RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 TRIM77I1YAP6 450 aa17.57■□□□□ 0.4
PSPC1-201ENST00000338910 RAF1P04049 648 aa17.57■□□□□ 0.4
PSPC1-201ENST00000338910 TPOP07202 933 aa17.57■□□□□ 0.4
PSPC1-201ENST00000338910 H1F0P07305 194 aaKnown RBP17.57■□□□□ 0.4
PSPC1-201ENST00000338910 RAB28P51157 221 aa17.57■□□□□ 0.4
PSPC1-201ENST00000338910 DSTNP60981 165 aa17.57■□□□□ 0.4
PSPC1-201ENST00000338910 CSNK1G2P78368 415 aa17.57■□□□□ 0.4
PSPC1-201ENST00000338910 REEP5Q00765 189 aa17.57■□□□□ 0.4
PSPC1-201ENST00000338910 LRRC32Q14392 662 aa17.57■□□□□ 0.4
PSPC1-201ENST00000338910 ZNF57Q68EA5 555 aaPredicted RBP17.57■□□□□ 0.4
PSPC1-201ENST00000338910 SLC30A8Q8IWU4 369 aa17.57■□□□□ 0.4
PSPC1-201ENST00000338910 OR2A1Q8NGT9 310 aa17.57■□□□□ 0.4
PSPC1-201ENST00000338910 TM4SF18Q96CE8 201 aa17.57■□□□□ 0.4
PSPC1-201ENST00000338910 FUZQ9BT04 418 aa17.57■□□□□ 0.4
PSPC1-201ENST00000338910 POLHQ9Y253 713 aa17.57■□□□□ 0.4
PSPC1-201ENST00000338910 NCKAP1Q9Y2A7 1128 aa17.57■□□□□ 0.4
PSPC1-201ENST00000338910 CA5BQ9Y2D0 317 aa17.57■□□□□ 0.4
PSPC1-201ENST00000338910 IGKV1-8A0A0C4DH67 115 aa17.57■□□□□ 0.4
PSPC1-201ENST00000338910 GTPBP1O00178 669 aaKnown RBP17.57■□□□□ 0.4
PSPC1-201ENST00000338910 CACNB4O00305 520 aaPredicted RBP17.57■□□□□ 0.4
PSPC1-201ENST00000338910 PPM1DO15297 605 aa17.57■□□□□ 0.4
PSPC1-201ENST00000338910 APOL3O95236 402 aa17.57■□□□□ 0.4
PSPC1-201ENST00000338910 EFNB1P98172 346 aa17.57■□□□□ 0.4
PSPC1-201ENST00000338910 ALDH6A1Q02252 535 aaKnown RBP17.57■□□□□ 0.4
PSPC1-201ENST00000338910 PRDX1Q06830 199 aaKnown RBP17.57■□□□□ 0.4
PSPC1-201ENST00000338910 PLA1AQ53H76 456 aa17.57■□□□□ 0.4
PSPC1-201ENST00000338910 RPS26P11Q5JNZ5 115 aaPredicted RBP17.57■□□□□ 0.4
PSPC1-201ENST00000338910 TMEM65Q6PI78 240 aa17.57■□□□□ 0.4
PSPC1-201ENST00000338910 PHF21AQ96BD5 680 aa17.57■□□□□ 0.4
PSPC1-201ENST00000338910 PDXPQ96GD0 296 aa17.57■□□□□ 0.4
PSPC1-201ENST00000338910 MACROD1Q9BQ69 325 aa17.57■□□□□ 0.4
PSPC1-201ENST00000338910 FGF22Q9HCT0 170 aa17.57■□□□□ 0.4
PSPC1-201ENST00000338910 FGF20Q9NP95 211 aaPredicted RBP17.57■□□□□ 0.4
PSPC1-201ENST00000338910 MRPS18AQ9NVS2 196 aaKnown RBP17.57■□□□□ 0.4
PSPC1-201ENST00000338910 ASB4Q9Y574 426 aa17.57■□□□□ 0.4
PSPC1-201ENST00000338910 CIB4A0PJX0 185 aa17.56■□□□□ 0.4
PSPC1-201ENST00000338910 SHISA3A0PJX4 238 aa17.56■□□□□ 0.4
PSPC1-201ENST00000338910 AKAP8O43823 692 aaKnown RBP17.56■□□□□ 0.4
PSPC1-201ENST00000338910 NCR1O76036 304 aa17.56■□□□□ 0.4
PSPC1-201ENST00000338910 DRD1P21728 446 aa17.56■□□□□ 0.4
PSPC1-201ENST00000338910 GPR176Q14439 515 aa17.56■□□□□ 0.4
PSPC1-201ENST00000338910 COL19A1Q14993 1142 aa17.56■□□□□ 0.4
PSPC1-201ENST00000338910 IKBIPQ70UQ0 350 aa17.56■□□□□ 0.4
PSPC1-201ENST00000338910 OR52E1Q8NGJ3 308 aa17.56■□□□□ 0.4
PSPC1-201ENST00000338910 RPLP0P6Q8NHW5 317 aa17.56■□□□□ 0.4
PSPC1-201ENST00000338910 SLC7A13Q8TCU3 470 aa17.56■□□□□ 0.4
PSPC1-201ENST00000338910 MRGPRX1Q96LB2 322 aa17.56■□□□□ 0.4
PSPC1-201ENST00000338910 TEFMQ96QE5 360 aaKnown RBP17.56■□□□□ 0.4
PSPC1-201ENST00000338910 MED28Q9H204 178 aa17.56■□□□□ 0.4
PSPC1-201ENST00000338910 RANBP3Q9H6Z4 567 aaPredicted RBP17.56■□□□□ 0.4
PSPC1-201ENST00000338910 LHX9Q9NQ69 397 aa17.56■□□□□ 0.4
PSPC1-201ENST00000338910 PLXND1Q9Y4D7 1925 aa17.56■□□□□ 0.4
PSPC1-201ENST00000338910 TPPPO94811 219 aa17.56■□□□□ 0.4
PSPC1-201ENST00000338910 DDCP20711 480 aa17.56■□□□□ 0.4
PSPC1-201ENST00000338910 UAP1L1Q3KQV9 507 aa17.56■□□□□ 0.4
PSPC1-201ENST00000338910 TMEM31Q5JXX7 168 aa17.56■□□□□ 0.4
PSPC1-201ENST00000338910 TMEM92Q6UXU6 159 aa17.56■□□□□ 0.4
PSPC1-201ENST00000338910 CHRDL2Q6WN34 429 aa17.56■□□□□ 0.4
PSPC1-201ENST00000338910 RD3Q7Z3Z2 195 aa17.56■□□□□ 0.4
PSPC1-201ENST00000338910 ARIH2OSQ8N7S6 290 aa17.56■□□□□ 0.4
PSPC1-201ENST00000338910 AMER3Q8N944 861 aa17.56■□□□□ 0.4
PSPC1-201ENST00000338910 OR11H4Q8NGC9 324 aa17.56■□□□□ 0.4
PSPC1-201ENST00000338910 B3GNT4Q9C0J1 378 aa17.56■□□□□ 0.4
PSPC1-201ENST00000338910 FBRSQ9HAH7 460 aa17.56■□□□□ 0.4
PSPC1-201ENST00000338910 COQ3Q9NZJ6 369 aa17.56■□□□□ 0.4
PSPC1-201ENST00000338910 RPS10-NUDT3A0A1W2PQS6 291 aa17.55■□□□□ 0.4
PSPC1-201ENST00000338910 SNTNA6NMZ2 147 aa17.55■□□□□ 0.4
PSPC1-201ENST00000338910 H0Y8X5 98 aa17.55■□□□□ 0.4
PSPC1-201ENST00000338910 TMPRSS11DO60235 418 aa17.55■□□□□ 0.4
PSPC1-201ENST00000338910 ASGR2P07307 311 aa17.55■□□□□ 0.4
PSPC1-201ENST00000338910 GAAP10253 952 aa17.55■□□□□ 0.4
PSPC1-201ENST00000338910 ATP12AP54707 1039 aa17.55■□□□□ 0.4
PSPC1-201ENST00000338910 RAB40BQ12829 278 aa17.55■□□□□ 0.4
PSPC1-201ENST00000338910 DSG2Q14126 1118 aa17.55■□□□□ 0.4
PSPC1-201ENST00000338910 ACSM5Q6NUN0 579 aa17.55■□□□□ 0.4
PSPC1-201ENST00000338910 RBM45Q8IUH3 476 aaKnown RBP17.55■□□□□ 0.4
PSPC1-201ENST00000338910 LRRC17Q8N6Y2 441 aa17.55■□□□□ 0.4
PSPC1-201ENST00000338910 ZFP41Q8N8Y5 198 aa17.55■□□□□ 0.4
PSPC1-201ENST00000338910 ZNF485Q8NCK3 441 aa17.55■□□□□ 0.4
PSPC1-201ENST00000338910 ARHGAP9Q9BRR9 750 aa17.55■□□□□ 0.4
PSPC1-201ENST00000338910 EMC7Q9NPA0 242 aa17.55■□□□□ 0.4
PSPC1-201ENST00000338910 SLAMF7Q9NQ25 335 aa17.55■□□□□ 0.4
PSPC1-201ENST00000338910 SEMA3GQ9NS98 782 aa17.55■□□□□ 0.4
PSPC1-201ENST00000338910 EVA1BQ9NVM1 165 aa17.55■□□□□ 0.4
PSPC1-201ENST00000338910 HEATR5BQ9P2D3 2071 aa17.55■□□□□ 0.4
PSPC1-201ENST00000338910 C7orf66A4D0T2 115 aa17.55■□□□□ 0.4
PSPC1-201ENST00000338910 LIMS3P0CW19 117 aa17.55■□□□□ 0.4
PSPC1-201ENST00000338910 LIMS4P0CW20 117 aa17.55■□□□□ 0.4
PSPC1-201ENST00000338910 ACP2P11117 423 aa17.55■□□□□ 0.4
PSPC1-201ENST00000338910 GIPRP48546 466 aa17.55■□□□□ 0.4
PSPC1-201ENST00000338910 GINS1Q14691 196 aa17.55■□□□□ 0.4
PSPC1-201ENST00000338910 TYW3Q6IPR3 259 aaKnown RBP17.55■□□□□ 0.4
PSPC1-201ENST00000338910 MZT2AQ6P582 158 aa17.55■□□□□ 0.4
PSPC1-201ENST00000338910 KIAA1324Q6UXG2 1013 aaKnown RBP17.55■□□□□ 0.4
PSPC1-201ENST00000338910 UBE3DQ7Z6J8 389 aa17.55■□□□□ 0.4
PSPC1-201ENST00000338910 OR11H7Q8NGC8 314 aa17.55■□□□□ 0.4
PSPC1-201ENST00000338910 RGMAQ96B86 450 aa17.55■□□□□ 0.4
PSPC1-201ENST00000338910 SORCS2Q96PQ0 1159 aa17.55■□□□□ 0.4
PSPC1-201ENST00000338910 PRR14Q9BWN1 585 aa17.55■□□□□ 0.4
PSPC1-201ENST00000338910 CXorf36Q9H7Y0 433 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms