RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 FOLR3P41439 243 aa13.57□□□□□ -0.24
CBX3-201ENST00000337620 EEF1A1P68104 462 aaKnown RBP13.57□□□□□ -0.24
CBX3-201ENST00000337620 RNF4P78317 190 aa13.57□□□□□ -0.24
CBX3-201ENST00000337620 PIN1Q13526 163 aaPredicted RBP13.57□□□□□ -0.24
CBX3-201ENST00000337620 EIPR1Q53HC9 387 aa13.57□□□□□ -0.24
CBX3-201ENST00000337620 HSDL2Q6YN16 418 aa13.57□□□□□ -0.24
CBX3-201ENST00000337620 ZNF605Q86T29 641 aa13.57□□□□□ -0.24
CBX3-201ENST00000337620 RBM4BQ9BQ04 359 aaKnown RBP13.57□□□□□ -0.24
CBX3-201ENST00000337620 RBM4Q9BWF3 364 aaKnown RBP13.57□□□□□ -0.24
CBX3-201ENST00000337620 PRR14Q9BWN1 585 aa13.57□□□□□ -0.24
CBX3-201ENST00000337620 CTPS2Q9NRF8 586 aa13.57□□□□□ -0.24
CBX3-201ENST00000337620 ACER3Q9NUN7 267 aa13.57□□□□□ -0.24
CBX3-201ENST00000337620 AP4B1Q9Y6B7 739 aa13.57□□□□□ -0.24
CBX3-201ENST00000337620 HS6ST1O60243 411 aa13.57□□□□□ -0.24
CBX3-201ENST00000337620 ALPLP05186 524 aa13.57□□□□□ -0.24
CBX3-201ENST00000337620 GUSBP08236 651 aa13.57□□□□□ -0.24
CBX3-201ENST00000337620 RGS8P57771 180 aaPredicted RBP13.57□□□□□ -0.24
CBX3-201ENST00000337620 HOXC5Q00444 222 aa13.57□□□□□ -0.24
CBX3-201ENST00000337620 NPTX1Q15818 432 aa13.57□□□□□ -0.24
CBX3-201ENST00000337620 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.57□□□□□ -0.24
CBX3-201ENST00000337620 EXOC3L2Q2M3D2 409 aa13.57□□□□□ -0.24
CBX3-201ENST00000337620 MRPL2Q5T653 305 aaKnown RBP13.57□□□□□ -0.24
CBX3-201ENST00000337620 AP1ARQ63HQ0 302 aa13.57□□□□□ -0.24
CBX3-201ENST00000337620 THAP3Q8WTV1 239 aaPredicted RBP13.57□□□□□ -0.24
CBX3-201ENST00000337620 PHF10Q8WUB8 498 aaKnown RBP13.57□□□□□ -0.24
CBX3-201ENST00000337620 CT55Q8WUE5 264 aa13.57□□□□□ -0.24
CBX3-201ENST00000337620 NRBF2Q96F24 287 aa13.57□□□□□ -0.24
CBX3-201ENST00000337620 VMP1Q96GC9 406 aa13.57□□□□□ -0.24
CBX3-201ENST00000337620 ZNF570Q96NI8 536 aa13.57□□□□□ -0.24
CBX3-201ENST00000337620 OSBPL10Q9BXB5 764 aa13.57□□□□□ -0.24
CBX3-201ENST00000337620 SPRY4Q9C004 299 aa13.57□□□□□ -0.24
CBX3-201ENST00000337620 SEMA4CQ9C0C4 833 aa13.57□□□□□ -0.24
CBX3-201ENST00000337620 ARMC7Q9H6L4 198 aa13.57□□□□□ -0.24
CBX3-201ENST00000337620 NMNAT1Q9HAN9 279 aaPredicted RBP13.57□□□□□ -0.24
CBX3-201ENST00000337620 ZNF223Q9UK11 482 aaPredicted RBP13.57□□□□□ -0.24
CBX3-201ENST00000337620 MRTO4Q9UKD2 239 aaKnown RBP13.57□□□□□ -0.24
CBX3-201ENST00000337620 RAB26Q9ULW5 256 aa13.57□□□□□ -0.24
CBX3-201ENST00000337620 DLGAP1O14490 977 aa13.56□□□□□ -0.24
CBX3-201ENST00000337620 REM1O75628 298 aa13.56□□□□□ -0.24
CBX3-201ENST00000337620 RPSAP08865 295 aaKnown RBP13.56□□□□□ -0.24
CBX3-201ENST00000337620 CD63P08962 238 aa13.56□□□□□ -0.24
CBX3-201ENST00000337620 CSRP1P21291 193 aaKnown RBP13.56□□□□□ -0.24
CBX3-201ENST00000337620 ATP12AP54707 1039 aa13.56□□□□□ -0.24
CBX3-201ENST00000337620 SLC26A5P58743 744 aa13.56□□□□□ -0.24
CBX3-201ENST00000337620 PPP2R2BQ00005 443 aa13.56□□□□□ -0.24
CBX3-201ENST00000337620 TAGAPQ8N103 731 aa13.56□□□□□ -0.24
CBX3-201ENST00000337620 OR4C3Q8NH37 302 aa13.56□□□□□ -0.24
CBX3-201ENST00000337620 SMPD3Q9NY59 655 aaPredicted RBP13.56□□□□□ -0.24
CBX3-201ENST00000337620 A4GNTQ9UNA3 340 aa13.56□□□□□ -0.24
CBX3-201ENST00000337620 LRCH1Q9Y2L9 728 aa13.56□□□□□ -0.24
CBX3-201ENST00000337620 TRBV11-1A0A0K0K1C0 115 aa13.55□□□□□ -0.24
CBX3-201ENST00000337620 PCDH17O14917 1159 aa13.55□□□□□ -0.24
CBX3-201ENST00000337620 TPST2O60704 377 aa13.55□□□□□ -0.24
CBX3-201ENST00000337620 SNAP29O95721 258 aa13.55□□□□□ -0.24
CBX3-201ENST00000337620 IL33O95760 270 aa13.55□□□□□ -0.24
CBX3-201ENST00000337620 H1F0P07305 194 aaKnown RBP13.55□□□□□ -0.24
CBX3-201ENST00000337620 KRT20P35900 424 aa13.55□□□□□ -0.24
CBX3-201ENST00000337620 PSMD4P55036 377 aaKnown RBP13.55□□□□□ -0.24
CBX3-201ENST00000337620 RPS18P62269 152 aaKnown RBP13.55□□□□□ -0.24
CBX3-201ENST00000337620 ZIK1Q3SY52 487 aaPredicted RBP13.55□□□□□ -0.24
CBX3-201ENST00000337620 FGD3Q5JSP0 725 aa13.55□□□□□ -0.24
CBX3-201ENST00000337620 COLEC12Q5KU26 742 aa13.55□□□□□ -0.24
CBX3-201ENST00000337620 OR4C15Q8NGM1 316 aa13.55□□□□□ -0.24
CBX3-201ENST00000337620 GIPC3Q8TF64 312 aa13.55□□□□□ -0.24
CBX3-201ENST00000337620 ADOQ96SZ5 270 aa13.55□□□□□ -0.24
CBX3-201ENST00000337620 FNDC11Q9BVV2 318 aa13.55□□□□□ -0.24
CBX3-201ENST00000337620 OSBPL11Q9BXB4 747 aa13.55□□□□□ -0.24
CBX3-201ENST00000337620 Q9H521 79 aa13.55□□□□□ -0.24
CBX3-201ENST00000337620 KIF17Q9P2E2 1029 aa13.55□□□□□ -0.24
CBX3-201ENST00000337620 KCND3Q9UK17 655 aa13.55□□□□□ -0.24
CBX3-201ENST00000337620 PPIEQ9UNP9 301 aaKnown RBP13.55□□□□□ -0.24
CBX3-201ENST00000337620 PCDHGA10Q9Y5H3 936 aa13.55□□□□□ -0.24
CBX3-201ENST00000337620 CDHR4A6H8M9 788 aa13.55□□□□□ -0.24
CBX3-201ENST00000337620 CPSF4LA6NMK7 179 aaKnown RBP13.55□□□□□ -0.24
CBX3-201ENST00000337620 AP3D1O14617 1153 aa13.55□□□□□ -0.24
CBX3-201ENST00000337620 HPRP00739 348 aa13.55□□□□□ -0.24
CBX3-201ENST00000337620 GKN3PP0CG01 181 aa13.55□□□□□ -0.24
CBX3-201ENST00000337620 IL12BP29460 328 aa13.55□□□□□ -0.24
CBX3-201ENST00000337620 TAS2R41P59536 307 aa13.55□□□□□ -0.24
CBX3-201ENST00000337620 IL1RL1Q01638 556 aa13.55□□□□□ -0.24
CBX3-201ENST00000337620 PLCXD2Q0VAA5 305 aa13.55□□□□□ -0.24
CBX3-201ENST00000337620 MED21Q13503 144 aa13.55□□□□□ -0.24
CBX3-201ENST00000337620 ZNF141Q15928 474 aa13.55□□□□□ -0.24
CBX3-201ENST00000337620 NHSL2Q5HYW2 709 aa13.55□□□□□ -0.24
CBX3-201ENST00000337620 RNF220Q5VTB9 566 aa13.55□□□□□ -0.24
CBX3-201ENST00000337620 C16orf47Q6ZP98 133 aaPredicted RBP13.55□□□□□ -0.24
CBX3-201ENST00000337620 TSPYL5Q86VY4 417 aaPredicted RBP13.55□□□□□ -0.24
CBX3-201ENST00000337620 TMPRSS12Q86WS5 348 aa13.55□□□□□ -0.24
CBX3-201ENST00000337620 ESX1Q8N693 406 aa13.55□□□□□ -0.24
CBX3-201ENST00000337620 ATG16L2Q8NAA4 619 aa13.55□□□□□ -0.24
CBX3-201ENST00000337620 CYGBQ8WWM9 190 aa13.55□□□□□ -0.24
CBX3-201ENST00000337620 DIO2Q92813 273 aa13.55□□□□□ -0.24
CBX3-201ENST00000337620 HSPBAP1Q96EW2 488 aa13.55□□□□□ -0.24
CBX3-201ENST00000337620 ALPK1Q96QP1 1244 aa13.55□□□□□ -0.24
CBX3-201ENST00000337620 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.55□□□□□ -0.24
CBX3-201ENST00000337620 USE1Q9NZ43 259 aa13.55□□□□□ -0.24
CBX3-201ENST00000337620 ACAD8Q9UKU7 415 aa13.55□□□□□ -0.24
CBX3-201ENST00000337620 TCFL5Q9UL49 500 aa13.55□□□□□ -0.24
CBX3-201ENST00000337620 FARSAQ9Y285 508 aaKnown RBP13.55□□□□□ -0.24
CBX3-201ENST00000337620 HS3ST3B1Q9Y662 390 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms