RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 SNX5Q9Y5X3 404 aa20.79■□□□□ 0.92
PDLIM2-203ENST00000339162 AK1P00568 194 aa20.78■□□□□ 0.92
PDLIM2-203ENST00000339162 CT45A8P0DMV1 189 aa20.78■□□□□ 0.92
PDLIM2-203ENST00000339162 CT45A9P0DMV2 189 aa20.78■□□□□ 0.92
PDLIM2-203ENST00000339162 FBLP22087 321 aaKnown RBP20.78■□□□□ 0.92
PDLIM2-203ENST00000339162 PLAURQ03405 335 aa20.78■□□□□ 0.92
PDLIM2-203ENST00000339162 ST3GAL3Q11203 375 aa20.78■□□□□ 0.92
PDLIM2-203ENST00000339162 DSG2Q14126 1118 aa20.78■□□□□ 0.92
PDLIM2-203ENST00000339162 CT45A2Q5DJT8 189 aa20.78■□□□□ 0.92
PDLIM2-203ENST00000339162 PDZK1Q5T2W1 519 aa20.78■□□□□ 0.92
PDLIM2-203ENST00000339162 ARHGAP40Q5TG30 622 aa20.78■□□□□ 0.92
PDLIM2-203ENST00000339162 GPR107Q5VW38 600 aa20.78■□□□□ 0.92
PDLIM2-203ENST00000339162 AHSA2Q719I0 299 aa20.78■□□□□ 0.92
PDLIM2-203ENST00000339162 PRICKLE2Q7Z3G6 844 aa20.78■□□□□ 0.92
PDLIM2-203ENST00000339162 GDF7Q7Z4P5 450 aa20.78■□□□□ 0.92
PDLIM2-203ENST00000339162 LAPTM4BQ86VI4 370 aa20.78■□□□□ 0.92
PDLIM2-203ENST00000339162 ZC3H10Q96K80 434 aaKnown RBP20.78■□□□□ 0.92
PDLIM2-203ENST00000339162 GTPBP2Q9BX10 602 aaKnown RBP20.78■□□□□ 0.92
PDLIM2-203ENST00000339162 DGCR6LQ9BY27 220 aa20.78■□□□□ 0.92
PDLIM2-203ENST00000339162 LHPPQ9H008 270 aa20.78■□□□□ 0.92
PDLIM2-203ENST00000339162 DUSP21Q9H596 190 aa20.78■□□□□ 0.92
PDLIM2-203ENST00000339162 CDHR4A6H8M9 788 aa20.78■□□□□ 0.92
PDLIM2-203ENST00000339162 TMEM221A6NGB7 291 aa20.78■□□□□ 0.92
PDLIM2-203ENST00000339162 M0R296 226 aa20.78■□□□□ 0.92
PDLIM2-203ENST00000339162 CLPSP04118 112 aa20.78■□□□□ 0.92
PDLIM2-203ENST00000339162 TP53P04637 393 aaPredicted RBP20.78■□□□□ 0.92
PDLIM2-203ENST00000339162 PNLIPP16233 465 aa20.78■□□□□ 0.92
PDLIM2-203ENST00000339162 SERTAD2Q14140 314 aa20.78■□□□□ 0.92
PDLIM2-203ENST00000339162 TRAM2Q15035 370 aa20.78■□□□□ 0.92
PDLIM2-203ENST00000339162 EIPR1Q53HC9 387 aa20.78■□□□□ 0.92
PDLIM2-203ENST00000339162 ZNF730Q6ZMV8 503 aa20.78■□□□□ 0.92
PDLIM2-203ENST00000339162 SHISA6Q6ZSJ9 500 aa20.78■□□□□ 0.92
PDLIM2-203ENST00000339162 ZNF615Q8N8J6 731 aa20.78■□□□□ 0.92
PDLIM2-203ENST00000339162 SLC41A3Q96GZ6 507 aa20.78■□□□□ 0.92
PDLIM2-203ENST00000339162 SENP5Q96HI0 755 aaPredicted RBP20.78■□□□□ 0.92
PDLIM2-203ENST00000339162 VCX3AQ9NNX9 186 aa20.78■□□□□ 0.92
PDLIM2-203ENST00000339162 CNIH4Q9P003 139 aa20.78■□□□□ 0.92
PDLIM2-203ENST00000339162 ENOPH1Q9UHY7 261 aa20.78■□□□□ 0.92
PDLIM2-203ENST00000339162 SLC7A7Q9UM01 511 aa20.78■□□□□ 0.92
PDLIM2-203ENST00000339162 A0A1B0GX78 115 aa20.77■□□□□ 0.92
PDLIM2-203ENST00000339162 GABRB1P18505 474 aa20.77■□□□□ 0.92
PDLIM2-203ENST00000339162 MAP2K4P45985 399 aa20.77■□□□□ 0.92
PDLIM2-203ENST00000339162 EMX1Q04741 257 aaPredicted RBP20.77■□□□□ 0.92
PDLIM2-203ENST00000339162 PEAR1Q5VY43 1037 aaPredicted RBP20.77■□□□□ 0.92
PDLIM2-203ENST00000339162 TMEM151BQ8IW70 566 aa20.77■□□□□ 0.92
PDLIM2-203ENST00000339162 IQCF1Q8N6M8 205 aa20.77■□□□□ 0.92
PDLIM2-203ENST00000339162 AMER2Q8N7J2 671 aa20.77■□□□□ 0.92
PDLIM2-203ENST00000339162 DTWD2Q8NBA8 298 aa20.77■□□□□ 0.92
PDLIM2-203ENST00000339162 TMEM255BQ8WV15 326 aa20.77■□□□□ 0.92
PDLIM2-203ENST00000339162 LMF1Q96S06 567 aa20.77■□□□□ 0.92
PDLIM2-203ENST00000339162 NAA50Q9GZZ1 169 aaKnown RBP20.77■□□□□ 0.92
PDLIM2-203ENST00000339162 ASCC3Q8N3C0 2202 aaKnown RBP20.77■□□□□ 0.92
PDLIM2-203ENST00000339162 DSCR3O14972 297 aa20.77■□□□□ 0.91
PDLIM2-203ENST00000339162 HTR2AP28223 471 aa20.77■□□□□ 0.91
PDLIM2-203ENST00000339162 PCSK6P29122 969 aa20.77■□□□□ 0.91
PDLIM2-203ENST00000339162 SLC5A2P31639 672 aa20.77■□□□□ 0.91
PDLIM2-203ENST00000339162 CDC42P60953 191 aa20.77■□□□□ 0.91
PDLIM2-203ENST00000339162 ILKQ13418 452 aa20.77■□□□□ 0.91
PDLIM2-203ENST00000339162 C1orf94Q6P1W5 598 aa20.77■□□□□ 0.91
PDLIM2-203ENST00000339162 DEPDC4Q8N2C3 294 aa20.77■□□□□ 0.91
PDLIM2-203ENST00000339162 FAM46AQ96IP4 442 aaKnown RBP20.77■□□□□ 0.91
PDLIM2-203ENST00000339162 OR1F2PQ96R84 312 aa20.77■□□□□ 0.91
PDLIM2-203ENST00000339162 OR6C1Q96RD1 312 aa20.77■□□□□ 0.91
PDLIM2-203ENST00000339162 IL4I1Q96RQ9 567 aa20.77■□□□□ 0.91
PDLIM2-203ENST00000339162 OR8D2Q9GZM6 311 aa20.77■□□□□ 0.91
PDLIM2-203ENST00000339162 ENAMQ9NRM1 1142 aa20.77■□□□□ 0.91
PDLIM2-203ENST00000339162 OR10H1Q9Y4A9 318 aa20.77■□□□□ 0.91
PDLIM2-203ENST00000339162 IGHV5-10-1A0A0J9YXX1 117 aa20.76■□□□□ 0.91
PDLIM2-203ENST00000339162 TIAF1O95411 115 aa20.76■□□□□ 0.91
PDLIM2-203ENST00000339162 PCMT1P22061 227 aa20.76■□□□□ 0.91
PDLIM2-203ENST00000339162 CALRP27797 417 aaKnown RBP20.76■□□□□ 0.91
PDLIM2-203ENST00000339162 SLC38A9Q8NBW4 561 aa20.76■□□□□ 0.91
PDLIM2-203ENST00000339162 RNF217Q8TC41 542 aa20.76■□□□□ 0.91
PDLIM2-203ENST00000339162 CNOT9Q92600 299 aaKnown RBP20.76■□□□□ 0.91
PDLIM2-203ENST00000339162 SLC7A5P2Q9GIP4 190 aa20.76■□□□□ 0.91
PDLIM2-203ENST00000339162 LRRN3Q9H3W5 708 aa20.76■□□□□ 0.91
PDLIM2-203ENST00000339162 Q9N2J8 555 aa20.76■□□□□ 0.91
PDLIM2-203ENST00000339162 CTSFQ9UBX1 484 aa20.76■□□□□ 0.91
PDLIM2-203ENST00000339162 PCDHGA10Q9Y5H3 936 aa20.76■□□□□ 0.91
PDLIM2-203ENST00000339162 FER1L5A0AVI2 2057 aa20.76■□□□□ 0.91
PDLIM2-203ENST00000339162 CFAP54Q96N23 3096 aa20.76■□□□□ 0.91
PDLIM2-203ENST00000339162 WDFY3Q8IZQ1 3526 aa20.76■□□□□ 0.91
PDLIM2-203ENST00000339162 ADAMTS20P59510 1910 aa20.76■□□□□ 0.91
PDLIM2-203ENST00000339162 INMTO95050 263 aa20.76■□□□□ 0.91
PDLIM2-203ENST00000339162 MT-ND2P03891 347 aa20.76■□□□□ 0.91
PDLIM2-203ENST00000339162 MSL3P1P0C860 447 aa20.76■□□□□ 0.91
PDLIM2-203ENST00000339162 IFNA8P32881 189 aa20.76■□□□□ 0.91
PDLIM2-203ENST00000339162 CCDC81Q6ZN84 652 aa20.76■□□□□ 0.91
PDLIM2-203ENST00000339162 PTCHD4Q6ZW05 846 aa20.76■□□□□ 0.91
PDLIM2-203ENST00000339162 RRM2BQ7LG56 351 aa20.76■□□□□ 0.91
PDLIM2-203ENST00000339162 FAM181AQ8N9Y4 354 aa20.76■□□□□ 0.91
PDLIM2-203ENST00000339162 PIP5K1CO60331 668 aa20.75■□□□□ 0.91
PDLIM2-203ENST00000339162 JUNBP17275 347 aaPredicted RBP20.75■□□□□ 0.91
PDLIM2-203ENST00000339162 MVKQ03426 396 aa20.75■□□□□ 0.91
PDLIM2-203ENST00000339162 RANBP3LQ86VV4 465 aaPredicted RBP20.75■□□□□ 0.91
PDLIM2-203ENST00000339162 GALNT15Q8N3T1 639 aa20.75■□□□□ 0.91
PDLIM2-203ENST00000339162 OR13F1Q8NGS4 319 aa20.75■□□□□ 0.91
PDLIM2-203ENST00000339162 ISOC1Q96CN7 298 aa20.75■□□□□ 0.91
PDLIM2-203ENST00000339162 DSN1Q9H410 356 aa20.75■□□□□ 0.91
PDLIM2-203ENST00000339162 EGLN3Q9H6Z9 239 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms