RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 SFXN3Q9BWM7 321 aa12.05□□□□□ -0.48
NUDCD3-201ENST00000338427 PINK1Q9BXM7 581 aa12.05□□□□□ -0.48
NUDCD3-201ENST00000338427 ZNF395Q9H8N7 513 aaPredicted RBP12.05□□□□□ -0.48
NUDCD3-201ENST00000338427 PLEKHF2Q9H8W4 249 aa12.05□□□□□ -0.48
NUDCD3-201ENST00000338427 SDHAF3Q9NRP4 125 aa12.05□□□□□ -0.48
NUDCD3-201ENST00000338427 FAM120CQ9NX05 1096 aaKnown RBP12.05□□□□□ -0.48
NUDCD3-201ENST00000338427 ZDHHC2Q9UIJ5 367 aa12.05□□□□□ -0.48
NUDCD3-201ENST00000338427 VDAC3Q9Y277 283 aa12.05□□□□□ -0.48
NUDCD3-201ENST00000338427 KCNE3Q9Y6H6 103 aa12.05□□□□□ -0.48
NUDCD3-201ENST00000338427 SETD2Q9BYW2 2564 aaPredicted RBP12.05□□□□□ -0.48
NUDCD3-201ENST00000338427 H3BQF6 201 aa12.04□□□□□ -0.48
NUDCD3-201ENST00000338427 KCNK2O95069 426 aa12.04□□□□□ -0.48
NUDCD3-201ENST00000338427 HRGP04196 525 aa12.04□□□□□ -0.48
NUDCD3-201ENST00000338427 LAMP1P11279 417 aa12.04□□□□□ -0.48
NUDCD3-201ENST00000338427 CD99P14209 185 aa12.04□□□□□ -0.48
NUDCD3-201ENST00000338427 DNASE1P24855 282 aa12.04□□□□□ -0.48
NUDCD3-201ENST00000338427 SLC6A8P48029 635 aa12.04□□□□□ -0.48
NUDCD3-201ENST00000338427 NAA20P61599 178 aa12.04□□□□□ -0.48
NUDCD3-201ENST00000338427 ZNHIT3Q15649 155 aaPredicted RBP12.04□□□□□ -0.48
NUDCD3-201ENST00000338427 DUSP5Q16690 384 aa12.04□□□□□ -0.48
NUDCD3-201ENST00000338427 ANKRD34AQ69YU3 496 aa12.04□□□□□ -0.48
NUDCD3-201ENST00000338427 IKBIPQ70UQ0 350 aa12.04□□□□□ -0.48
NUDCD3-201ENST00000338427 ZNF610Q8N9Z0 462 aa12.04□□□□□ -0.48
NUDCD3-201ENST00000338427 FNDC9Q8TBE3 224 aa12.04□□□□□ -0.48
NUDCD3-201ENST00000338427 FAM110BQ8TC76 370 aa12.04□□□□□ -0.48
NUDCD3-201ENST00000338427 TWIST2Q8WVJ9 160 aa12.04□□□□□ -0.48
NUDCD3-201ENST00000338427 PGM2Q96G03 612 aa12.04□□□□□ -0.48
NUDCD3-201ENST00000338427 FOXC2Q99958 501 aa12.04□□□□□ -0.48
NUDCD3-201ENST00000338427 C1orf50Q9BV19 199 aa12.04□□□□□ -0.48
NUDCD3-201ENST00000338427 TBL1XR1Q9BZK7 514 aa12.04□□□□□ -0.48
NUDCD3-201ENST00000338427 CXXC4Q9H2H0 198 aa12.04□□□□□ -0.48
NUDCD3-201ENST00000338427 GSX1Q9H4S2 264 aaPredicted RBP12.04□□□□□ -0.48
NUDCD3-201ENST00000338427 SIRT3Q9NTG7 399 aaPredicted RBP12.04□□□□□ -0.48
NUDCD3-201ENST00000338427 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.04□□□□□ -0.48
NUDCD3-201ENST00000338427 CLEC4AQ9UMR7 237 aa12.04□□□□□ -0.48
NUDCD3-201ENST00000338427 V9GYY5 206 aaPredicted RBP12.04□□□□□ -0.48
NUDCD3-201ENST00000338427 ANKHD1Q8IWZ3 2542 aaKnown RBP12.03□□□□□ -0.48
NUDCD3-201ENST00000338427 NPIPA5A0A0B4J1W7 369 aa12.03□□□□□ -0.48
NUDCD3-201ENST00000338427 SH3D21A4FU49 640 aa12.03□□□□□ -0.48
NUDCD3-201ENST00000338427 SLC22A20A6NK97 555 aa12.03□□□□□ -0.48
NUDCD3-201ENST00000338427 NPIPA7E9PJI5 369 aa12.03□□□□□ -0.48
NUDCD3-201ENST00000338427 SIAH2O43255 324 aa12.03□□□□□ -0.48
NUDCD3-201ENST00000338427 EMC8O43402 210 aa12.03□□□□□ -0.48
NUDCD3-201ENST00000338427 OIP5O43482 229 aa12.03□□□□□ -0.48
NUDCD3-201ENST00000338427 TBX19O60806 448 aa12.03□□□□□ -0.48
NUDCD3-201ENST00000338427 AQP8O94778 261 aa12.03□□□□□ -0.48
NUDCD3-201ENST00000338427 OXSR1O95747 527 aaPredicted RBP12.03□□□□□ -0.48
NUDCD3-201ENST00000338427 NPIPA8P0DM63 369 aa12.03□□□□□ -0.48
NUDCD3-201ENST00000338427 CPOXP36551 454 aa12.03□□□□□ -0.48
NUDCD3-201ENST00000338427 FRKP42685 505 aaPredicted RBP12.03□□□□□ -0.48
NUDCD3-201ENST00000338427 PRR5P85299 388 aa12.03□□□□□ -0.48
NUDCD3-201ENST00000338427 C17orf67Q0P5P2 114 aa12.03□□□□□ -0.48
NUDCD3-201ENST00000338427 PDE7AQ13946 482 aa12.03□□□□□ -0.48
NUDCD3-201ENST00000338427 TMEM44Q2T9K0 475 aa12.03□□□□□ -0.48
NUDCD3-201ENST00000338427 MEIOBQ8N635 442 aa12.03□□□□□ -0.48
NUDCD3-201ENST00000338427 KRTCAP2Q8N6L1 136 aa12.03□□□□□ -0.48
NUDCD3-201ENST00000338427 CEP70Q8NHQ1 597 aa12.03□□□□□ -0.48
NUDCD3-201ENST00000338427 HOXB13Q92826 284 aaPredicted RBP12.03□□□□□ -0.48
NUDCD3-201ENST00000338427 SH3YL1Q96HL8 342 aaPredicted RBP12.03□□□□□ -0.48
NUDCD3-201ENST00000338427 APOPT1Q96IL0 206 aa12.03□□□□□ -0.48
NUDCD3-201ENST00000338427 METTL2AQ96IZ6 378 aaKnown RBP12.03□□□□□ -0.48
NUDCD3-201ENST00000338427 CCT7Q99832 543 aa12.03□□□□□ -0.48
NUDCD3-201ENST00000338427 GIN1Q9NXP7 522 aa12.03□□□□□ -0.48
NUDCD3-201ENST00000338427 KLHL28Q9NXS3 571 aa12.03□□□□□ -0.48
NUDCD3-201ENST00000338427 C6orf203Q9P0P8 240 aaPredicted RBP12.03□□□□□ -0.48
NUDCD3-201ENST00000338427 NTMQ9P121 344 aa12.03□□□□□ -0.48
NUDCD3-201ENST00000338427 PACSIN3Q9UKS6 424 aa12.03□□□□□ -0.48
NUDCD3-201ENST00000338427 WDR91A4D1P6 747 aa12.02□□□□□ -0.49
NUDCD3-201ENST00000338427 ITM2AO43736 263 aa12.02□□□□□ -0.49
NUDCD3-201ENST00000338427 NPHS1O60500 1241 aa12.02□□□□□ -0.49
NUDCD3-201ENST00000338427 TNFRSF21O75509 655 aa12.02□□□□□ -0.49
NUDCD3-201ENST00000338427 LYPLA1O75608 230 aaPredicted RBP12.02□□□□□ -0.49
NUDCD3-201ENST00000338427 SLITRK5O94991 958 aa12.02□□□□□ -0.49
NUDCD3-201ENST00000338427 KCNH1O95259 989 aa12.02□□□□□ -0.49
NUDCD3-201ENST00000338427 ATE1O95260 518 aa12.02□□□□□ -0.49
NUDCD3-201ENST00000338427 CGAP01215 116 aa12.02□□□□□ -0.49
NUDCD3-201ENST00000338427 KLK2P20151 261 aa12.02□□□□□ -0.49
NUDCD3-201ENST00000338427 IL11P20809 199 aa12.02□□□□□ -0.49
NUDCD3-201ENST00000338427 PEX19P40855 299 aa12.02□□□□□ -0.49
NUDCD3-201ENST00000338427 CLK3P49761 638 aaKnown RBP12.02□□□□□ -0.49
NUDCD3-201ENST00000338427 SORDQ00796 357 aa12.02□□□□□ -0.49
NUDCD3-201ENST00000338427 PTGR1Q14914 329 aa12.02□□□□□ -0.49
NUDCD3-201ENST00000338427 PON3Q15166 354 aa12.02□□□□□ -0.49
NUDCD3-201ENST00000338427 C6orf136Q5SQH8 315 aa12.02□□□□□ -0.49
NUDCD3-201ENST00000338427 IL23RQ5VWK5 629 aa12.02□□□□□ -0.49
NUDCD3-201ENST00000338427 PPP4R4Q6NUP7 873 aa12.02□□□□□ -0.49
NUDCD3-201ENST00000338427 MFSD12Q6NUT3 480 aa12.02□□□□□ -0.49
NUDCD3-201ENST00000338427 OLIG3Q7RTU3 272 aa12.02□□□□□ -0.49
NUDCD3-201ENST00000338427 ZNF550Q7Z398 422 aa12.02□□□□□ -0.49
NUDCD3-201ENST00000338427 GGNQ86UU5 652 aa12.02□□□□□ -0.49
NUDCD3-201ENST00000338427 LSRQ86X29 649 aaPredicted RBP12.02□□□□□ -0.49
NUDCD3-201ENST00000338427 TGIF2LYQ8IUE0 185 aa12.02□□□□□ -0.49
NUDCD3-201ENST00000338427 CDRT4Q8N9R6 151 aa12.02□□□□□ -0.49
NUDCD3-201ENST00000338427 POC1BQ8TC44 478 aa12.02□□□□□ -0.49
NUDCD3-201ENST00000338427 CDS1Q92903 461 aa12.02□□□□□ -0.49
NUDCD3-201ENST00000338427 ZNF524Q96C55 264 aa12.02□□□□□ -0.49
NUDCD3-201ENST00000338427 FAM120BQ96EK7 910 aaKnown RBP12.02□□□□□ -0.49
NUDCD3-201ENST00000338427 ZFP3Q96NJ6 502 aa12.02□□□□□ -0.49
NUDCD3-201ENST00000338427 IQCGQ9H095 443 aaKnown RBP12.02□□□□□ -0.49
NUDCD3-201ENST00000338427 PIGMQ9H3S5 423 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms