RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 DNASE1L1P49184 302 aa10.84□□□□□ -0.67
SNCA-202ENST00000345009 MNAT1P51948 309 aa10.84□□□□□ -0.67
SNCA-202ENST00000345009 MLLT10P55197 1068 aa10.84□□□□□ -0.67
SNCA-202ENST00000345009 CASP9P55211 416 aa10.84□□□□□ -0.67
SNCA-202ENST00000345009 DSTNP60981 165 aa10.84□□□□□ -0.67
SNCA-202ENST00000345009 PPIAP62937 165 aaKnown RBP10.84□□□□□ -0.67
SNCA-202ENST00000345009 C17orf67Q0P5P2 114 aa10.84□□□□□ -0.67
SNCA-202ENST00000345009 ART3Q13508 389 aa10.84□□□□□ -0.67
SNCA-202ENST00000345009 ELOAQ14241 798 aaKnown RBP10.84□□□□□ -0.67
SNCA-202ENST00000345009 RGNQ15493 299 aa10.84□□□□□ -0.67
SNCA-202ENST00000345009 TRMT5Q32P41 509 aaKnown RBP10.84□□□□□ -0.67
SNCA-202ENST00000345009 FLYWCH1Q4VC44 716 aa10.84□□□□□ -0.67
SNCA-202ENST00000345009 GPAT3Q53EU6 434 aa10.84□□□□□ -0.67
SNCA-202ENST00000345009 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.84□□□□□ -0.67
SNCA-202ENST00000345009 HEPHL1Q6MZM0 1159 aa10.84□□□□□ -0.67
SNCA-202ENST00000345009 ATCAYQ86WG3 371 aa10.84□□□□□ -0.67
SNCA-202ENST00000345009 MISPQ8IVT2 679 aa10.84□□□□□ -0.67
SNCA-202ENST00000345009 OR1J4Q8NGS1 313 aa10.84□□□□□ -0.67
SNCA-202ENST00000345009 PNPT1Q8TCS8 783 aaKnown RBP10.84□□□□□ -0.67
SNCA-202ENST00000345009 RAB8BQ92930 207 aa10.84□□□□□ -0.67
SNCA-202ENST00000345009 ROPN1LQ96C74 230 aa10.84□□□□□ -0.67
SNCA-202ENST00000345009 OTUB1Q96FW1 271 aaPredicted RBP10.84□□□□□ -0.67
SNCA-202ENST00000345009 TMEM41AQ96HV5 264 aa10.84□□□□□ -0.67
SNCA-202ENST00000345009 FRMD6Q96NE9 622 aa10.84□□□□□ -0.67
SNCA-202ENST00000345009 NODALQ96S42 347 aa10.84□□□□□ -0.67
SNCA-202ENST00000345009 SDF2Q99470 211 aa10.84□□□□□ -0.67
SNCA-202ENST00000345009 CGREF1Q99674 301 aa10.84□□□□□ -0.67
SNCA-202ENST00000345009 CCDC106Q9BWC9 280 aa10.84□□□□□ -0.67
SNCA-202ENST00000345009 MTHFD2LQ9H903 347 aaPredicted RBP10.84□□□□□ -0.67
SNCA-202ENST00000345009 QPCTLQ9NXS2 382 aa10.84□□□□□ -0.67
SNCA-202ENST00000345009 VAPAQ9P0L0 249 aa10.84□□□□□ -0.67
SNCA-202ENST00000345009 P2RX2Q9UBL9 471 aa10.84□□□□□ -0.67
SNCA-202ENST00000345009 AP3M1Q9Y2T2 418 aa10.84□□□□□ -0.67
SNCA-202ENST00000345009 WDR45Q9Y484 360 aa10.84□□□□□ -0.67
SNCA-202ENST00000345009 GMEB1Q9Y692 573 aa10.84□□□□□ -0.67
SNCA-202ENST00000345009 SMG1Q96Q15 3661 aaKnown RBP10.83□□□□□ -0.68
SNCA-202ENST00000345009 C5orf58C9J3I9 102 aa10.83□□□□□ -0.68
SNCA-202ENST00000345009 HMGN4O00479 90 aa10.83□□□□□ -0.68
SNCA-202ENST00000345009 NDUFB5O43674 189 aa10.83□□□□□ -0.68
SNCA-202ENST00000345009 FADS1O60427 444 aa10.83□□□□□ -0.68
SNCA-202ENST00000345009 CBR3O75828 277 aa10.83□□□□□ -0.68
SNCA-202ENST00000345009 UNC5CO95185 931 aa10.83□□□□□ -0.68
SNCA-202ENST00000345009 GCKP35557 465 aa10.83□□□□□ -0.68
SNCA-202ENST00000345009 CRISP3P54108 245 aa10.83□□□□□ -0.68
SNCA-202ENST00000345009 ATP12AP54707 1039 aa10.83□□□□□ -0.68
SNCA-202ENST00000345009 TLE1Q04724 770 aa10.83□□□□□ -0.68
SNCA-202ENST00000345009 RBPJQ06330 500 aa10.83□□□□□ -0.68
SNCA-202ENST00000345009 SLC10A1Q14973 349 aa10.83□□□□□ -0.68
SNCA-202ENST00000345009 HYAL4Q2M3T9 481 aa10.83□□□□□ -0.68
SNCA-202ENST00000345009 RUNDC3AQ59EK9 446 aa10.83□□□□□ -0.68
SNCA-202ENST00000345009 COLEC12Q5KU26 742 aa10.83□□□□□ -0.68
SNCA-202ENST00000345009 CCNJQ5T5M9 372 aa10.83□□□□□ -0.68
SNCA-202ENST00000345009 TIGD3Q6B0B8 471 aa10.83□□□□□ -0.68
SNCA-202ENST00000345009 DLEU7Q6UYE1 221 aa10.83□□□□□ -0.68
SNCA-202ENST00000345009 FAM109AQ8N4B1 249 aa10.83□□□□□ -0.68
SNCA-202ENST00000345009 METTL25Q8N6Q8 603 aa10.83□□□□□ -0.68
SNCA-202ENST00000345009 BCAS4Q8TDM0 211 aa10.83□□□□□ -0.68
SNCA-202ENST00000345009 NR4A3Q92570 626 aa10.83□□□□□ -0.68
SNCA-202ENST00000345009 LRRC58Q96CX6 371 aa10.83□□□□□ -0.68
SNCA-202ENST00000345009 AURKBQ96GD4 344 aaPredicted RBP10.83□□□□□ -0.68
SNCA-202ENST00000345009 ANKRD27Q96NW4 1050 aa10.83□□□□□ -0.68
SNCA-202ENST00000345009 TAAR6Q96RI8 345 aa10.83□□□□□ -0.68
SNCA-202ENST00000345009 TTTY12Q9BZ98 90 aa10.83□□□□□ -0.68
SNCA-202ENST00000345009 MYLK2Q9H1R3 596 aa10.83□□□□□ -0.68
SNCA-202ENST00000345009 SERHL2Q9H4I8 314 aa10.83□□□□□ -0.68
SNCA-202ENST00000345009 PTGES2Q9H7Z7 377 aa10.83□□□□□ -0.68
SNCA-202ENST00000345009 SLC6A13Q9NSD5 602 aa10.83□□□□□ -0.68
SNCA-202ENST00000345009 DEPPQ9NTK1 212 aa10.83□□□□□ -0.68
SNCA-202ENST00000345009 ASF1BQ9NVP2 202 aa10.83□□□□□ -0.68
SNCA-202ENST00000345009 TUBA8Q9NY65 449 aaPredicted RBP10.83□□□□□ -0.68
SNCA-202ENST00000345009 SLAMF8Q9P0V8 285 aa10.83□□□□□ -0.68
SNCA-202ENST00000345009 PPP4R1LQ9P1A2 415 aa10.83□□□□□ -0.68
SNCA-202ENST00000345009 WIF1Q9Y5W5 379 aa10.83□□□□□ -0.68
SNCA-202ENST00000345009 KCNE3Q9Y6H6 103 aa10.83□□□□□ -0.68
SNCA-202ENST00000345009 C15orf38-AP3S2A0A0A6YYH1 394 aa10.82□□□□□ -0.68
SNCA-202ENST00000345009 A0A1W2PQD3 144 aa10.82□□□□□ -0.68
SNCA-202ENST00000345009 ALG1L2C9J202 215 aa10.82□□□□□ -0.68
SNCA-202ENST00000345009 NPIPA5E9PKD4 350 aa10.82□□□□□ -0.68
SNCA-202ENST00000345009 GTPBP1O00178 669 aaKnown RBP10.82□□□□□ -0.68
SNCA-202ENST00000345009 FBP2O00757 339 aa10.82□□□□□ -0.68
SNCA-202ENST00000345009 AIM2O14862 343 aa10.82□□□□□ -0.68
SNCA-202ENST00000345009 SCO2O43819 266 aa10.82□□□□□ -0.68
SNCA-202ENST00000345009 TRIM3O75382 744 aaPredicted RBP10.82□□□□□ -0.68
SNCA-202ENST00000345009 C1QL1O75973 258 aa10.82□□□□□ -0.68
SNCA-202ENST00000345009 OXSR1O95747 527 aaPredicted RBP10.82□□□□□ -0.68
SNCA-202ENST00000345009 IGKV1D-16P01601 117 aa10.82□□□□□ -0.68
SNCA-202ENST00000345009 ETFAP13804 333 aa10.82□□□□□ -0.68
SNCA-202ENST00000345009 EDN3P14138 238 aa10.82□□□□□ -0.68
SNCA-202ENST00000345009 SNRPBP14678 240 aaKnown RBP10.82□□□□□ -0.68
SNCA-202ENST00000345009 GPX2P18283 190 aa10.82□□□□□ -0.68
SNCA-202ENST00000345009 SLC6A2P23975 617 aa10.82□□□□□ -0.68
SNCA-202ENST00000345009 MSX1P28360 303 aa10.82□□□□□ -0.68
SNCA-202ENST00000345009 PMP22Q01453 160 aa10.82□□□□□ -0.68
SNCA-202ENST00000345009 FOXO1Q12778 655 aa10.82□□□□□ -0.68
SNCA-202ENST00000345009 TOMM20Q15388 145 aa10.82□□□□□ -0.68
SNCA-202ENST00000345009 GPR68Q15743 365 aa10.82□□□□□ -0.68
SNCA-202ENST00000345009 GRAMD1BQ3KR37 738 aa10.82□□□□□ -0.68
SNCA-202ENST00000345009 GTDC1Q4AE62 458 aa10.82□□□□□ -0.68
SNCA-202ENST00000345009 COX20Q5RI15 118 aa10.82□□□□□ -0.68
SNCA-202ENST00000345009 GCNT6Q5T4J0 391 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms