00000349748 CXorf57Q6NSI4 855 aaKnown RBP9.99□□□□□ -0.81
CAPN3-203ENST00000349748 SLC30A6Q6NXT4 461 aa9.99□□□□□ -0.81
CAPN3-203ENST00000349748 FAAP20Q6NZ36 180 aa9.99□□□□□ -0.81
CAPN3-203ENST00000349748 POMZP3Q6PJE2 187 aa9.99□□□□□ -0.81
CAPN3-203ENST00000349748 METTL7BQ6UX53 244 aa9.99□□□□□ -0.81
CAPN3-203ENST00000349748 OR6K3Q8NGY3 331 aa9.99□□□□□ -0.81
CAPN3-203ENST00000349748 NT5C3BQ969T7 300 aa9.99□□□□□ -0.81
CAPN3-203ENST00000349748 ORAI1Q96D31 301 aa9.99□□□□□ -0.81
CAPN3-203ENST00000349748 LINGO1Q96FE5 620 aa9.99□□□□□ -0.81
CAPN3-203ENST00000349748 TEFMQ96QE5 360 aaKnown RBP9.99□□□□□ -0.81
CAPN3-203ENST00000349748 OR2A7Q96R45 310 aa9.99□□□□□ -0.81
CAPN3-203ENST00000349748 CLCC1Q96S66 551 aa9.99□□□□□ -0.81
CAPN3-203ENST00000349748 ARHGAP9Q9BRR9 750 aa9.99□□□□□ -0.81
CAPN3-203ENST00000349748 ATG101Q9BSB4 218 aa9.99□□□□□ -0.81
CAPN3-203ENST00000349748 ISYNA1Q9NPH2 558 aa9.99□□□□□ -0.81
CAPN3-203ENST00000349748 CTPS2Q9NRF8 586 aa9.99□□□□□ -0.81
CAPN3-203ENST00000349748 TDP1Q9NUW8 608 aa9.99□□□□□ -0.81
CAPN3-203ENST00000349748 DDIT4Q9NX09 232 aa9.99□□□□□ -0.81
CAPN3-203ENST00000349748 TAS2R13Q9NYV9 303 aa9.99□□□□□ -0.81
CAPN3-203ENST00000349748 PPP4R1LQ9P1A2 415 aa9.99□□□□□ -0.81
CAPN3-203ENST00000349748 DNAH12Q6ZR08 3092 aa9.98□□□□□ -0.81
CAPN3-203ENST00000349748 HMSDA8MTL9 139 aa9.98□□□□□ -0.81
CAPN3-203ENST00000349748 FARS2O95363 451 aaKnown RBP9.98□□□□□ -0.81
CAPN3-203ENST00000349748 GUCA1CO95843 209 aa9.98□□□□□ -0.81
CAPN3-203ENST00000349748 IGHV2-5P01817 119 aa9.98□□□□□ -0.81
CAPN3-203ENST00000349748 HMBSP08397 361 aa9.98□□□□□ -0.81
CAPN3-203ENST00000349748 ETFAP13804 333 aa9.98□□□□□ -0.81
CAPN3-203ENST00000349748 FOLR2P14207 255 aa9.98□□□□□ -0.81
CAPN3-203ENST00000349748 GPX2P18283 190 aa9.98□□□□□ -0.81
CAPN3-203ENST00000349748 TM4SF4P48230 202 aa9.98□□□□□ -0.81
CAPN3-203ENST00000349748 LUMP51884 338 aaPredicted RBP9.98□□□□□ -0.81
CAPN3-203ENST00000349748 USF2Q15853 346 aaPredicted RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms