RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 PRKAG1P54619 331 aa12.11□□□□□ -0.47
SIRPB3P-201ENST00000340424 C17orf67Q0P5P2 114 aa12.11□□□□□ -0.47
SIRPB3P-201ENST00000340424 STX3Q13277 289 aa12.11□□□□□ -0.47
SIRPB3P-201ENST00000340424 PDCD2Q16342 344 aaPredicted RBP12.11□□□□□ -0.47
SIRPB3P-201ENST00000340424 BCL2A1Q16548 175 aa12.11□□□□□ -0.47
SIRPB3P-201ENST00000340424 GLYR1Q49A26 553 aaPredicted RBP12.11□□□□□ -0.47
SIRPB3P-201ENST00000340424 BHLHB9Q6PI77 547 aa12.11□□□□□ -0.47
SIRPB3P-201ENST00000340424 MEX3BQ6ZN04 569 aaKnown RBP12.11□□□□□ -0.47
SIRPB3P-201ENST00000340424 SZRD1Q7Z422 152 aa12.11□□□□□ -0.47
SIRPB3P-201ENST00000340424 RIMKLAQ8IXN7 391 aa12.11□□□□□ -0.47
SIRPB3P-201ENST00000340424 OR7A2PQ8NGA2 310 aa12.11□□□□□ -0.47
SIRPB3P-201ENST00000340424 GOT1L1Q8NHS2 421 aaPredicted RBP12.11□□□□□ -0.47
SIRPB3P-201ENST00000340424 MBD3L2Q8NHZ7 208 aaPredicted RBP12.11□□□□□ -0.47
SIRPB3P-201ENST00000340424 RAB3IL1Q8TBN0 382 aa12.11□□□□□ -0.47
SIRPB3P-201ENST00000340424 SFXN5Q8TD22 340 aa12.11□□□□□ -0.47
SIRPB3P-201ENST00000340424 SLC9A6Q92581 669 aa12.11□□□□□ -0.47
SIRPB3P-201ENST00000340424 FAM120BQ96EK7 910 aaKnown RBP12.11□□□□□ -0.47
SIRPB3P-201ENST00000340424 RMND5BQ96G75 393 aaPredicted RBP12.11□□□□□ -0.47
SIRPB3P-201ENST00000340424 SFXN2Q96NB2 322 aa12.11□□□□□ -0.47
SIRPB3P-201ENST00000340424 UCN2Q96RP3 112 aa12.11□□□□□ -0.47
SIRPB3P-201ENST00000340424 UCK2Q9BZX2 261 aa12.11□□□□□ -0.47
SIRPB3P-201ENST00000340424 FAM107BQ9H098 131 aa12.11□□□□□ -0.47
SIRPB3P-201ENST00000340424 ZCCHC3Q9NUD5 404 aaKnown RBP12.11□□□□□ -0.47
SIRPB3P-201ENST00000340424 GIMAP2Q9UG22 337 aa12.11□□□□□ -0.47
SIRPB3P-201ENST00000340424 FBXL2Q9UKC9 423 aa12.11□□□□□ -0.47
SIRPB3P-201ENST00000340424 FREM3P0C091 2139 aa12.11□□□□□ -0.47
SIRPB3P-201ENST00000340424 PKDREJQ9NTG1 2253 aa12.11□□□□□ -0.47
SIRPB3P-201ENST00000340424 CSMD1Q96PZ7 3565 aa12.1□□□□□ -0.47
SIRPB3P-201ENST00000340424 H0Y3Z8 333 aa12.1□□□□□ -0.47
SIRPB3P-201ENST00000340424 SCO2O43819 266 aa12.1□□□□□ -0.47
SIRPB3P-201ENST00000340424 UTS2O95399 124 aa12.1□□□□□ -0.47
SIRPB3P-201ENST00000340424 IL18BPO95998 194 aa12.1□□□□□ -0.47
SIRPB3P-201ENST00000340424 G6PDP11413 515 aa12.1□□□□□ -0.47
SIRPB3P-201ENST00000340424 BGNP21810 368 aa12.1□□□□□ -0.47
SIRPB3P-201ENST00000340424 DIO3P55073 304 aa12.1□□□□□ -0.47
SIRPB3P-201ENST00000340424 CLDN8P56748 225 aa12.1□□□□□ -0.47
SIRPB3P-201ENST00000340424 EEF1A1P68104 462 aaKnown RBP12.1□□□□□ -0.47
SIRPB3P-201ENST00000340424 MPP2Q14168 576 aa12.1□□□□□ -0.47
SIRPB3P-201ENST00000340424 EXOSC6Q5RKV6 272 aaKnown RBP12.1□□□□□ -0.47
SIRPB3P-201ENST00000340424 DCST1Q5T197 706 aa12.1□□□□□ -0.47
SIRPB3P-201ENST00000340424 EEF1A1P5Q5VTE0 462 aa12.1□□□□□ -0.47
SIRPB3P-201ENST00000340424 CES4AQ5XG92 561 aa12.1□□□□□ -0.47
SIRPB3P-201ENST00000340424 SEM1Q6ZVN7 128 aa12.1□□□□□ -0.47
SIRPB3P-201ENST00000340424 WDR53Q7Z5U6 358 aaPredicted RBP12.1□□□□□ -0.47
SIRPB3P-201ENST00000340424 MISPQ8IVT2 679 aa12.1□□□□□ -0.47
SIRPB3P-201ENST00000340424 TRIM42Q8IWZ5 723 aa12.1□□□□□ -0.47
SIRPB3P-201ENST00000340424 DMRTC2Q8IXT2 367 aaPredicted RBP12.1□□□□□ -0.47
SIRPB3P-201ENST00000340424 COX18Q8N8Q8 333 aa12.1□□□□□ -0.47
SIRPB3P-201ENST00000340424 OR2M3Q8NG83 312 aa12.1□□□□□ -0.47
SIRPB3P-201ENST00000340424 FAM110BQ8TC76 370 aa12.1□□□□□ -0.47
SIRPB3P-201ENST00000340424 TRIB1Q96RU8 372 aa12.1□□□□□ -0.47
SIRPB3P-201ENST00000340424 SORT1Q99523 831 aa12.1□□□□□ -0.47
SIRPB3P-201ENST00000340424 TM9SF2Q99805 663 aa12.1□□□□□ -0.47
SIRPB3P-201ENST00000340424 DUSP26Q9BV47 211 aa12.1□□□□□ -0.47
SIRPB3P-201ENST00000340424 BTBD2Q9BX70 525 aa12.1□□□□□ -0.47
SIRPB3P-201ENST00000340424 AKTIPQ9H8T0 292 aa12.1□□□□□ -0.47
SIRPB3P-201ENST00000340424 SIRT3Q9NTG7 399 aaPredicted RBP12.1□□□□□ -0.47
SIRPB3P-201ENST00000340424 NKIRAS1Q9NYS0 192 aa12.1□□□□□ -0.47
SIRPB3P-201ENST00000340424 KCNN3Q9UGI6 736 aa12.1□□□□□ -0.47
SIRPB3P-201ENST00000340424 FOXD3Q9UJU5 478 aaPredicted RBP12.1□□□□□ -0.47
SIRPB3P-201ENST00000340424 SNX8Q9Y5X2 465 aa12.1□□□□□ -0.47
SIRPB3P-201ENST00000340424 ABCA12Q86UK0 2595 aa12.1□□□□□ -0.47
SIRPB3P-201ENST00000340424 FBN2P35556 2912 aa12.1□□□□□ -0.47
SIRPB3P-201ENST00000340424 GXYLT2A0PJZ3 443 aa12.09□□□□□ -0.47
SIRPB3P-201ENST00000340424 TMEM120BA0PK00 339 aa12.09□□□□□ -0.47
SIRPB3P-201ENST00000340424 ALG1L2C9J202 215 aa12.09□□□□□ -0.47
SIRPB3P-201ENST00000340424 ZIC3O60481 467 aa12.09□□□□□ -0.47
SIRPB3P-201ENST00000340424 KCNK2O95069 426 aa12.09□□□□□ -0.47
SIRPB3P-201ENST00000340424 ANGPTL1O95841 491 aa12.09□□□□□ -0.47
SIRPB3P-201ENST00000340424 HMGN2P05204 90 aaKnown RBP12.09□□□□□ -0.47
SIRPB3P-201ENST00000340424 SNRPB2P08579 225 aaKnown RBP12.09□□□□□ -0.47
SIRPB3P-201ENST00000340424 ACP2P11117 423 aa12.09□□□□□ -0.47
SIRPB3P-201ENST00000340424 PEPDP12955 493 aa12.09□□□□□ -0.47
SIRPB3P-201ENST00000340424 ZNF708P17019 499 aa12.09□□□□□ -0.47
SIRPB3P-201ENST00000340424 CAPN3P20807 821 aa12.09□□□□□ -0.47
SIRPB3P-201ENST00000340424 TBXA2RP21731 343 aa12.09□□□□□ -0.47
SIRPB3P-201ENST00000340424 OPRM1P35372 400 aa12.09□□□□□ -0.47
SIRPB3P-201ENST00000340424 RFX3P48380 749 aa12.09□□□□□ -0.47
SIRPB3P-201ENST00000340424 CCT3P49368 545 aaKnown RBP12.09□□□□□ -0.47
SIRPB3P-201ENST00000340424 LHX2P50458 406 aa12.09□□□□□ -0.47
SIRPB3P-201ENST00000340424 EEFSECP57772 596 aaKnown RBP12.09□□□□□ -0.47
SIRPB3P-201ENST00000340424 DUSP5Q16690 384 aa12.09□□□□□ -0.47
SIRPB3P-201ENST00000340424 DPY19L1Q2PZI1 675 aa12.09□□□□□ -0.47
SIRPB3P-201ENST00000340424 FBXL19-AS1Q494R0 122 aa12.09□□□□□ -0.47
SIRPB3P-201ENST00000340424 SPDYE7PQ495Y7 208 aa12.09□□□□□ -0.47
SIRPB3P-201ENST00000340424 ATG16L1Q676U5 607 aa12.09□□□□□ -0.47
SIRPB3P-201ENST00000340424 OR5M10Q6IEU7 315 aa12.09□□□□□ -0.47
SIRPB3P-201ENST00000340424 CDC73Q6P1J9 531 aa12.09□□□□□ -0.47
SIRPB3P-201ENST00000340424 ADGRE4PQ86SQ3 457 aa12.09□□□□□ -0.47
SIRPB3P-201ENST00000340424 KRTCAP2Q8N6L1 136 aa12.09□□□□□ -0.47
SIRPB3P-201ENST00000340424 SLC16A11Q8NCK7 471 aa12.09□□□□□ -0.47
SIRPB3P-201ENST00000340424 OR8J2Q8NGG1 315 aa12.09□□□□□ -0.47
SIRPB3P-201ENST00000340424 PIK3R3Q92569 461 aa12.09□□□□□ -0.47
SIRPB3P-201ENST00000340424 JADE3Q92613 823 aa12.09□□□□□ -0.47
SIRPB3P-201ENST00000340424 C1GALT1C1Q96EU7 318 aa12.09□□□□□ -0.47
SIRPB3P-201ENST00000340424 PAIP2Q9BPZ3 127 aaKnown RBP12.09□□□□□ -0.47
SIRPB3P-201ENST00000340424 PIGQQ9BRB3 760 aa12.09□□□□□ -0.47
SIRPB3P-201ENST00000340424 ACTRT3Q9BYD9 372 aa12.09□□□□□ -0.47
SIRPB3P-201ENST00000340424 C20orf27Q9GZN8 174 aa12.09□□□□□ -0.47
SIRPB3P-201ENST00000340424 HOXD1Q9GZZ0 328 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms