RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best) BASIC

Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 MVKQ03426 396 aa15.07■□□□□ 0
HPS1-202ENST00000338546 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.07■□□□□ 0
HPS1-202ENST00000338546 CT45A2Q5DJT8 189 aa15.07■□□□□ 0
HPS1-202ENST00000338546 TRIM61Q5EBN2 209 aa15.07■□□□□ 0
HPS1-202ENST00000338546 MRPL2Q5T653 305 aaKnown RBP15.07■□□□□ 0
HPS1-202ENST00000338546 SLX4IPQ5VYV7 408 aa15.07■□□□□ 0
HPS1-202ENST00000338546 RRM2BQ7LG56 351 aa15.07■□□□□ 0
HPS1-202ENST00000338546 RNF113BQ8IZP6 322 aaKnown RBP15.07■□□□□ 0
HPS1-202ENST00000338546 PLPP5Q8NEB5 264 aa15.07■□□□□ 0
HPS1-202ENST00000338546 PTPMT1Q8WUK0 201 aaPredicted RBP15.07■□□□□ 0
HPS1-202ENST00000338546 APH1BQ8WW43 257 aa15.07■□□□□ 0
HPS1-202ENST00000338546 SLC41A3Q96GZ6 507 aa15.07■□□□□ 0
HPS1-202ENST00000338546 SENP5Q96HI0 755 aaPredicted RBP15.07■□□□□ 0
HPS1-202ENST00000338546 HOXD1Q9GZZ0 328 aa15.07■□□□□ 0
HPS1-202ENST00000338546 SEMA4GQ9NTN9 838 aa15.07■□□□□ 0
HPS1-202ENST00000338546 RSL24D1Q9UHA3 163 aaKnown RBP15.07■□□□□ 0
HPS1-202ENST00000338546 KCNE5Q9UJ90 142 aa15.07■□□□□ 0
HPS1-202ENST00000338546 IGLV3-12A0A075B6K2 115 aa15.06■□□□□ 0
HPS1-202ENST00000338546 IGHV5-10-1A0A0J9YXX1 117 aa15.06■□□□□ 0
HPS1-202ENST00000338546 TRAPPC13A5PLN9 417 aa15.06■□□□□ 0
HPS1-202ENST00000338546 CPSF4LA6NMK7 179 aaKnown RBP15.06■□□□□ 0
HPS1-202ENST00000338546 NPIPB9F8W1W9 429 aa15.06■□□□□ 0
HPS1-202ENST00000338546 H3BSA7 217 aa15.06■□□□□ 0
HPS1-202ENST00000338546 CLPSP04118 112 aa15.06■□□□□ 0
HPS1-202ENST00000338546 ZNF883P0CG24 379 aa15.06■□□□□ 0
HPS1-202ENST00000338546 MMP11P24347 488 aa15.06■□□□□ 0
HPS1-202ENST00000338546 FMO3P31513 532 aa15.06■□□□□ 0
HPS1-202ENST00000338546 PPICP45877 212 aa15.06■□□□□ 0
HPS1-202ENST00000338546 IDH2P48735 452 aaKnown RBP15.06■□□□□ 0
HPS1-202ENST00000338546 SNRPGP62308 76 aaKnown RBP15.06■□□□□ 0
HPS1-202ENST00000338546 PSPHP78330 225 aa15.06■□□□□ 0
HPS1-202ENST00000338546 TSPAN31Q12999 210 aa15.06■□□□□ 0
HPS1-202ENST00000338546 PMS2P3Q13401 168 aa15.06■□□□□ 0
HPS1-202ENST00000338546 ARHGAP40Q5TG30 622 aa15.06■□□□□ 0
HPS1-202ENST00000338546 NPSR1Q6W5P4 371 aa15.06■□□□□ 0
HPS1-202ENST00000338546 PRSS48Q7RTY5 328 aa15.06■□□□□ 0
HPS1-202ENST00000338546 GDF7Q7Z4P5 450 aa15.06■□□□□ 0
HPS1-202ENST00000338546 TMEM151BQ8IW70 566 aa15.06■□□□□ 0
HPS1-202ENST00000338546 SVOPQ8N4V2 548 aa15.06■□□□□ 0
HPS1-202ENST00000338546 RCBTB1Q8NDN9 531 aa15.06■□□□□ 0
HPS1-202ENST00000338546 OR14A16Q8NHC5 309 aa15.06■□□□□ 0
HPS1-202ENST00000338546 PIGXQ8TBF5 258 aa15.06■□□□□ 0
HPS1-202ENST00000338546 DAZLQ92904 295 aaKnown RBP15.06■□□□□ 0
HPS1-202ENST00000338546 TMIGD2Q96BF3 282 aa15.06■□□□□ 0
HPS1-202ENST00000338546 LOXL4Q96JB6 756 aa15.06■□□□□ 0
HPS1-202ENST00000338546 Q96MT0 163 aa15.06■□□□□ 0
HPS1-202ENST00000338546 NECAB3Q96P71 396 aaPredicted RBP15.06■□□□□ 0
HPS1-202ENST00000338546 TSC22D3Q99576 134 aa15.06■□□□□ 0
HPS1-202ENST00000338546 ZNF559Q9BR84 538 aa15.06■□□□□ 0
HPS1-202ENST00000338546 YIPF3Q9GZM5 350 aa15.06■□□□□ 0
HPS1-202ENST00000338546 FBXO34Q9NWN3 711 aa15.06■□□□□ 0
HPS1-202ENST00000338546 ZNF226Q9NYT6 803 aa15.06■□□□□ 0
HPS1-202ENST00000338546 ATXN7L1Q9ULK2 861 aaPredicted RBP15.06■□□□□ 0
HPS1-202ENST00000338546 CBLCQ9ULV8 474 aa15.06■□□□□ 0
HPS1-202ENST00000338546 CCDC160A6NGH7 325 aa15.05■□□□□ -0
HPS1-202ENST00000338546 PTGES3LE9PB15 166 aa15.05■□□□□ -0
HPS1-202ENST00000338546 HRKO00198 91 aa15.05■□□□□ -0
HPS1-202ENST00000338546 PEX12O00623 359 aa15.05■□□□□ -0
HPS1-202ENST00000338546 POLR1CO15160 346 aaPredicted RBP15.05■□□□□ -0
HPS1-202ENST00000338546 FRS3O43559 492 aa15.05■□□□□ -0
HPS1-202ENST00000338546 RGS10O43665 173 aa15.05■□□□□ -0
HPS1-202ENST00000338546 FAM20BO75063 409 aa15.05■□□□□ -0
HPS1-202ENST00000338546 SEC14L2O76054 403 aa15.05■□□□□ -0
HPS1-202ENST00000338546 HTR1AP08908 422 aa15.05■□□□□ -0
HPS1-202ENST00000338546 KRT20P35900 424 aa15.05■□□□□ -0
HPS1-202ENST00000338546 GSSP48637 474 aa15.05■□□□□ -0
HPS1-202ENST00000338546 PGDP52209 483 aa15.05■□□□□ -0
HPS1-202ENST00000338546 ATP12AP54707 1039 aa15.05■□□□□ -0
HPS1-202ENST00000338546 TRA2AQ13595 282 aaKnown RBP eCLIP15.05■□□□□ -0
HPS1-202ENST00000338546 RAB39AQ14964 217 aa15.05■□□□□ -0
HPS1-202ENST00000338546 C12orf73Q69YU5 71 aa15.05■□□□□ -0
HPS1-202ENST00000338546 XAF1Q6GPH4 301 aa15.05■□□□□ -0
HPS1-202ENST00000338546 ZNF613Q6PF04 617 aa15.05■□□□□ -0
HPS1-202ENST00000338546 ZNF730Q6ZMV8 503 aa15.05■□□□□ -0
HPS1-202ENST00000338546 Q6ZPB1 254 aaPredicted RBP15.05■□□□□ -0
HPS1-202ENST00000338546 MBOAT2Q6ZWT7 520 aa15.05■□□□□ -0
HPS1-202ENST00000338546 TMPRSS9Q7Z410 1059 aa15.05■□□□□ -0
HPS1-202ENST00000338546 SLITRK4Q8IW52 837 aa15.05■□□□□ -0
HPS1-202ENST00000338546 ZNF540Q8NDQ6 660 aa15.05■□□□□ -0
HPS1-202ENST00000338546 OR13F1Q8NGS4 319 aa15.05■□□□□ -0
HPS1-202ENST00000338546 IFI44Q8TCB0 444 aa15.05■□□□□ -0
HPS1-202ENST00000338546 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.05■□□□□ -0
HPS1-202ENST00000338546 RASSF1Q9NS23 344 aa15.05■□□□□ -0
HPS1-202ENST00000338546 PTTG2Q9NZH5 202 aa15.05■□□□□ -0
HPS1-202ENST00000338546 MRTO4Q9UKD2 239 aaKnown RBP15.05■□□□□ -0
HPS1-202ENST00000338546 RARRES3Q9UL19 164 aa15.05■□□□□ -0
HPS1-202ENST00000338546 CLCA3PQ9Y6N3 262 aa15.05■□□□□ -0
HPS1-202ENST00000338546 XPNPEP2O43895 674 aa15.04■□□□□ -0
HPS1-202ENST00000338546 IGKV3-11P04433 115 aa15.04■□□□□ -0
HPS1-202ENST00000338546 TP53P04637 393 aaPredicted RBP15.04■□□□□ -0
HPS1-202ENST00000338546 FPR3P25089 353 aa15.04■□□□□ -0
HPS1-202ENST00000338546 GSTT1P30711 240 aa15.04■□□□□ -0
HPS1-202ENST00000338546 STAT5AP42229 794 aa15.04■□□□□ -0
HPS1-202ENST00000338546 SLC37A1P57057 533 aa15.04■□□□□ -0
HPS1-202ENST00000338546 DAB2P98082 770 aa15.04■□□□□ -0
HPS1-202ENST00000338546 COL9A2Q14055 689 aaPredicted RBP15.04■□□□□ -0
HPS1-202ENST00000338546 FGFBP1Q14512 234 aa15.04■□□□□ -0
HPS1-202ENST00000338546 MINDY4Q4G0A6 757 aa15.04■□□□□ -0
HPS1-202ENST00000338546 SLC25A30Q5SVS4 291 aa15.04■□□□□ -0
HPS1-202ENST00000338546 B3GNT6Q6ZMB0 384 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms