RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 PXDC1Q5TGL8 231 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 POMZP3Q6PJE2 187 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 TCTE3Q8IZS6 198 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 ZNF485Q8NCK3 441 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 GLIS3Q8NEA6 775 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 PRRC1Q96M27 445 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 TECTBQ96PL2 329 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 MTHFD2LQ9H903 347 aaPredicted RBP5.24□□□□□ -1.57
PTPRB-202ENST00000334414 ISYNA1Q9NPH2 558 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 TTC24A2A3L6 582 aaPredicted RBP5.24□□□□□ -1.57
PTPRB-202ENST00000334414 MROH6A6NGR9 719 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 HSPB2A8KAH6 182 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 ZNF780AO75290 641 aaPredicted RBP5.24□□□□□ -1.57
PTPRB-202ENST00000334414 OPN1SWP03999 348 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 SERPINE2P07093 398 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 TBPP20226 339 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 CSNK2A1P68400 391 aaPredicted RBP5.24□□□□□ -1.57
PTPRB-202ENST00000334414 HSPB2Q16082 182 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 TTLL10Q6ZVT0 673 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 ABHD12BQ7Z5M8 362 aaPredicted RBP5.24□□□□□ -1.57
PTPRB-202ENST00000334414 ZNF561Q8N587 486 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 CSNK2A3Q8NEV1 391 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 ANKK1Q8NFD2 765 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 OR4K17Q8NGC6 315 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 OR9A1PQ8NGU1 263 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 KATNB1Q9BVA0 655 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 TAS2R16Q9NYV7 291 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 POLLQ9UGP5 575 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 RIMS3Q9UJD0 308 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 SCML2Q9UQR0 700 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 MRPS23Q9Y3D9 190 aaKnown RBP5.24□□□□□ -1.57
PTPRB-202ENST00000334414 HRH3Q9Y5N1 445 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 SYT7O43581 403 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 PIP5K1CO60331 668 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 AHSGP02765 367 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 OR52P1PQ8NH57 321 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 PSMG2Q969U7 264 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 PDGFDQ9GZP0 370 aaPredicted RBP5.24□□□□□ -1.57
PTPRB-202ENST00000334414 LMAN1LQ9HAT1 526 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 PCDHA2Q9Y5H9 948 aa5.24□□□□□ -1.57
PTPRB-202ENST00000334414 TMEM212A6NML5 194 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 ANKRD66B4E2M5 251 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 GABARAPO95166 117 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 PSMB1P20618 241 aaKnown RBP5.23□□□□□ -1.57
PTPRB-202ENST00000334414 AQP2P41181 271 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 SORDQ00796 357 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 GKN2Q86XP6 184 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 FUNDC1Q8IVP5 155 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 MTURNQ8N3F0 131 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 TANKQ92844 425 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 DUS2Q9NX74 493 aaKnown RBP5.23□□□□□ -1.57
PTPRB-202ENST00000334414 JTBO76095 146 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 GABRA2P47869 451 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 SUMO1P63165 101 aaKnown RBP5.23□□□□□ -1.57
PTPRB-202ENST00000334414 RING1Q06587 406 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 P2RY14Q15391 338 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 SF3B4Q15427 424 aaKnown RBP eCLIP5.23□□□□□ -1.57
PTPRB-202ENST00000334414 AMZ1Q400G9 498 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 TCTE1Q5JU00 501 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 ENPP6Q6UWR7 440 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 TAC4Q86UU9 113 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 YIPF5Q969M3 257 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 RAB7BQ96AH8 199 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 MIB2Q96AX9 1013 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 TMEM18Q96B42 140 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 FAM46AQ96IP4 442 aaKnown RBP5.23□□□□□ -1.57
PTPRB-202ENST00000334414 FBXL18Q96ME1 805 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 ELF4Q99607 663 aaPredicted RBP5.23□□□□□ -1.57
PTPRB-202ENST00000334414 STRA6Q9BX79 667 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 ZNF442Q9H7R0 627 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 MOB1AQ9H8S9 216 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 CRLF2Q9HC73 371 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 CENPMQ9NSP4 180 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 PPP5D1E7EU14 171 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 NDUFB2O95178 105 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 JUNP05412 331 aaKnown RBP5.23□□□□□ -1.57
PTPRB-202ENST00000334414 POU4F3Q15319 338 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 TAF9Q16594 264 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 ZC3H14Q6PJT7 736 aaKnown RBP5.23□□□□□ -1.57
PTPRB-202ENST00000334414 DHRS4L2Q6PKH6 230 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 COX15Q7KZN9 410 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.23□□□□□ -1.57
PTPRB-202ENST00000334414 KAZALD1Q96I82 304 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 OSER1Q9NX31 292 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 ANKRD34BA5PLL1 514 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 SERPINA7P05543 415 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 KLK1P06870 262 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 PYCR1P32322 319 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 PSMD8P48556 350 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 SNRPD2P62316 118 aaKnown RBP5.23□□□□□ -1.57
PTPRB-202ENST00000334414 CEACAM7Q14002 265 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 CLPPQ16740 277 aaPredicted RBP5.23□□□□□ -1.57
PTPRB-202ENST00000334414 BAGE3Q86Y29 109 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 BAGE2Q86Y30 109 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 ZNF778Q96MU6 729 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 C17orf62Q9BQA9 187 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 KDM3BQ7LBC6 1761 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 MYH13Q9UKX3 1938 aa5.23□□□□□ -1.57
PTPRB-202ENST00000334414 ELOA3CA0A087WX78 387 aaPredicted RBP5.23□□□□□ -1.57
PTPRB-202ENST00000334414 CXorf49A8MYA2 514 aaPredicted RBP5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms