RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 H7C2Y5 167 aa8.8□□□□□ -1
NECAP1-201ENST00000339754 J3QRE1 110 aa8.8□□□□□ -1
NECAP1-201ENST00000339754 RP2O75695 350 aa8.8□□□□□ -1
NECAP1-201ENST00000339754 GATBO75879 557 aaKnown RBP8.8□□□□□ -1
NECAP1-201ENST00000339754 FGF18O76093 207 aa8.8□□□□□ -1
NECAP1-201ENST00000339754 UBXN7O94888 489 aa8.8□□□□□ -1
NECAP1-201ENST00000339754 MST1P26927 711 aa8.8□□□□□ -1
NECAP1-201ENST00000339754 RAD52P43351 418 aa8.8□□□□□ -1
NECAP1-201ENST00000339754 ARHGDIBP52566 201 aa8.8□□□□□ -1
NECAP1-201ENST00000339754 RAP2BP61225 183 aa8.8□□□□□ -1
NECAP1-201ENST00000339754 RHOAP61586 193 aa8.8□□□□□ -1
NECAP1-201ENST00000339754 SEC61A1P61619 476 aaKnown RBP8.8□□□□□ -1
NECAP1-201ENST00000339754 PITPNAQ00169 270 aa8.8□□□□□ -1
NECAP1-201ENST00000339754 PLD1Q13393 1074 aa8.8□□□□□ -1
NECAP1-201ENST00000339754 UBXN2BQ14CS0 331 aa8.8□□□□□ -1
NECAP1-201ENST00000339754 ZNF660Q6AZW8 331 aaPredicted RBP8.8□□□□□ -1
NECAP1-201ENST00000339754 KIAA1161Q6NSJ0 714 aa8.8□□□□□ -1
NECAP1-201ENST00000339754 C16orf59Q7L2K0 433 aa8.8□□□□□ -1
NECAP1-201ENST00000339754 COMMD6Q7Z4G1 85 aa8.8□□□□□ -1
NECAP1-201ENST00000339754 CBARPQ8N350 705 aaPredicted RBP8.8□□□□□ -1
NECAP1-201ENST00000339754 GNPDA2Q8TDQ7 276 aa8.8□□□□□ -1
NECAP1-201ENST00000339754 NSMAFQ92636 917 aa8.8□□□□□ -1
NECAP1-201ENST00000339754 RAB8BQ92930 207 aa8.8□□□□□ -1
NECAP1-201ENST00000339754 CLP1Q92989 425 aaKnown RBP8.8□□□□□ -1
NECAP1-201ENST00000339754 RGMAQ96B86 450 aa8.8□□□□□ -1
NECAP1-201ENST00000339754 YIPF4Q9BSR8 244 aa8.8□□□□□ -1
NECAP1-201ENST00000339754 GSDMCQ9BYG8 508 aa8.8□□□□□ -1
NECAP1-201ENST00000339754 SEMA4CQ9C0C4 833 aa8.8□□□□□ -1
NECAP1-201ENST00000339754 OR10A4Q9H209 315 aa8.8□□□□□ -1
NECAP1-201ENST00000339754 CTSFQ9UBX1 484 aa8.8□□□□□ -1
NECAP1-201ENST00000339754 CLEC4AQ9UMR7 237 aa8.8□□□□□ -1
NECAP1-201ENST00000339754 LRRN3E7EW58 273 aa8.8□□□□□ -1
NECAP1-201ENST00000339754 M0R3H8 397 aa8.8□□□□□ -1
NECAP1-201ENST00000339754 MID1O15344 667 aa8.8□□□□□ -1
NECAP1-201ENST00000339754 SIX6O95475 246 aa8.8□□□□□ -1
NECAP1-201ENST00000339754 HIST1H2ABP04908 130 aa8.8□□□□□ -1
NECAP1-201ENST00000339754 PPP3CBP16298 524 aa8.8□□□□□ -1
NECAP1-201ENST00000339754 PSMB1P20618 241 aaKnown RBP8.8□□□□□ -1
NECAP1-201ENST00000339754 TBXA2RP21731 343 aa8.8□□□□□ -1
NECAP1-201ENST00000339754 TAS2R50P59544 299 aa8.8□□□□□ -1
NECAP1-201ENST00000339754 DEFA5Q01523 94 aa8.8□□□□□ -1
NECAP1-201ENST00000339754 BDH1Q02338 343 aa8.8□□□□□ -1
NECAP1-201ENST00000339754 NAE1Q13564 534 aa8.8□□□□□ -1
NECAP1-201ENST00000339754 HFEQ30201 348 aa8.8□□□□□ -1
NECAP1-201ENST00000339754 FAM209BQ5JX69 171 aa8.8□□□□□ -1
NECAP1-201ENST00000339754 FAM180BQ6P0A1 224 aa8.8□□□□□ -1
NECAP1-201ENST00000339754 ZC3H14Q6PJT7 736 aaKnown RBP8.8□□□□□ -1
NECAP1-201ENST00000339754 ZNF600Q6ZNG1 722 aa8.8□□□□□ -1
NECAP1-201ENST00000339754 HIST3H2AQ7L7L0 130 aa8.8□□□□□ -1
NECAP1-201ENST00000339754 DNAJB7Q7Z6W7 309 aaPredicted RBP8.8□□□□□ -1
NECAP1-201ENST00000339754 TSPAN33Q86UF1 283 aa8.8□□□□□ -1
NECAP1-201ENST00000339754 TPRA1Q86W33 373 aa8.8□□□□□ -1
NECAP1-201ENST00000339754 CDH26Q8IXH8 852 aa8.8□□□□□ -1
NECAP1-201ENST00000339754 MMP21Q8N119 569 aa8.8□□□□□ -1
NECAP1-201ENST00000339754 OR4D9Q8NGE8 314 aa8.8□□□□□ -1
NECAP1-201ENST00000339754 OR6K2Q8NGY2 324 aa8.8□□□□□ -1
NECAP1-201ENST00000339754 TEX47Q8TBZ9 253 aa8.8□□□□□ -1
NECAP1-201ENST00000339754 HIST1H2ACQ93077 130 aa8.8□□□□□ -1
NECAP1-201ENST00000339754 FNDC11Q9BVV2 318 aa8.8□□□□□ -1
NECAP1-201ENST00000339754 JAM3Q9BX67 310 aa8.8□□□□□ -1
NECAP1-201ENST00000339754 NKX6-2Q9C056 277 aaPredicted RBP8.8□□□□□ -1
NECAP1-201ENST00000339754 SLC6A16Q9GZN6 736 aa8.8□□□□□ -1
NECAP1-201ENST00000339754 DNTTIP1Q9H147 329 aa8.8□□□□□ -1
NECAP1-201ENST00000339754 LRRN3Q9H3W5 708 aa8.8□□□□□ -1
NECAP1-201ENST00000339754 GPBP1L1Q9HC44 474 aaPredicted RBP8.8□□□□□ -1
NECAP1-201ENST00000339754 SLC6A20Q9NP91 592 aa8.8□□□□□ -1
NECAP1-201ENST00000339754 TEX10Q9NXF1 929 aaPredicted RBP8.8□□□□□ -1
NECAP1-201ENST00000339754 BABAM2Q9NXR7 383 aa8.8□□□□□ -1
NECAP1-201ENST00000339754 ERVK-19Q9WJR5 959 aa8.8□□□□□ -1
NECAP1-201ENST00000339754 ENTPD4Q9Y227 616 aa8.8□□□□□ -1
NECAP1-201ENST00000339754 HMSDA8MTL9 139 aa8.79□□□□□ -1
NECAP1-201ENST00000339754 LINC00587B1AMM8 73 aa8.79□□□□□ -1
NECAP1-201ENST00000339754 ANHXE9PGG2 379 aa8.79□□□□□ -1
NECAP1-201ENST00000339754 SAP18O00422 153 aaKnown RBP8.79□□□□□ -1
NECAP1-201ENST00000339754 GALR2O43603 387 aaPredicted RBP8.79□□□□□ -1
NECAP1-201ENST00000339754 B4GALT2O60909 372 aa8.79□□□□□ -1
NECAP1-201ENST00000339754 OAZ2O95190 189 aa8.79□□□□□ -1
NECAP1-201ENST00000339754 KLKB1P03952 638 aa8.79□□□□□ -1
NECAP1-201ENST00000339754 TYRP14679 529 aa8.79□□□□□ -1
NECAP1-201ENST00000339754 CPN1P15169 458 aa8.79□□□□□ -1
NECAP1-201ENST00000339754 IFNGR1P15260 489 aa8.79□□□□□ -1
NECAP1-201ENST00000339754 GJA1P17302 382 aa8.79□□□□□ -1
NECAP1-201ENST00000339754 GSTM3P21266 225 aa8.79□□□□□ -1
NECAP1-201ENST00000339754 GKP32189 559 aa8.79□□□□□ -1
NECAP1-201ENST00000339754 GDNFP39905 211 aa8.79□□□□□ -1
NECAP1-201ENST00000339754 MNX1P50219 401 aaPredicted RBP8.79□□□□□ -1
NECAP1-201ENST00000339754 CCR8P51685 355 aa8.79□□□□□ -1
NECAP1-201ENST00000339754 CCR9P51686 369 aa8.79□□□□□ -1
NECAP1-201ENST00000339754 PSMA6P60900 246 aaKnown RBP8.79□□□□□ -1
NECAP1-201ENST00000339754 GK2Q14410 553 aaPredicted RBP8.79□□□□□ -1
NECAP1-201ENST00000339754 MELKQ14680 651 aa8.79□□□□□ -1
NECAP1-201ENST00000339754 GLDNQ6ZMI3 551 aaPredicted RBP8.79□□□□□ -1
NECAP1-201ENST00000339754 ESPNLQ6ZVH7 1005 aa8.79□□□□□ -1
NECAP1-201ENST00000339754 SLC9B2Q86UD5 537 aa8.79□□□□□ -1
NECAP1-201ENST00000339754 APCDD1Q8J025 514 aa8.79□□□□□ -1
NECAP1-201ENST00000339754 LINC00471Q8N535 108 aa8.79□□□□□ -1
NECAP1-201ENST00000339754 TBC1D19Q8N5T2 526 aa8.79□□□□□ -1
NECAP1-201ENST00000339754 BBS1Q8NFJ9 593 aa8.79□□□□□ -1
NECAP1-201ENST00000339754 OR4D10Q8NGI6 311 aa8.79□□□□□ -1
NECAP1-201ENST00000339754 SOCS4Q8WXH5 440 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms