RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 SH2B3Q9UQQ2 575 aa11.68□□□□□ -0.54
SNRNP48-201ENST00000342415 MAB21L2Q9Y586 359 aa11.68□□□□□ -0.54
SNRNP48-201ENST00000342415 HYKKA2RU49 373 aa11.68□□□□□ -0.54
SNRNP48-201ENST00000342415 HRO43593 1189 aa11.68□□□□□ -0.54
SNRNP48-201ENST00000342415 APOC3P02656 99 aa11.68□□□□□ -0.54
SNRNP48-201ENST00000342415 ACP2P11117 423 aa11.68□□□□□ -0.54
SNRNP48-201ENST00000342415 ARSBP15848 533 aa11.68□□□□□ -0.54
SNRNP48-201ENST00000342415 GUCA1AP43080 201 aaPredicted RBP11.68□□□□□ -0.54
SNRNP48-201ENST00000342415 ENPP2Q13822 863 aa11.68□□□□□ -0.54
SNRNP48-201ENST00000342415 TAF13Q15543 124 aa11.68□□□□□ -0.54
SNRNP48-201ENST00000342415 TMEM163Q8TC26 289 aa11.68□□□□□ -0.54
SNRNP48-201ENST00000342415 PHOSPHO1Q8TCT1 267 aa11.68□□□□□ -0.54
SNRNP48-201ENST00000342415 PRRC1Q96M27 445 aa11.68□□□□□ -0.54
SNRNP48-201ENST00000342415 OR52D1Q9H346 318 aa11.68□□□□□ -0.54
SNRNP48-201ENST00000342415 SLA2Q9H6Q3 261 aa11.68□□□□□ -0.54
SNRNP48-201ENST00000342415 FOLH1BQ9HBA9 442 aa11.68□□□□□ -0.54
SNRNP48-201ENST00000342415 STARD5Q9NSY2 213 aa11.68□□□□□ -0.54
SNRNP48-201ENST00000342415 RBFOX1Q9NWB1 397 aaKnown RBP11.68□□□□□ -0.54
SNRNP48-201ENST00000342415 CCL27Q9Y4X3 112 aa11.68□□□□□ -0.54
SNRNP48-201ENST00000342415 INSL6Q9Y581 213 aa11.68□□□□□ -0.54
SNRNP48-201ENST00000342415 UBXN7O94888 489 aa11.67□□□□□ -0.54
SNRNP48-201ENST00000342415 INHBBP09529 407 aa11.67□□□□□ -0.54
SNRNP48-201ENST00000342415 CHRNB1P11230 501 aa11.67□□□□□ -0.54
SNRNP48-201ENST00000342415 VAMP1P23763 118 aa11.67□□□□□ -0.54
SNRNP48-201ENST00000342415 CTGFP29279 349 aa11.67□□□□□ -0.54
SNRNP48-201ENST00000342415 MAGEA2P43356 314 aa11.67□□□□□ -0.54
SNRNP48-201ENST00000342415 FAPQ12884 760 aa11.67□□□□□ -0.54
SNRNP48-201ENST00000342415 C1orf61Q13536 156 aa11.67□□□□□ -0.54
SNRNP48-201ENST00000342415 GAS6Q14393 721 aa11.67□□□□□ -0.54
SNRNP48-201ENST00000342415 PRRT3Q5FWE3 981 aa11.67□□□□□ -0.54
SNRNP48-201ENST00000342415 TMEM69Q5SWH9 247 aa11.67□□□□□ -0.54
SNRNP48-201ENST00000342415 FAM27D1Q5T7N8 215 aa11.67□□□□□ -0.54
SNRNP48-201ENST00000342415 FAM71E1Q6IPT2 247 aa11.67□□□□□ -0.54
SNRNP48-201ENST00000342415 ESPNLQ6ZVH7 1005 aa11.67□□□□□ -0.54
SNRNP48-201ENST00000342415 PRICKLE2Q7Z3G6 844 aa11.67□□□□□ -0.54
SNRNP48-201ENST00000342415 NRROSQ86YC3 692 aa11.67□□□□□ -0.54
SNRNP48-201ENST00000342415 NKAIN4Q8IVV8 208 aa11.67□□□□□ -0.54
SNRNP48-201ENST00000342415 OR6N2Q8NGY6 317 aa11.67□□□□□ -0.54
SNRNP48-201ENST00000342415 OR56A3Q8NH54 315 aa11.67□□□□□ -0.54
SNRNP48-201ENST00000342415 TSACCQ96A04 125 aaPredicted RBP11.67□□□□□ -0.54
SNRNP48-201ENST00000342415 TM4SF18Q96CE8 201 aa11.67□□□□□ -0.54
SNRNP48-201ENST00000342415 S100A16Q96FQ6 103 aaKnown RBP11.67□□□□□ -0.54
SNRNP48-201ENST00000342415 AHCYL2Q96HN2 611 aaKnown RBP11.67□□□□□ -0.54
SNRNP48-201ENST00000342415 HHATLQ9HCP6 504 aa11.67□□□□□ -0.54
SNRNP48-201ENST00000342415 A0A1W2PQU0 124 aa11.67□□□□□ -0.54
SNRNP48-201ENST00000342415 HIDE1A8MVS5 230 aa11.67□□□□□ -0.54
SNRNP48-201ENST00000342415 IFNA6P05013 189 aa11.67□□□□□ -0.54
SNRNP48-201ENST00000342415 TRIM23P36406 574 aa11.67□□□□□ -0.54
SNRNP48-201ENST00000342415 EIF1AXP47813 144 aaKnown RBP11.67□□□□□ -0.54
SNRNP48-201ENST00000342415 ADAM8P78325 824 aa11.67□□□□□ -0.54
SNRNP48-201ENST00000342415 PLK5Q496M5 336 aa11.67□□□□□ -0.54
SNRNP48-201ENST00000342415 CCDC58Q4VC31 144 aa11.67□□□□□ -0.54
SNRNP48-201ENST00000342415 MPP7Q5T2T1 576 aa11.67□□□□□ -0.54
SNRNP48-201ENST00000342415 RPTNQ6XPR3 784 aa11.67□□□□□ -0.54
SNRNP48-201ENST00000342415 FOXRED2Q8IWF2 684 aa11.67□□□□□ -0.54
SNRNP48-201ENST00000342415 LRRC25Q8N386 305 aaPredicted RBP11.67□□□□□ -0.54
SNRNP48-201ENST00000342415 JAGN1Q8N5M9 183 aa11.67□□□□□ -0.54
SNRNP48-201ENST00000342415 KLHL42Q9P2K6 505 aa11.67□□□□□ -0.54
SNRNP48-201ENST00000342415 ZNF879B4DU55 563 aa11.67□□□□□ -0.54
SNRNP48-201ENST00000342415 VEGFDO43915 354 aa11.67□□□□□ -0.54
SNRNP48-201ENST00000342415 WISP3O95389 354 aaPredicted RBP11.67□□□□□ -0.54
SNRNP48-201ENST00000342415 DRD2P14416 443 aa11.67□□□□□ -0.54
SNRNP48-201ENST00000342415 KCNJ5P48544 419 aa11.67□□□□□ -0.54
SNRNP48-201ENST00000342415 CCR6P51684 374 aa11.67□□□□□ -0.54
SNRNP48-201ENST00000342415 WDR45BQ5MNZ6 344 aa11.67□□□□□ -0.54
SNRNP48-201ENST00000342415 GID4Q8IVV7 300 aa11.67□□□□□ -0.54
SNRNP48-201ENST00000342415 OR5M3Q8NGP4 307 aa11.67□□□□□ -0.54
SNRNP48-201ENST00000342415 ADAMTS19Q8TE59 1207 aa11.67□□□□□ -0.54
SNRNP48-201ENST00000342415 C5orf34Q96MH7 638 aa11.67□□□□□ -0.54
SNRNP48-201ENST00000342415 OR7D2Q96RA2 312 aa11.67□□□□□ -0.54
SNRNP48-201ENST00000342415 GPR174Q9BXC1 333 aa11.67□□□□□ -0.54
SNRNP48-201ENST00000342415 GABARAPL3Q9BY60 117 aa11.67□□□□□ -0.54
SNRNP48-201ENST00000342415 LIPT1Q9Y234 373 aa11.67□□□□□ -0.54
SNRNP48-201ENST00000342415 ATG4BQ9Y4P1 393 aa11.67□□□□□ -0.54
SNRNP48-201ENST00000342415 A0A087WUU8 490 aa11.66□□□□□ -0.54
SNRNP48-201ENST00000342415 A0A0G2JPF8 293 aa11.66□□□□□ -0.54
SNRNP48-201ENST00000342415 ZAR1LA6NP61 321 aa11.66□□□□□ -0.54
SNRNP48-201ENST00000342415 HNRNPCL3B7ZW38 293 aa11.66□□□□□ -0.54
SNRNP48-201ENST00000342415 ARPC5O15511 151 aa11.66□□□□□ -0.54
SNRNP48-201ENST00000342415 TMPRSS11DO60235 418 aa11.66□□□□□ -0.54
SNRNP48-201ENST00000342415 ITGA10O75578 1167 aa11.66□□□□□ -0.54
SNRNP48-201ENST00000342415 HNRNPCL4P0DMR1 293 aa11.66□□□□□ -0.54
SNRNP48-201ENST00000342415 SKP1P63208 163 aa11.66□□□□□ -0.54
SNRNP48-201ENST00000342415 SHC2P98077 582 aa11.66□□□□□ -0.54
SNRNP48-201ENST00000342415 IRF5Q13568 498 aa11.66□□□□□ -0.54
SNRNP48-201ENST00000342415 EXOSC7Q15024 291 aaKnown RBP11.66□□□□□ -0.54
SNRNP48-201ENST00000342415 SLX4IPQ5VYV7 408 aa11.66□□□□□ -0.54
SNRNP48-201ENST00000342415 CASTOR1Q8WTX7 329 aa11.66□□□□□ -0.54
SNRNP48-201ENST00000342415 TMEM255BQ8WV15 326 aa11.66□□□□□ -0.54
SNRNP48-201ENST00000342415 ELMOD3Q96FG2 381 aa11.66□□□□□ -0.54
SNRNP48-201ENST00000342415 FOXN4Q96NZ1 517 aa11.66□□□□□ -0.54
SNRNP48-201ENST00000342415 GTPBP2Q9BX10 602 aaKnown RBP11.66□□□□□ -0.54
SNRNP48-201ENST00000342415 COMMD4Q9H0A8 199 aa11.66□□□□□ -0.54
SNRNP48-201ENST00000342415 OR51J1Q9H342 316 aa11.66□□□□□ -0.54
SNRNP48-201ENST00000342415 EXO5Q9H790 373 aa11.66□□□□□ -0.54
SNRNP48-201ENST00000342415 QPCTLQ9NXS2 382 aa11.66□□□□□ -0.54
SNRNP48-201ENST00000342415 PCDHGB1Q9Y5G3 927 aa11.66□□□□□ -0.54
SNRNP48-201ENST00000342415 PIKFYVEQ9Y2I7 2098 aa11.66□□□□□ -0.54
SNRNP48-201ENST00000342415 NRXN2Q9P2S2 1712 aa11.66□□□□□ -0.54
SNRNP48-201ENST00000342415 SCO1O75880 301 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms