RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 S100A11P31949 105 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 KCNJ5P48544 419 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 RNF144AP50876 292 aaPredicted RBP9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 AKR1D1P51857 326 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 MAZP56270 477 aaKnown RBP9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 SEMG2Q02383 582 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 DDX39BQ13838 428 aaKnown RBP9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 COL19A1Q14993 1142 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 TSC22D1Q15714 1073 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 FAM69AQ5T7M9 428 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 SFXN4Q6P4A7 337 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 SMARCD3Q6STE5 483 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 PRSS55Q6UWB4 352 aaPredicted RBP9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 ALKAL2Q6UX46 152 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 BAIAP2L2Q6UXY1 529 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 RNF180Q86T96 592 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 NPAS4Q8IUM7 802 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 FAM98AQ8NCA5 519 aaKnown RBP9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 OR6K2Q8NGY2 324 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 SPRYD4Q8WW59 207 aaPredicted RBP9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 NSMAFQ92636 917 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 PPCDCQ96CD2 204 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 ZNF354BQ96LW1 612 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 OR2A7Q96R45 310 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 EFCAB11Q9BUY7 163 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 WDR26Q9H7D7 661 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 MVB12BQ9H7P6 319 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 A4GALTQ9NPC4 353 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 NANSQ9NR45 359 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 PTGFRNQ9P2B2 879 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 STOX2Q9P2F5 926 aaPredicted RBP9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 RASD1Q9Y272 281 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 SLC6A5Q9Y345 797 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 HELZP42694 1942 aaKnown RBP9.67□□□□□ -0.86
CHRNA1-202ENST00000348749 POM121CA8CG34 1229 aa9.67□□□□□ -0.86
CHRNA1-202ENST00000348749 HMSDA8MTL9 139 aa9.67□□□□□ -0.86
CHRNA1-202ENST00000348749 ARHGEF33A8MVX0 844 aa9.67□□□□□ -0.86
CHRNA1-202ENST00000348749 LRRN3E7EW58 273 aa9.67□□□□□ -0.86
CHRNA1-202ENST00000348749 KPNA3O00505 521 aaPredicted RBP9.67□□□□□ -0.86
CHRNA1-202ENST00000348749 YKT6O15498 198 aa9.67□□□□□ -0.86
CHRNA1-202ENST00000348749 HYAL3O43820 417 aaPredicted RBP9.67□□□□□ -0.86
CHRNA1-202ENST00000348749 TBX19O60806 448 aa9.67□□□□□ -0.86
CHRNA1-202ENST00000348749 OR5F1O95221 314 aa9.67□□□□□ -0.86
CHRNA1-202ENST00000348749 POP4O95707 220 aaKnown RBP9.67□□□□□ -0.86
CHRNA1-202ENST00000348749 HPP00738 406 aa9.67□□□□□ -0.86
CHRNA1-202ENST00000348749 UQCRC2P22695 453 aa9.67□□□□□ -0.86
CHRNA1-202ENST00000348749 OR1D2P34982 312 aa9.67□□□□□ -0.86
CHRNA1-202ENST00000348749 SLC6A11P48066 632 aa9.67□□□□□ -0.86
CHRNA1-202ENST00000348749 DGCR2P98153 550 aa9.67□□□□□ -0.86
CHRNA1-202ENST00000348749 SNTB2Q13425 540 aaKnown RBP9.67□□□□□ -0.86
CHRNA1-202ENST00000348749 NAE1Q13564 534 aa9.67□□□□□ -0.86
CHRNA1-202ENST00000348749 GK2Q14410 553 aaPredicted RBP9.67□□□□□ -0.86
CHRNA1-202ENST00000348749 ZSWIM7Q19AV6 140 aa9.67□□□□□ -0.86
CHRNA1-202ENST00000348749 SFRP5Q5T4F7 317 aa9.67□□□□□ -0.86
CHRNA1-202ENST00000348749 FAM71E1Q6IPT2 247 aa9.67□□□□□ -0.86
CHRNA1-202ENST00000348749 C1orf94Q6P1W5 598 aa9.67□□□□□ -0.86
CHRNA1-202ENST00000348749 PODNL1Q6PEZ8 512 aa9.67□□□□□ -0.86
CHRNA1-202ENST00000348749 DEF8Q6ZN54 512 aa9.67□□□□□ -0.86
CHRNA1-202ENST00000348749 SLCO4C1Q6ZQN7 724 aa9.67□□□□□ -0.86
CHRNA1-202ENST00000348749 Q6ZTK2 550 aa9.67□□□□□ -0.86
CHRNA1-202ENST00000348749 ZER1Q7Z7L7 766 aa9.67□□□□□ -0.86
CHRNA1-202ENST00000348749 PAQR7Q86WK9 346 aa9.67□□□□□ -0.86
CHRNA1-202ENST00000348749 HORMAD2Q8N7B1 307 aa9.67□□□□□ -0.86
CHRNA1-202ENST00000348749 OR5M9Q8NGP3 310 aa9.67□□□□□ -0.86
CHRNA1-202ENST00000348749 ZNF461Q8TAF7 563 aa9.67□□□□□ -0.86
CHRNA1-202ENST00000348749 TRMT10AQ8TBZ6 339 aaKnown RBP9.67□□□□□ -0.86
CHRNA1-202ENST00000348749 WFDC5Q8TCV5 224 aa9.67□□□□□ -0.86
CHRNA1-202ENST00000348749 ZDHHC1Q8WTX9 485 aa9.67□□□□□ -0.86
CHRNA1-202ENST00000348749 KAT2AQ92830 837 aa9.67□□□□□ -0.86
CHRNA1-202ENST00000348749 LRRC46Q96FV0 321 aa9.67□□□□□ -0.86
CHRNA1-202ENST00000348749 SEC22CQ9BRL7 303 aa9.67□□□□□ -0.86
CHRNA1-202ENST00000348749 IFT27Q9BW83 186 aa9.67□□□□□ -0.86
CHRNA1-202ENST00000348749 NKX6-2Q9C056 277 aaPredicted RBP9.67□□□□□ -0.86
CHRNA1-202ENST00000348749 DNTTIP1Q9H147 329 aa9.67□□□□□ -0.86
CHRNA1-202ENST00000348749 LRRN3Q9H3W5 708 aa9.67□□□□□ -0.86
CHRNA1-202ENST00000348749 ESRP2Q9H6T0 727 aaKnown RBP9.67□□□□□ -0.86
CHRNA1-202ENST00000348749 SLAMF7Q9NQ25 335 aa9.67□□□□□ -0.86
CHRNA1-202ENST00000348749 MGAT4CQ9UBM8 478 aa9.67□□□□□ -0.86
CHRNA1-202ENST00000348749 MAFFQ9ULX9 164 aa9.67□□□□□ -0.86
CHRNA1-202ENST00000348749 A4GNTQ9UNA3 340 aa9.67□□□□□ -0.86
CHRNA1-202ENST00000348749 HS3ST2Q9Y278 367 aa9.67□□□□□ -0.86
CHRNA1-202ENST00000348749 SLC9A8Q9Y2E8 581 aa9.67□□□□□ -0.86
CHRNA1-202ENST00000348749 PCDHGA9Q9Y5G4 932 aaKnown RBP9.67□□□□□ -0.86
CHRNA1-202ENST00000348749 PLXNA2O75051 1894 aa9.67□□□□□ -0.86
CHRNA1-202ENST00000348749 CCDC88CQ9P219 2028 aa9.67□□□□□ -0.86
CHRNA1-202ENST00000348749 THSD7BQ9C0I4 1608 aa9.66□□□□□ -0.86
CHRNA1-202ENST00000348749 A0A0G2JK05 382 aa9.66□□□□□ -0.86
CHRNA1-202ENST00000348749 A0A1B0GW55 424 aa9.66□□□□□ -0.86
CHRNA1-202ENST00000348749 TRABD2BA6NFA1 517 aa9.66□□□□□ -0.86
CHRNA1-202ENST00000348749 SULT1B1O43704 296 aa9.66□□□□□ -0.86
CHRNA1-202ENST00000348749 AQP8O94778 261 aa9.66□□□□□ -0.86
CHRNA1-202ENST00000348749 MT-ND4P03905 459 aa9.66□□□□□ -0.86
CHRNA1-202ENST00000348749 WNT1P04628 370 aa9.66□□□□□ -0.86
CHRNA1-202ENST00000348749 ANKRD34CP0C6C1 535 aa9.66□□□□□ -0.86
CHRNA1-202ENST00000348749 DUX4L2P0CJ85 424 aa9.66□□□□□ -0.86
CHRNA1-202ENST00000348749 DUX4L3P0CJ86 424 aa9.66□□□□□ -0.86
CHRNA1-202ENST00000348749 DUX4L4P0CJ87 422 aa9.66□□□□□ -0.86
CHRNA1-202ENST00000348749 DUX4L5P0CJ88 424 aa9.66□□□□□ -0.86
CHRNA1-202ENST00000348749 DUX4L6P0CJ89 424 aa9.66□□□□□ -0.86
CHRNA1-202ENST00000348749 DUX4L7P0CJ90 424 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms