RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 UBQLN4Q9NRR5 601 aa24.89■■□□□ 1.58
SSBP4-202ENST00000348495 CHST2Q9Y4C5 530 aa24.89■■□□□ 1.58
SSBP4-202ENST00000348495 V9GYQ6 96 aa24.89■■□□□ 1.58
SSBP4-202ENST00000348495 MED13Q9UHV7 2174 aa24.89■■□□□ 1.58
SSBP4-202ENST00000348495 ACACAQ13085 2346 aa24.89■■□□□ 1.57
SSBP4-202ENST00000348495 UTS2O95399 124 aa24.89■■□□□ 1.57
SSBP4-202ENST00000348495 ITGA3P26006 1051 aa24.89■■□□□ 1.57
SSBP4-202ENST00000348495 PRKAR1BP31321 381 aa24.89■■□□□ 1.57
SSBP4-202ENST00000348495 ZNF791Q3KP31 576 aaPredicted RBP24.89■■□□□ 1.57
SSBP4-202ENST00000348495 GRAMD1BQ3KR37 738 aa24.89■■□□□ 1.57
SSBP4-202ENST00000348495 ZNF311Q5JNZ3 666 aa24.89■■□□□ 1.57
SSBP4-202ENST00000348495 ACER2Q5QJU3 275 aa24.89■■□□□ 1.57
SSBP4-202ENST00000348495 DHRS4L2Q6PKH6 230 aa24.89■■□□□ 1.57
SSBP4-202ENST00000348495 VTCN1Q7Z7D3 282 aa24.89■■□□□ 1.57
SSBP4-202ENST00000348495 SPACA9Q96E40 222 aaPredicted RBP24.89■■□□□ 1.57
SSBP4-202ENST00000348495 HSH2DQ96JZ2 352 aa24.89■■□□□ 1.57
SSBP4-202ENST00000348495 ING2Q9H160 280 aa24.89■■□□□ 1.57
SSBP4-202ENST00000348495 ZBTB20Q9HC78 741 aaPredicted RBP24.89■■□□□ 1.57
SSBP4-202ENST00000348495 ZNF443Q9Y2A4 671 aaPredicted RBP24.89■■□□□ 1.57
SSBP4-202ENST00000348495 ICOSLGO75144 302 aa24.88■■□□□ 1.57
SSBP4-202ENST00000348495 DNAJB5O75953 348 aa24.88■■□□□ 1.57
SSBP4-202ENST00000348495 EPPINO95925 133 aa24.88■■□□□ 1.57
SSBP4-202ENST00000348495 NGFRP08138 427 aa24.88■■□□□ 1.57
SSBP4-202ENST00000348495 TBXA2RP21731 343 aa24.88■■□□□ 1.57
SSBP4-202ENST00000348495 SOX3P41225 446 aa24.88■■□□□ 1.57
SSBP4-202ENST00000348495 TMED10P49755 219 aaKnown RBP24.88■■□□□ 1.57
SSBP4-202ENST00000348495 FBXW4P57775 412 aa24.88■■□□□ 1.57
SSBP4-202ENST00000348495 KLHL26Q53HC5 615 aa24.88■■□□□ 1.57
SSBP4-202ENST00000348495 FRYQ5TBA9 3013 aa24.88■■□□□ 1.57
SSBP4-202ENST00000348495 COMTD1Q86VU5 262 aa24.88■■□□□ 1.57
SSBP4-202ENST00000348495 GALNT16Q8N428 558 aa24.88■■□□□ 1.57
SSBP4-202ENST00000348495 APOBEC4Q8WW27 367 aaKnown RBP24.88■■□□□ 1.57
SSBP4-202ENST00000348495 LZICQ8WZA0 190 aa24.88■■□□□ 1.57
SSBP4-202ENST00000348495 HGDQ93099 445 aa24.88■■□□□ 1.57
SSBP4-202ENST00000348495 TPD52L3Q96J77 140 aa24.88■■□□□ 1.57
SSBP4-202ENST00000348495 PINK1Q9BXM7 581 aa24.88■■□□□ 1.57
SSBP4-202ENST00000348495 CCM2LQ9NUG4 571 aaPredicted RBP24.88■■□□□ 1.57
SSBP4-202ENST00000348495 ANAPC2Q9UJX6 822 aa24.88■■□□□ 1.57
SSBP4-202ENST00000348495 BAG5Q9UL15 447 aa24.88■■□□□ 1.57
SSBP4-202ENST00000348495 SEMG1P04279 462 aa24.87■■□□□ 1.57
SSBP4-202ENST00000348495 NID1P14543 1247 aa24.87■■□□□ 1.57
SSBP4-202ENST00000348495 IL7RP16871 459 aa24.87■■□□□ 1.57
SSBP4-202ENST00000348495 PSMA4P25789 261 aaKnown RBP24.87■■□□□ 1.57
SSBP4-202ENST00000348495 SSR4P51571 173 aa24.87■■□□□ 1.57
SSBP4-202ENST00000348495 KCNJ10P78508 379 aa24.87■■□□□ 1.57
SSBP4-202ENST00000348495 EFR3AQ14156 821 aa24.87■■□□□ 1.57
SSBP4-202ENST00000348495 NTRK2Q16620 822 aa24.87■■□□□ 1.57
SSBP4-202ENST00000348495 GLIPR1L2Q4G1C9 344 aa24.87■■□□□ 1.57
SSBP4-202ENST00000348495 PDZK1Q5T2W1 519 aa24.87■■□□□ 1.57
SSBP4-202ENST00000348495 NUP54Q7Z3B4 507 aa24.87■■□□□ 1.57
SSBP4-202ENST00000348495 C10orf67Q8IYJ2 551 aa24.87■■□□□ 1.57
SSBP4-202ENST00000348495 ZNF354BQ96LW1 612 aa24.87■■□□□ 1.57
SSBP4-202ENST00000348495 UGT2B28Q9BY64 529 aa24.87■■□□□ 1.57
SSBP4-202ENST00000348495 MAGIXQ9H6Y5 334 aa24.87■■□□□ 1.57
SSBP4-202ENST00000348495 ZNF232Q9UNY5 417 aa24.87■■□□□ 1.57
SSBP4-202ENST00000348495 OR6B1O95007 311 aa24.86■■□□□ 1.57
SSBP4-202ENST00000348495 OXSR1O95747 527 aaPredicted RBP24.86■■□□□ 1.57
SSBP4-202ENST00000348495 FESP07332 822 aa24.86■■□□□ 1.57
SSBP4-202ENST00000348495 SLC7A1P30825 629 aa24.86■■□□□ 1.57
SSBP4-202ENST00000348495 EEF1A1P68104 462 aaKnown RBP24.86■■□□□ 1.57
SSBP4-202ENST00000348495 LARS2Q15031 903 aaKnown RBP24.86■■□□□ 1.57
SSBP4-202ENST00000348495 MEP1AQ16819 746 aa24.86■■□□□ 1.57
SSBP4-202ENST00000348495 OPN5Q6U736 354 aa24.86■■□□□ 1.57
SSBP4-202ENST00000348495 ZNF836Q6ZNA1 936 aa24.86■■□□□ 1.57
SSBP4-202ENST00000348495 PAPD5Q8NDF8 572 aaKnown RBP24.86■■□□□ 1.57
SSBP4-202ENST00000348495 RNF138Q8WVD3 245 aa24.86■■□□□ 1.57
SSBP4-202ENST00000348495 PYDC1Q8WXC3 89 aa24.86■■□□□ 1.57
SSBP4-202ENST00000348495 TRIM45Q9H8W5 580 aaPredicted RBP24.86■■□□□ 1.57
SSBP4-202ENST00000348495 MED19A0JLT2 244 aaPredicted RBP24.86■■□□□ 1.57
SSBP4-202ENST00000348495 CLDN24A6NM45 220 aa24.86■■□□□ 1.57
SSBP4-202ENST00000348495 RRP8O43159 456 aaKnown RBP24.86■■□□□ 1.57
SSBP4-202ENST00000348495 HS6ST1O60243 411 aa24.86■■□□□ 1.57
SSBP4-202ENST00000348495 LIN52Q52LA3 116 aa24.86■■□□□ 1.57
SSBP4-202ENST00000348495 RNF220Q5VTB9 566 aa24.86■■□□□ 1.57
SSBP4-202ENST00000348495 DND1Q8IYX4 353 aaKnown RBP24.86■■□□□ 1.57
SSBP4-202ENST00000348495 TTC9Q92623 222 aa24.86■■□□□ 1.57
SSBP4-202ENST00000348495 SEPHS2Q99611 448 aa24.86■■□□□ 1.57
SSBP4-202ENST00000348495 DTNAQ9Y4J8 743 aa24.86■■□□□ 1.57
SSBP4-202ENST00000348495 H3BNX3 289 aa24.85■■□□□ 1.57
SSBP4-202ENST00000348495 SYT5O00445 386 aa24.85■■□□□ 1.57
SSBP4-202ENST00000348495 PLAURQ03405 335 aa24.85■■□□□ 1.57
SSBP4-202ENST00000348495 TLE3Q04726 772 aa24.85■■□□□ 1.57
SSBP4-202ENST00000348495 FGFBP1Q14512 234 aa24.85■■□□□ 1.57
SSBP4-202ENST00000348495 APOOLQ6UXV4 268 aa24.85■■□□□ 1.57
SSBP4-202ENST00000348495 CCDC81Q6ZN84 652 aa24.85■■□□□ 1.57
SSBP4-202ENST00000348495 CLIP4Q8N3C7 705 aa24.85■■□□□ 1.57
SSBP4-202ENST00000348495 ASB15Q8WXK1 588 aa24.85■■□□□ 1.57
SSBP4-202ENST00000348495 SLC47A1Q96FL8 570 aa24.85■■□□□ 1.57
SSBP4-202ENST00000348495 CACYBPQ9HB71 228 aaKnown RBP24.85■■□□□ 1.57
SSBP4-202ENST00000348495 TEKT2Q9UIF3 430 aa24.85■■□□□ 1.57
SSBP4-202ENST00000348495 ZFHX4Q86UP3 3567 aa24.84■■□□□ 1.57
SSBP4-202ENST00000348495 MGRN1O60291 552 aa24.84■■□□□ 1.57
SSBP4-202ENST00000348495 FADS1O60427 444 aa24.84■■□□□ 1.57
SSBP4-202ENST00000348495 LGI1O95970 557 aa24.84■■□□□ 1.57
SSBP4-202ENST00000348495 DEFB109BQ30KR1 87 aa24.84■■□□□ 1.57
SSBP4-202ENST00000348495 FAM98BQ52LJ0 330 aaKnown RBP24.84■■□□□ 1.57
SSBP4-202ENST00000348495 FNDC7Q5VTL7 733 aa24.84■■□□□ 1.57
SSBP4-202ENST00000348495 ZFP1Q6P2D0 407 aa24.84■■□□□ 1.57
SSBP4-202ENST00000348495 AAGABQ6PD74 315 aa24.84■■□□□ 1.57
SSBP4-202ENST00000348495 FKBP9P1Q75LS8 142 aa24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms