RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 MED18Q9BUE0 208 aa17.53■□□□□ 0.4
ITGA4-202ENST00000339307 GSX1Q9H4S2 264 aaPredicted RBP17.53■□□□□ 0.4
ITGA4-202ENST00000339307 RAB21Q9UL25 225 aa17.53■□□□□ 0.4
ITGA4-202ENST00000339307 VDAC3Q9Y277 283 aa17.53■□□□□ 0.4
ITGA4-202ENST00000339307 LINC01387J3KSC0 135 aa17.52■□□□□ 0.4
ITGA4-202ENST00000339307 AZIN1O14977 448 aa17.52■□□□□ 0.4
ITGA4-202ENST00000339307 TNFRSF21O75509 655 aa17.52■□□□□ 0.4
ITGA4-202ENST00000339307 PSMG1O95456 288 aa17.52■□□□□ 0.4
ITGA4-202ENST00000339307 LINC00032P0C843 101 aa17.52■□□□□ 0.4
ITGA4-202ENST00000339307 POU2F1P14859 743 aa17.52■□□□□ 0.4
ITGA4-202ENST00000339307 CLDN15P56746 228 aa17.52■□□□□ 0.4
ITGA4-202ENST00000339307 GRAMD1BQ3KR37 738 aa17.52■□□□□ 0.4
ITGA4-202ENST00000339307 GALNTL6Q49A17 601 aa17.52■□□□□ 0.4
ITGA4-202ENST00000339307 SH2D5Q6ZV89 423 aa17.52■□□□□ 0.4
ITGA4-202ENST00000339307 C10orf107Q8IVU9 208 aa17.52■□□□□ 0.4
ITGA4-202ENST00000339307 GATSQ8NAP1 163 aa17.52■□□□□ 0.4
ITGA4-202ENST00000339307 WFDC11Q8NEX6 87 aa17.52■□□□□ 0.4
ITGA4-202ENST00000339307 NUP43Q8NFH3 380 aa17.52■□□□□ 0.4
ITGA4-202ENST00000339307 FNDC9Q8TBE3 224 aa17.52■□□□□ 0.4
ITGA4-202ENST00000339307 CHMP6Q96FZ7 201 aa17.52■□□□□ 0.4
ITGA4-202ENST00000339307 ZC3HAV1LQ96H79 300 aaKnown RBP17.52■□□□□ 0.4
ITGA4-202ENST00000339307 WFIKKN1Q96NZ8 548 aa17.52■□□□□ 0.4
ITGA4-202ENST00000339307 PARD6BQ9BYG5 372 aa17.52■□□□□ 0.4
ITGA4-202ENST00000339307 ZNF226Q9NYT6 803 aa17.52■□□□□ 0.4
ITGA4-202ENST00000339307 BAIAP2L1Q9UHR4 511 aa17.52■□□□□ 0.4
ITGA4-202ENST00000339307 TLDC2A0PJX2 215 aa17.51■□□□□ 0.39
ITGA4-202ENST00000339307 IGKV1D-16P01601 117 aa17.51■□□□□ 0.39
ITGA4-202ENST00000339307 HPGDP15428 266 aa17.51■□□□□ 0.39
ITGA4-202ENST00000339307 CD79BP40259 229 aa17.51■□□□□ 0.39
ITGA4-202ENST00000339307 RPL38P63173 70 aaKnown RBP17.51■□□□□ 0.39
ITGA4-202ENST00000339307 KIAA0040Q15053 153 aa17.51■□□□□ 0.39
ITGA4-202ENST00000339307 FIGNL1Q6PIW4 674 aa17.51■□□□□ 0.39
ITGA4-202ENST00000339307 DDIASQ8IXT1 998 aa17.51■□□□□ 0.39
ITGA4-202ENST00000339307 CEP70Q8NHQ1 597 aa17.51■□□□□ 0.39
ITGA4-202ENST00000339307 JADE3Q92613 823 aa17.51■□□□□ 0.39
ITGA4-202ENST00000339307 ZBED6CLQ96FA7 236 aaPredicted RBP17.51■□□□□ 0.39
ITGA4-202ENST00000339307 PIK3IP1Q96FE7 263 aa17.51■□□□□ 0.39
ITGA4-202ENST00000339307 REEP4Q9H6H4 257 aa17.51■□□□□ 0.39
ITGA4-202ENST00000339307 STOML1Q9UBI4 398 aa17.51■□□□□ 0.39
ITGA4-202ENST00000339307 MID2Q9UJV3 735 aa17.51■□□□□ 0.39
ITGA4-202ENST00000339307 TESMINQ9Y4I5 508 aa17.51■□□□□ 0.39
ITGA4-202ENST00000339307 CCL27Q9Y4X3 112 aa17.51■□□□□ 0.39
ITGA4-202ENST00000339307 TTC36A6NLP5 189 aa17.5■□□□□ 0.39
ITGA4-202ENST00000339307 EIF1AYO14602 144 aaKnown RBP17.5■□□□□ 0.39
ITGA4-202ENST00000339307 NDUFB5O43674 189 aa17.5■□□□□ 0.39
ITGA4-202ENST00000339307 PLGP00747 810 aaPredicted RBP17.5■□□□□ 0.39
ITGA4-202ENST00000339307 OPN1LWP04000 364 aa17.5■□□□□ 0.39
ITGA4-202ENST00000339307 EFNA1P20827 205 aaPredicted RBP17.5■□□□□ 0.39
ITGA4-202ENST00000339307 KIR2DL2P43627 348 aaPredicted RBP17.5■□□□□ 0.39
ITGA4-202ENST00000339307 EIF1AXP47813 144 aaKnown RBP17.5■□□□□ 0.39
ITGA4-202ENST00000339307 EXOC3L2Q2M3D2 409 aa17.5■□□□□ 0.39
ITGA4-202ENST00000339307 ZNF474Q6S9Z5 364 aaPredicted RBP17.5■□□□□ 0.39
ITGA4-202ENST00000339307 APOOLQ6UXV4 268 aa17.5■□□□□ 0.39
ITGA4-202ENST00000339307 OR2T11Q8NH01 316 aa17.5■□□□□ 0.39
ITGA4-202ENST00000339307 OTUB1Q96FW1 271 aaPredicted RBP17.5■□□□□ 0.39
ITGA4-202ENST00000339307 METTL2AQ96IZ6 378 aaKnown RBP17.5■□□□□ 0.39
ITGA4-202ENST00000339307 KLHL4Q9C0H6 718 aa17.5■□□□□ 0.39
ITGA4-202ENST00000339307 PROCRQ9UNN8 238 aa17.5■□□□□ 0.39
ITGA4-202ENST00000339307 AP4B1Q9Y6B7 739 aa17.5■□□□□ 0.39
ITGA4-202ENST00000339307 HRNRQ86YZ3 2850 aaPredicted RBP17.49■□□□□ 0.39
ITGA4-202ENST00000339307 MTORP42345 2549 aa17.49■□□□□ 0.39
ITGA4-202ENST00000339307 A0A1W2PPR1 153 aa17.49■□□□□ 0.39
ITGA4-202ENST00000339307 SDC1P18827 310 aa17.49■□□□□ 0.39
ITGA4-202ENST00000339307 CD53P19397 219 aa17.49■□□□□ 0.39
ITGA4-202ENST00000339307 PRPH2P23942 346 aa17.49■□□□□ 0.39
ITGA4-202ENST00000339307 NKX6-1P78426 367 aaPredicted RBP17.49■□□□□ 0.39
ITGA4-202ENST00000339307 PRR5P85299 388 aa17.49■□□□□ 0.39
ITGA4-202ENST00000339307 GLYR1Q49A26 553 aaPredicted RBP17.49■□□□□ 0.39
ITGA4-202ENST00000339307 RFTN2Q52LD8 501 aaPredicted RBP17.49■□□□□ 0.39
ITGA4-202ENST00000339307 ZNF385BQ569K4 471 aa17.49■□□□□ 0.39
ITGA4-202ENST00000339307 ANKRD34AQ69YU3 496 aa17.49■□□□□ 0.39
ITGA4-202ENST00000339307 ZNF550Q7Z398 422 aa17.49■□□□□ 0.39
ITGA4-202ENST00000339307 CDRT4Q8N9R6 151 aa17.49■□□□□ 0.39
ITGA4-202ENST00000339307 ZNF610Q8N9Z0 462 aa17.49■□□□□ 0.39
ITGA4-202ENST00000339307 AENQ8WTP8 325 aaKnown RBP17.49■□□□□ 0.39
ITGA4-202ENST00000339307 CAVIN3Q969G5 261 aa17.49■□□□□ 0.39
ITGA4-202ENST00000339307 POM121Q96HA1 1249 aa17.49■□□□□ 0.39
ITGA4-202ENST00000339307 CCT7Q99832 543 aa17.49■□□□□ 0.39
ITGA4-202ENST00000339307 GATA5Q9BWX5 397 aaPredicted RBP17.49■□□□□ 0.39
ITGA4-202ENST00000339307 RNF122Q9H9V4 155 aa17.49■□□□□ 0.39
ITGA4-202ENST00000339307 PPCSQ9HAB8 311 aa17.49■□□□□ 0.39
ITGA4-202ENST00000339307 UBTD1Q9HAC8 227 aa17.49■□□□□ 0.39
ITGA4-202ENST00000339307 ELOVL5Q9NYP7 299 aa17.49■□□□□ 0.39
ITGA4-202ENST00000339307 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.49■□□□□ 0.39
ITGA4-202ENST00000339307 ZNF175Q9Y473 711 aa17.49■□□□□ 0.39
ITGA4-202ENST00000339307 V9GYY5 206 aaPredicted RBP17.49■□□□□ 0.39
ITGA4-202ENST00000339307 C16orf97H3BN30 126 aa17.48■□□□□ 0.39
ITGA4-202ENST00000339307 CTIFO43310 598 aaKnown RBP17.48■□□□□ 0.39
ITGA4-202ENST00000339307 EMC8O43402 210 aa17.48■□□□□ 0.39
ITGA4-202ENST00000339307 TRIM13O60858 407 aa17.48■□□□□ 0.39
ITGA4-202ENST00000339307 NEFHP12036 1026 aa17.48■□□□□ 0.39
ITGA4-202ENST00000339307 UGT2B10P36537 528 aa17.48■□□□□ 0.39
ITGA4-202ENST00000339307 FGFBP1Q14512 234 aa17.48■□□□□ 0.39
ITGA4-202ENST00000339307 Q6ZSR9 355 aa17.48■□□□□ 0.39
ITGA4-202ENST00000339307 TDRPQ86YL5 185 aa17.48■□□□□ 0.39
ITGA4-202ENST00000339307 P3H2Q8IVL5 708 aa17.48■□□□□ 0.39
ITGA4-202ENST00000339307 OR4C3Q8NH37 302 aa17.48■□□□□ 0.39
ITGA4-202ENST00000339307 AGR3Q8TD06 166 aa17.48■□□□□ 0.39
ITGA4-202ENST00000339307 SH3YL1Q96HL8 342 aaPredicted RBP17.48■□□□□ 0.39
ITGA4-202ENST00000339307 MS4A4EQ96PG1 132 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms