RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 ADAM11O75078 769 aa11.71□□□□□ -0.54
LIMK1-201ENST00000336180 TP53P04637 393 aaPredicted RBP11.71□□□□□ -0.54
LIMK1-201ENST00000336180 HNRNPCL4P0DMR1 293 aa11.71□□□□□ -0.54
LIMK1-201ENST00000336180 CD79BP40259 229 aa11.71□□□□□ -0.54
LIMK1-201ENST00000336180 MLLT3P42568 568 aaPredicted RBP11.71□□□□□ -0.54
LIMK1-201ENST00000336180 CCR5P51681 352 aa11.71□□□□□ -0.54
LIMK1-201ENST00000336180 STK11Q15831 433 aa11.71□□□□□ -0.54
LIMK1-201ENST00000336180 WDR88Q6ZMY6 472 aa11.71□□□□□ -0.54
LIMK1-201ENST00000336180 PRSS48Q7RTY5 328 aa11.71□□□□□ -0.54
LIMK1-201ENST00000336180 PRR22Q8IZ63 422 aa11.71□□□□□ -0.54
LIMK1-201ENST00000336180 SPERTQ8NA61 448 aa11.71□□□□□ -0.54
LIMK1-201ENST00000336180 MORN4Q8NDC4 146 aa11.71□□□□□ -0.54
LIMK1-201ENST00000336180 LRR1Q96L50 414 aa11.71□□□□□ -0.54
LIMK1-201ENST00000336180 Q96MT0 163 aa11.71□□□□□ -0.54
LIMK1-201ENST00000336180 DPH1Q9BZG8 443 aa11.71□□□□□ -0.54
LIMK1-201ENST00000336180 NRSN2Q9GZP1 204 aa11.71□□□□□ -0.54
LIMK1-201ENST00000336180 LRRN3Q9H3W5 708 aa11.71□□□□□ -0.54
LIMK1-201ENST00000336180 C20orf141Q9NUB4 165 aa11.71□□□□□ -0.54
LIMK1-201ENST00000336180 ASCC3Q8N3C0 2202 aaKnown RBP11.71□□□□□ -0.54
LIMK1-201ENST00000336180 LOC105371267A0A1B0GV96 52 aa11.7□□□□□ -0.54
LIMK1-201ENST00000336180 FAAHO00519 579 aa11.7□□□□□ -0.54
LIMK1-201ENST00000336180 AP3D1O14617 1153 aa11.7□□□□□ -0.54
LIMK1-201ENST00000336180 FOXS1O43638 330 aa11.7□□□□□ -0.54
LIMK1-201ENST00000336180 CDK1P06493 297 aa11.7□□□□□ -0.54
LIMK1-201ENST00000336180 DCTN2Q13561 401 aaKnown RBP11.7□□□□□ -0.54
LIMK1-201ENST00000336180 SMAD2Q15796 467 aaKnown RBP11.7□□□□□ -0.54
LIMK1-201ENST00000336180 PDZK1Q5T2W1 519 aa11.7□□□□□ -0.54
LIMK1-201ENST00000336180 BBS1Q8NFJ9 593 aa11.7□□□□□ -0.54
LIMK1-201ENST00000336180 CNOT9Q92600 299 aaKnown RBP11.7□□□□□ -0.54
LIMK1-201ENST00000336180 SEMA6CQ9H3T2 930 aa11.7□□□□□ -0.54
LIMK1-201ENST00000336180 TBC1D17Q9HA65 648 aa11.7□□□□□ -0.54
LIMK1-201ENST00000336180 CLN6Q9NWW5 311 aa11.7□□□□□ -0.54
LIMK1-201ENST00000336180 ERVK-19Q9WJR5 959 aa11.7□□□□□ -0.54
LIMK1-201ENST00000336180 CSNK1G3Q9Y6M4 447 aa11.7□□□□□ -0.54
LIMK1-201ENST00000336180 A0A0B4J203 849 aa11.7□□□□□ -0.54
LIMK1-201ENST00000336180 AQP9O43315 295 aa11.7□□□□□ -0.54
LIMK1-201ENST00000336180 SERPINI2O75830 405 aa11.7□□□□□ -0.54
LIMK1-201ENST00000336180 CSF2P04141 144 aa11.7□□□□□ -0.54
LIMK1-201ENST00000336180 TGFBR2P37173 567 aa11.7□□□□□ -0.54
LIMK1-201ENST00000336180 EMDP50402 254 aa11.7□□□□□ -0.54
LIMK1-201ENST00000336180 TMBIM6P55061 237 aa11.7□□□□□ -0.54
LIMK1-201ENST00000336180 BNC1Q01954 994 aa11.7□□□□□ -0.54
LIMK1-201ENST00000336180 FIP1L1Q6UN15 594 aaKnown RBP11.7□□□□□ -0.54
LIMK1-201ENST00000336180 GDF7Q7Z4P5 450 aa11.7□□□□□ -0.54
LIMK1-201ENST00000336180 OR2L13Q8N349 312 aa11.7□□□□□ -0.54
LIMK1-201ENST00000336180 NATD1Q8N6N6 113 aa11.7□□□□□ -0.54
LIMK1-201ENST00000336180 SCAIQ8N9R8 606 aa11.7□□□□□ -0.54
LIMK1-201ENST00000336180 ZNF420Q8TAQ5 688 aaPredicted RBP11.7□□□□□ -0.54
LIMK1-201ENST00000336180 SFXN5Q8TD22 340 aa11.7□□□□□ -0.54
LIMK1-201ENST00000336180 ZNF566Q969W8 418 aa11.7□□□□□ -0.54
LIMK1-201ENST00000336180 ART5Q96L15 291 aa11.7□□□□□ -0.54
LIMK1-201ENST00000336180 PRRC1Q96M27 445 aa11.7□□□□□ -0.54
LIMK1-201ENST00000336180 TBX5Q99593 518 aa11.7□□□□□ -0.54
LIMK1-201ENST00000336180 DOK1Q99704 481 aa11.7□□□□□ -0.54
LIMK1-201ENST00000336180 TSSK6Q9BXA6 273 aa11.7□□□□□ -0.54
LIMK1-201ENST00000336180 LRIT1Q9P2V4 623 aa11.7□□□□□ -0.54
LIMK1-201ENST00000336180 ATXN7L1Q9ULK2 861 aaPredicted RBP11.7□□□□□ -0.54
LIMK1-201ENST00000336180 PMF1-BGLAPU3KQ54 211 aa11.7□□□□□ -0.54
LIMK1-201ENST00000336180 RHPN2P1A8MT19 583 aa11.69□□□□□ -0.54
LIMK1-201ENST00000336180 NOTOA8MTQ0 251 aa11.69□□□□□ -0.54
LIMK1-201ENST00000336180 EFCAB9A8MZ26 197 aa11.69□□□□□ -0.54
LIMK1-201ENST00000336180 IGKV1D-16P01601 117 aa11.69□□□□□ -0.54
LIMK1-201ENST00000336180 COL4A2P08572 1712 aa11.69□□□□□ -0.54
LIMK1-201ENST00000336180 ALOX5P09917 674 aa11.69□□□□□ -0.54
LIMK1-201ENST00000336180 FOSL2P15408 326 aa11.69□□□□□ -0.54
LIMK1-201ENST00000336180 CD27P26842 260 aa11.69□□□□□ -0.54
LIMK1-201ENST00000336180 HTR2AP28223 471 aa11.69□□□□□ -0.54
LIMK1-201ENST00000336180 BMP8BP34820 402 aa11.69□□□□□ -0.54
LIMK1-201ENST00000336180 BLKP51451 505 aa11.69□□□□□ -0.54
LIMK1-201ENST00000336180 PRICKLE4Q2TBC4 344 aa11.69□□□□□ -0.54
LIMK1-201ENST00000336180 OR2G6Q5TZ20 316 aa11.69□□□□□ -0.54
LIMK1-201ENST00000336180 RNF44Q7L0R7 432 aa11.69□□□□□ -0.54
LIMK1-201ENST00000336180 SLC30A8Q8IWU4 369 aa11.69□□□□□ -0.54
LIMK1-201ENST00000336180 VWA5B2Q8N398 1253 aa11.69□□□□□ -0.54
LIMK1-201ENST00000336180 CADM2Q8N3J6 435 aa11.69□□□□□ -0.54
LIMK1-201ENST00000336180 RCBTB1Q8NDN9 531 aa11.69□□□□□ -0.54
LIMK1-201ENST00000336180 YIPF6Q96EC8 236 aa11.69□□□□□ -0.54
LIMK1-201ENST00000336180 SLC41A3Q96GZ6 507 aa11.69□□□□□ -0.54
LIMK1-201ENST00000336180 AHCYL2Q96HN2 611 aaKnown RBP11.69□□□□□ -0.54
LIMK1-201ENST00000336180 TUBA1CQ9BQE3 449 aa11.69□□□□□ -0.54
LIMK1-201ENST00000336180 POLE4Q9NR33 117 aa11.69□□□□□ -0.54
LIMK1-201ENST00000336180 PNO1Q9NRX1 252 aaKnown RBP11.69□□□□□ -0.54
LIMK1-201ENST00000336180 YARS2Q9Y2Z4 477 aaKnown RBP11.69□□□□□ -0.54
LIMK1-201ENST00000336180 RNF215Q9Y6U7 377 aa11.69□□□□□ -0.54
LIMK1-201ENST00000336180 SPACA6W5XKT8 324 aa11.69□□□□□ -0.54
LIMK1-201ENST00000336180 THADAQ6YHU6 1953 aa11.69□□□□□ -0.54
LIMK1-201ENST00000336180 TNFRSF10AO00220 468 aa11.69□□□□□ -0.54
LIMK1-201ENST00000336180 AIREO43918 545 aa11.69□□□□□ -0.54
LIMK1-201ENST00000336180 CBX7O95931 251 aa11.69□□□□□ -0.54
LIMK1-201ENST00000336180 ADAP00813 363 aa11.69□□□□□ -0.54
LIMK1-201ENST00000336180 TTKP33981 857 aa11.69□□□□□ -0.54
LIMK1-201ENST00000336180 ITGADQ13349 1161 aa11.69□□□□□ -0.54
LIMK1-201ENST00000336180 LRIT3Q3SXY7 679 aa11.69□□□□□ -0.54
LIMK1-201ENST00000336180 FAM69BQ5VUD6 431 aa11.69□□□□□ -0.54
LIMK1-201ENST00000336180 ADCK1Q86TW2 530 aa11.69□□□□□ -0.54
LIMK1-201ENST00000336180 ZNF687Q8N1G0 1237 aa11.69□□□□□ -0.54
LIMK1-201ENST00000336180 DEPDC4Q8N2C3 294 aa11.69□□□□□ -0.54
LIMK1-201ENST00000336180 OR51A7Q8NH64 312 aa11.69□□□□□ -0.54
LIMK1-201ENST00000336180 TSLPQ969D9 159 aa11.69□□□□□ -0.54
LIMK1-201ENST00000336180 SLC38A4Q969I6 547 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms