RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 EFR3AQ14156 821 aa16.89■□□□□ 0.29
PTP4A3-202ENST00000349124 PGGHGQ32M88 737 aa16.89■□□□□ 0.29
PTP4A3-202ENST00000349124 TMEFF1Q8IYR6 380 aa16.89■□□□□ 0.29
PTP4A3-202ENST00000349124 HDDC3Q8N4P3 179 aa16.89■□□□□ 0.29
PTP4A3-202ENST00000349124 OR4E2Q8NGC2 313 aa16.89■□□□□ 0.29
PTP4A3-202ENST00000349124 ACOT11Q8WXI4 607 aaPredicted RBP16.89■□□□□ 0.29
PTP4A3-202ENST00000349124 SMAD5Q99717 465 aaKnown RBP16.89■□□□□ 0.29
PTP4A3-202ENST00000349124 KNL1Q8NG31 2342 aa16.88■□□□□ 0.29
PTP4A3-202ENST00000349124 NPIPA5A0A0B4J1W7 369 aa16.88■□□□□ 0.29
PTP4A3-202ENST00000349124 A0A0G2JMP0 313 aa16.88■□□□□ 0.29
PTP4A3-202ENST00000349124 A0A0X1KG70 313 aa16.88■□□□□ 0.29
PTP4A3-202ENST00000349124 FAM240BA0A1B0GVZ2 78 aa16.88■□□□□ 0.29
PTP4A3-202ENST00000349124 NPIPA7E9PJI5 369 aa16.88■□□□□ 0.29
PTP4A3-202ENST00000349124 EFCAB14O75071 495 aa16.88■□□□□ 0.29
PTP4A3-202ENST00000349124 FAM157BP0CG42 384 aa16.88■□□□□ 0.29
PTP4A3-202ENST00000349124 NPIPA8P0DM63 369 aa16.88■□□□□ 0.29
PTP4A3-202ENST00000349124 CHRNB1P11230 501 aa16.88■□□□□ 0.29
PTP4A3-202ENST00000349124 ELK1P19419 428 aa16.88■□□□□ 0.29
PTP4A3-202ENST00000349124 SDHBP21912 280 aa16.88■□□□□ 0.29
PTP4A3-202ENST00000349124 AGFG1P52594 562 aaKnown RBP16.88■□□□□ 0.29
PTP4A3-202ENST00000349124 C2orf27AQ580R0 203 aa16.88■□□□□ 0.29
PTP4A3-202ENST00000349124 FCRLBQ6BAA4 426 aa16.88■□□□□ 0.29
PTP4A3-202ENST00000349124 ZNF322Q6U7Q0 402 aaPredicted RBP16.88■□□□□ 0.29
PTP4A3-202ENST00000349124 ZNF620Q6ZNG0 422 aa16.88■□□□□ 0.29
PTP4A3-202ENST00000349124 BMPERQ8N8U9 685 aa16.88■□□□□ 0.29
PTP4A3-202ENST00000349124 OR4M2Q8NGB6 313 aa16.88■□□□□ 0.29
PTP4A3-202ENST00000349124 ADAMTS15Q8TE58 950 aa16.88■□□□□ 0.29
PTP4A3-202ENST00000349124 CHFRQ96EP1 664 aa16.88■□□□□ 0.29
PTP4A3-202ENST00000349124 TIMP4Q99727 224 aa16.88■□□□□ 0.29
PTP4A3-202ENST00000349124 DPH1Q9BZG8 443 aa16.88■□□□□ 0.29
PTP4A3-202ENST00000349124 PITHD1Q9GZP4 211 aaPredicted RBP16.88■□□□□ 0.29
PTP4A3-202ENST00000349124 ISYNA1Q9NPH2 558 aa16.88■□□□□ 0.29
PTP4A3-202ENST00000349124 ATP13A2Q9NQ11 1180 aa16.88■□□□□ 0.29
PTP4A3-202ENST00000349124 PTPRSQ13332 1948 aa16.88■□□□□ 0.29
PTP4A3-202ENST00000349124 ISM1B1AKI9 464 aa16.88■□□□□ 0.29
PTP4A3-202ENST00000349124 FAM25AB3EWG3 89 aa16.88■□□□□ 0.29
PTP4A3-202ENST00000349124 FAM25CB3EWG5 89 aa16.88■□□□□ 0.29
PTP4A3-202ENST00000349124 FAM25GB3EWG6 89 aa16.88■□□□□ 0.29
PTP4A3-202ENST00000349124 LYRM1O43325 122 aa16.88■□□□□ 0.29
PTP4A3-202ENST00000349124 PRICKLE3O43900 615 aaPredicted RBP16.88■□□□□ 0.29
PTP4A3-202ENST00000349124 REM1O75628 298 aa16.88■□□□□ 0.29
PTP4A3-202ENST00000349124 NFATC1O95644 943 aa16.88■□□□□ 0.29
PTP4A3-202ENST00000349124 EML2O95834 649 aa16.88■□□□□ 0.29
PTP4A3-202ENST00000349124 HLA-DPB1P04440 258 aa16.88■□□□□ 0.29
PTP4A3-202ENST00000349124 CEACAM5P06731 702 aa16.88■□□□□ 0.29
PTP4A3-202ENST00000349124 YES1P07947 543 aa16.88■□□□□ 0.29
PTP4A3-202ENST00000349124 HNRNPA1P09651 372 aaKnown RBP eCLIP16.88■□□□□ 0.29
PTP4A3-202ENST00000349124 GALK2Q01415 458 aa16.88■□□□□ 0.29
PTP4A3-202ENST00000349124 DSG2Q14126 1118 aa16.88■□□□□ 0.29
PTP4A3-202ENST00000349124 GNA13Q14344 377 aa16.88■□□□□ 0.29
PTP4A3-202ENST00000349124 YIF1BQ5BJH7 314 aa16.88■□□□□ 0.29
PTP4A3-202ENST00000349124 IDNKQ5T6J7 187 aa16.88■□□□□ 0.29
PTP4A3-202ENST00000349124 LYPD8Q6UX82 237 aa16.88■□□□□ 0.29
PTP4A3-202ENST00000349124 WDR88Q6ZMY6 472 aa16.88■□□□□ 0.29
PTP4A3-202ENST00000349124 FRRS1Q6ZNA5 592 aa16.88■□□□□ 0.29
PTP4A3-202ENST00000349124 KLHL36Q8N4N3 616 aa16.88■□□□□ 0.29
PTP4A3-202ENST00000349124 TMEM99Q8N816 258 aa16.88■□□□□ 0.29
PTP4A3-202ENST00000349124 OR2L8Q8NGY9 312 aa16.88■□□□□ 0.29
PTP4A3-202ENST00000349124 SFXN5Q8TD22 340 aa16.88■□□□□ 0.29
PTP4A3-202ENST00000349124 OSTF1Q92882 214 aa16.88■□□□□ 0.29
PTP4A3-202ENST00000349124 SLC6A17Q9H1V8 727 aa16.88■□□□□ 0.29
PTP4A3-202ENST00000349124 UBQLN3Q9H347 655 aa16.88■□□□□ 0.29
PTP4A3-202ENST00000349124 C20orf141Q9NUB4 165 aa16.88■□□□□ 0.29
PTP4A3-202ENST00000349124 RBFOX1Q9NWB1 397 aaKnown RBP16.88■□□□□ 0.29
PTP4A3-202ENST00000349124 FBXO34Q9NWN3 711 aa16.88■□□□□ 0.29
PTP4A3-202ENST00000349124 TNFRSF10DQ9UBN6 386 aa16.88■□□□□ 0.29
PTP4A3-202ENST00000349124 MAU2Q9Y6X3 613 aa16.88■□□□□ 0.29
PTP4A3-202ENST00000349124 SPTBN5Q9NRC6 3674 aaKnown RBP16.88■□□□□ 0.29
PTP4A3-202ENST00000349124 MDC1Q14676 2089 aaKnown RBP16.87■□□□□ 0.29
PTP4A3-202ENST00000349124 E9PI62 339 aa16.87■□□□□ 0.29
PTP4A3-202ENST00000349124 SYT5O00445 386 aa16.87■□□□□ 0.29
PTP4A3-202ENST00000349124 KLF4O43474 513 aa16.87■□□□□ 0.29
PTP4A3-202ENST00000349124 FPR3P25089 353 aa16.87■□□□□ 0.29
PTP4A3-202ENST00000349124 GCGRP47871 477 aa16.87■□□□□ 0.29
PTP4A3-202ENST00000349124 FXYD6P3P58550 94 aa16.87■□□□□ 0.29
PTP4A3-202ENST00000349124 SIM1P81133 766 aaPredicted RBP16.87■□□□□ 0.29
PTP4A3-202ENST00000349124 GPR68Q15743 365 aa16.87■□□□□ 0.29
PTP4A3-202ENST00000349124 MAPK14Q16539 360 aa16.87■□□□□ 0.29
PTP4A3-202ENST00000349124 PUS10Q3MIT2 529 aaKnown RBP16.87■□□□□ 0.29
PTP4A3-202ENST00000349124 ASB18Q6ZVZ8 466 aa16.87■□□□□ 0.29
PTP4A3-202ENST00000349124 CADM2Q8N3J6 435 aa16.87■□□□□ 0.29
PTP4A3-202ENST00000349124 RAB42Q8N4Z0 105 aa16.87■□□□□ 0.29
PTP4A3-202ENST00000349124 BTBD1Q9H0C5 482 aa16.87■□□□□ 0.29
PTP4A3-202ENST00000349124 GALNT9Q9HCQ5 603 aa16.87■□□□□ 0.29
PTP4A3-202ENST00000349124 PTGFRNQ9P2B2 879 aa16.87■□□□□ 0.29
PTP4A3-202ENST00000349124 C12orf71A8MTZ7 269 aa16.87■□□□□ 0.29
PTP4A3-202ENST00000349124 PAHP00439 452 aa16.87■□□□□ 0.29
PTP4A3-202ENST00000349124 SHC1P29353 583 aa16.87■□□□□ 0.29
PTP4A3-202ENST00000349124 ANXA11P50995 505 aaKnown RBP16.87■□□□□ 0.29
PTP4A3-202ENST00000349124 ADGRD2Q7Z7M1 963 aa16.87■□□□□ 0.29
PTP4A3-202ENST00000349124 PFN4Q8NHR9 129 aa16.87■□□□□ 0.29
PTP4A3-202ENST00000349124 DNAJA4Q8WW22 397 aaPredicted RBP16.87■□□□□ 0.29
PTP4A3-202ENST00000349124 ASB16Q96NS5 453 aa16.87■□□□□ 0.29
PTP4A3-202ENST00000349124 TMEM43Q9BTV4 400 aa16.87■□□□□ 0.29
PTP4A3-202ENST00000349124 CRISPLD2Q9H0B8 497 aa16.87■□□□□ 0.29
PTP4A3-202ENST00000349124 H2AFY2Q9P0M6 372 aaPredicted RBP16.87■□□□□ 0.29
PTP4A3-202ENST00000349124 ZNF780BQ9Y6R6 833 aa16.87■□□□□ 0.29
PTP4A3-202ENST00000349124 EYSQ5T1H1 3165 aa16.87■□□□□ 0.29
PTP4A3-202ENST00000349124 PLOD3O60568 738 aa16.86■□□□□ 0.29
PTP4A3-202ENST00000349124 TRAPPC2P0DI81 140 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms