RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 WDR36Q8NI36 951 aaKnown RBP13.63□□□□□ -0.23
CXCL12-201ENST00000343575 SLC9A6Q92581 669 aa13.63□□□□□ -0.23
CXCL12-201ENST00000343575 MR1Q95460 341 aa13.63□□□□□ -0.23
CXCL12-201ENST00000343575 ZPBPQ9BS86 351 aa13.63□□□□□ -0.23
CXCL12-201ENST00000343575 OR10A5Q9H207 317 aa13.63□□□□□ -0.23
CXCL12-201ENST00000343575 PIGUQ9H490 435 aa13.63□□□□□ -0.23
CXCL12-201ENST00000343575 WDR54Q9H977 334 aa13.63□□□□□ -0.23
CXCL12-201ENST00000343575 FOLH1BQ9HBA9 442 aa13.63□□□□□ -0.23
CXCL12-201ENST00000343575 WARS2Q9UGM6 360 aaKnown RBP13.63□□□□□ -0.23
CXCL12-201ENST00000343575 BAG5Q9UL15 447 aa13.63□□□□□ -0.23
CXCL12-201ENST00000343575 IGHV3-20A0A0C4DH32 117 aa13.62□□□□□ -0.23
CXCL12-201ENST00000343575 MRPS14O60783 128 aaKnown RBP13.62□□□□□ -0.23
CXCL12-201ENST00000343575 SEMG1P04279 462 aa13.62□□□□□ -0.23
CXCL12-201ENST00000343575 CEACAM1P13688 526 aa13.62□□□□□ -0.23
CXCL12-201ENST00000343575 TNNI3P19429 210 aa13.62□□□□□ -0.23
CXCL12-201ENST00000343575 CHRNB3Q05901 458 aa13.62□□□□□ -0.23
CXCL12-201ENST00000343575 RFX4Q33E94 735 aa13.62□□□□□ -0.23
CXCL12-201ENST00000343575 ZCCHC12Q6PEW1 402 aa13.62□□□□□ -0.23
CXCL12-201ENST00000343575 NPSR1Q6W5P4 371 aa13.62□□□□□ -0.23
CXCL12-201ENST00000343575 EIF3MQ7L2H7 374 aaKnown RBP13.62□□□□□ -0.23
CXCL12-201ENST00000343575 ANKRD37Q7Z713 158 aa13.62□□□□□ -0.23
CXCL12-201ENST00000343575 VTCN1Q7Z7D3 282 aa13.62□□□□□ -0.23
CXCL12-201ENST00000343575 ZDHHC13Q8IUH4 622 aa13.62□□□□□ -0.23
CXCL12-201ENST00000343575 CACTIN-AS1Q8N1I8 211 aa13.62□□□□□ -0.23
CXCL12-201ENST00000343575 CDRT4Q8N9R6 151 aa13.62□□□□□ -0.23
CXCL12-201ENST00000343575 SLC2A12Q8TD20 617 aa13.62□□□□□ -0.23
CXCL12-201ENST00000343575 ADAMTS15Q8TE58 950 aa13.62□□□□□ -0.23
CXCL12-201ENST00000343575 PIK3R3Q92569 461 aa13.62□□□□□ -0.23
CXCL12-201ENST00000343575 ZG16BQ96DA0 208 aa13.62□□□□□ -0.23
CXCL12-201ENST00000343575 ZNF578Q96N58 590 aaPredicted RBP13.62□□□□□ -0.23
CXCL12-201ENST00000343575 WDR77Q9BQA1 342 aaPredicted RBP13.62□□□□□ -0.23
CXCL12-201ENST00000343575 LMF2Q9BU23 707 aaKnown RBP13.62□□□□□ -0.23
CXCL12-201ENST00000343575 FUNDC2Q9BWH2 189 aa13.62□□□□□ -0.23
CXCL12-201ENST00000343575 UGT2B28Q9BY64 529 aa13.62□□□□□ -0.23
CXCL12-201ENST00000343575 SLC38A1Q9H2H9 487 aa13.62□□□□□ -0.23
CXCL12-201ENST00000343575 BCL2L10Q9HD36 194 aa13.62□□□□□ -0.23
CXCL12-201ENST00000343575 DUSP22Q9NRW4 184 aa13.62□□□□□ -0.23
CXCL12-201ENST00000343575 FBXO34Q9NWN3 711 aa13.62□□□□□ -0.23
CXCL12-201ENST00000343575 P2RX2Q9UBL9 471 aa13.62□□□□□ -0.23
CXCL12-201ENST00000343575 C3orf18Q9UK00 162 aa13.62□□□□□ -0.23
CXCL12-201ENST00000343575 ISPDA4D126 451 aa13.61□□□□□ -0.23
CXCL12-201ENST00000343575 PRAMEF25A6NGN4 478 aa13.61□□□□□ -0.23
CXCL12-201ENST00000343575 A8MVJ9 347 aa13.61□□□□□ -0.23
CXCL12-201ENST00000343575 SLC28A2O43868 658 aa13.61□□□□□ -0.23
CXCL12-201ENST00000343575 FCMRO60667 390 aa13.61□□□□□ -0.23
CXCL12-201ENST00000343575 ALOX12BO75342 701 aa13.61□□□□□ -0.23
CXCL12-201ENST00000343575 NKX2-2O95096 273 aa13.61□□□□□ -0.23
CXCL12-201ENST00000343575 MT-ND1P03886 318 aa13.61□□□□□ -0.23
CXCL12-201ENST00000343575 HEXBP07686 556 aa13.61□□□□□ -0.23
CXCL12-201ENST00000343575 UMODP07911 640 aa13.61□□□□□ -0.23
CXCL12-201ENST00000343575 CCDC159P0C7I6 412 aa13.61□□□□□ -0.23
CXCL12-201ENST00000343575 GSTT2P0CG29 244 aa13.61□□□□□ -0.23
CXCL12-201ENST00000343575 GSTT2BP0CG30 244 aa13.61□□□□□ -0.23
CXCL12-201ENST00000343575 NR2F1P10589 423 aa13.61□□□□□ -0.23
CXCL12-201ENST00000343575 IDUAP35475 653 aa13.61□□□□□ -0.23
CXCL12-201ENST00000343575 EMP2P54851 167 aa13.61□□□□□ -0.23
CXCL12-201ENST00000343575 TPD52P55327 224 aaPredicted RBP13.61□□□□□ -0.23
CXCL12-201ENST00000343575 CDC20Q12834 499 aa13.61□□□□□ -0.23
CXCL12-201ENST00000343575 IQCCQ4KMZ1 466 aa13.61□□□□□ -0.23
CXCL12-201ENST00000343575 TMEM205Q6UW68 189 aa13.61□□□□□ -0.23
CXCL12-201ENST00000343575 TSEN54Q7Z6J9 526 aaKnown RBP13.61□□□□□ -0.23
CXCL12-201ENST00000343575 LACC1Q8IV20 430 aa13.61□□□□□ -0.23
CXCL12-201ENST00000343575 EID3Q8N140 333 aa13.61□□□□□ -0.23
CXCL12-201ENST00000343575 C17orf50Q8WW18 174 aa13.61□□□□□ -0.23
CXCL12-201ENST00000343575 ZNF566Q969W8 418 aa13.61□□□□□ -0.23
CXCL12-201ENST00000343575 RNF145Q96MT1 663 aa13.61□□□□□ -0.23
CXCL12-201ENST00000343575 NUDT9Q9BW91 350 aa13.61□□□□□ -0.23
CXCL12-201ENST00000343575 ADNPQ9H2P0 1102 aa13.61□□□□□ -0.23
CXCL12-201ENST00000343575 MOV10Q9HCE1 1003 aaKnown RBP13.61□□□□□ -0.23
CXCL12-201ENST00000343575 ANGPT4Q9Y264 503 aa13.61□□□□□ -0.23
CXCL12-201ENST00000343575 CLCA3PQ9Y6N3 262 aa13.61□□□□□ -0.23
CXCL12-201ENST00000343575 PTPRBP23467 1997 aa13.61□□□□□ -0.23
CXCL12-201ENST00000343575 DSPPQ9NZW4 1301 aa13.61□□□□□ -0.23
CXCL12-201ENST00000343575 GXYLT2A0PJZ3 443 aa13.61□□□□□ -0.23
CXCL12-201ENST00000343575 DUXAA6NLW8 204 aa13.61□□□□□ -0.23
CXCL12-201ENST00000343575 PRKNO60260 465 aaPredicted RBP13.61□□□□□ -0.23
CXCL12-201ENST00000343575 PRAMEF2O60811 474 aa13.61□□□□□ -0.23
CXCL12-201ENST00000343575 MFN2O95140 757 aa13.61□□□□□ -0.23
CXCL12-201ENST00000343575 GABARAPO95166 117 aa13.61□□□□□ -0.23
CXCL12-201ENST00000343575 CT45A8P0DMV1 189 aa13.61□□□□□ -0.23
CXCL12-201ENST00000343575 CT45A9P0DMV2 189 aa13.61□□□□□ -0.23
CXCL12-201ENST00000343575 FUT4P22083 530 aa13.61□□□□□ -0.23
CXCL12-201ENST00000343575 ELK4P28324 431 aa13.61□□□□□ -0.23
CXCL12-201ENST00000343575 YAP1P46937 504 aaKnown RBP13.61□□□□□ -0.23
CXCL12-201ENST00000343575 PCYT1AP49585 367 aa13.61□□□□□ -0.23
CXCL12-201ENST00000343575 RAD23AP54725 363 aa13.61□□□□□ -0.23
CXCL12-201ENST00000343575 SELENOWP63302 87 aa13.61□□□□□ -0.23
CXCL12-201ENST00000343575 NCF4Q15080 339 aa13.61□□□□□ -0.23
CXCL12-201ENST00000343575 DUSP7Q16829 419 aa13.61□□□□□ -0.23
CXCL12-201ENST00000343575 CT45A2Q5DJT8 189 aa13.61□□□□□ -0.23
CXCL12-201ENST00000343575 CCNJQ5T5M9 372 aa13.61□□□□□ -0.23
CXCL12-201ENST00000343575 NFAM1Q8NET5 270 aaPredicted RBP13.61□□□□□ -0.23
CXCL12-201ENST00000343575 OR4N2Q8NGD1 307 aa13.61□□□□□ -0.23
CXCL12-201ENST00000343575 PHF10Q8WUB8 498 aaKnown RBP13.61□□□□□ -0.23
CXCL12-201ENST00000343575 PYURFQ96I23 114 aa13.61□□□□□ -0.23
CXCL12-201ENST00000343575 TRNT1Q96Q11 434 aaKnown RBP13.61□□□□□ -0.23
CXCL12-201ENST00000343575 STACQ99469 402 aa13.61□□□□□ -0.23
CXCL12-201ENST00000343575 SDF2Q99470 211 aa13.61□□□□□ -0.23
CXCL12-201ENST00000343575 RBM4BQ9BQ04 359 aaKnown RBP13.61□□□□□ -0.23
CXCL12-201ENST00000343575 RBM4Q9BWF3 364 aaKnown RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms