RNA–Protein interactions for RNA: ENST00000330891.9

BEST3-202, Transcript of bestrophin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene BEST3, Length 3,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-202ENST00000330891 DPEP2Q9H4A9 486 aa6.6□□□□□ -1.35
BEST3-202ENST00000330891 C20orf141Q9NUB4 165 aa6.6□□□□□ -1.35
BEST3-202ENST00000330891 PLCXD1Q9NUJ7 323 aa6.6□□□□□ -1.35
BEST3-202ENST00000330891 TNFRSF10DQ9UBN6 386 aa6.6□□□□□ -1.35
BEST3-202ENST00000330891 ADAM30Q9UKF2 790 aa6.6□□□□□ -1.35
BEST3-202ENST00000330891 ZNF346Q9UL40 294 aaKnown RBP6.6□□□□□ -1.35
BEST3-202ENST00000330891 NDRG2Q9UN36 371 aaKnown RBP6.6□□□□□ -1.35
BEST3-202ENST00000330891 ICKQ9UPZ9 632 aa6.6□□□□□ -1.35
BEST3-202ENST00000330891 MGAT4BQ9UQ53 548 aa6.6□□□□□ -1.35
BEST3-202ENST00000330891 LTBP2Q14767 1821 aa6.6□□□□□ -1.35
BEST3-202ENST00000330891 FAAHO00519 579 aa6.6□□□□□ -1.35
BEST3-202ENST00000330891 HCN1O60741 890 aa6.6□□□□□ -1.35
BEST3-202ENST00000330891 TP53P04637 393 aaPredicted RBP6.6□□□□□ -1.35
BEST3-202ENST00000330891 SRPRAP08240 638 aaKnown RBP6.6□□□□□ -1.35
BEST3-202ENST00000330891 ATP5A1P25705 553 aaKnown RBP6.6□□□□□ -1.35
BEST3-202ENST00000330891 TLX1P31314 330 aaPredicted RBP6.6□□□□□ -1.35
BEST3-202ENST00000330891 KHKP50053 298 aa6.6□□□□□ -1.35
BEST3-202ENST00000330891 RAB28P51157 221 aa6.6□□□□□ -1.35
BEST3-202ENST00000330891 HNRNPFP52597 415 aaKnown RBP6.6□□□□□ -1.35
BEST3-202ENST00000330891 ATP12AP54707 1039 aa6.6□□□□□ -1.35
BEST3-202ENST00000330891 OR10A3P58181 314 aa6.6□□□□□ -1.35
BEST3-202ENST00000330891 MAPK14Q16539 360 aa6.6□□□□□ -1.35
BEST3-202ENST00000330891 ZNF658BQ4V348 819 aaPredicted RBP6.6□□□□□ -1.35
BEST3-202ENST00000330891 KLHL22Q53GT1 634 aa6.6□□□□□ -1.35
BEST3-202ENST00000330891 SNAP47Q5SQN1 464 aa6.6□□□□□ -1.35
BEST3-202ENST00000330891 AGBL4Q5VU57 503 aa6.6□□□□□ -1.35
BEST3-202ENST00000330891 SLX4IPQ5VYV7 408 aa6.6□□□□□ -1.35
BEST3-202ENST00000330891 ARMC6Q6NXE6 501 aa6.6□□□□□ -1.35
BEST3-202ENST00000330891 MZT2AQ6P582 158 aa6.6□□□□□ -1.35
BEST3-202ENST00000330891 FGD2Q7Z6J4 655 aa6.6□□□□□ -1.35
BEST3-202ENST00000330891 NANOGP1Q8N7R0 232 aa6.6□□□□□ -1.35
BEST3-202ENST00000330891 SAMD12Q8N8I0 201 aa6.6□□□□□ -1.35
BEST3-202ENST00000330891 OR4Q3Q8NH05 313 aa6.6□□□□□ -1.35
BEST3-202ENST00000330891 RASSF5Q8WWW0 418 aa6.6□□□□□ -1.35
BEST3-202ENST00000330891 SMARCD2Q92925 531 aa6.6□□□□□ -1.35
BEST3-202ENST00000330891 GCDHQ92947 438 aaPredicted RBP6.6□□□□□ -1.35
BEST3-202ENST00000330891 SLC35A4Q96G79 324 aa6.6□□□□□ -1.35
BEST3-202ENST00000330891 MIXL1Q9H2W2 232 aa6.6□□□□□ -1.35
BEST3-202ENST00000330891 CPNE5Q9HCH3 593 aa6.6□□□□□ -1.35
BEST3-202ENST00000330891 ING3Q9NXR8 418 aa6.6□□□□□ -1.35
BEST3-202ENST00000330891 OR10H1Q9Y4A9 318 aa6.6□□□□□ -1.35
BEST3-202ENST00000330891 SPACA6W5XKT8 324 aa6.6□□□□□ -1.35
BEST3-202ENST00000330891 MDC1Q14676 2089 aaKnown RBP6.6□□□□□ -1.35
BEST3-202ENST00000330891 MAN2B1O00754 1011 aa6.6□□□□□ -1.35
BEST3-202ENST00000330891 HCRTR1O43613 425 aa6.6□□□□□ -1.35
BEST3-202ENST00000330891 VEGFDO43915 354 aa6.6□□□□□ -1.35
BEST3-202ENST00000330891 RAB36O95755 333 aa6.6□□□□□ -1.35
BEST3-202ENST00000330891 PEBP1P30086 187 aaKnown RBP6.6□□□□□ -1.35
BEST3-202ENST00000330891 GCGRP47871 477 aa6.6□□□□□ -1.35
BEST3-202ENST00000330891 RUNX3Q13761 415 aa6.6□□□□□ -1.35
BEST3-202ENST00000330891 E2F2Q14209 437 aa6.6□□□□□ -1.35
BEST3-202ENST00000330891 CNIH2Q6PI25 160 aa6.6□□□□□ -1.35
BEST3-202ENST00000330891 LYPD4Q6UWN0 246 aa6.6□□□□□ -1.35
BEST3-202ENST00000330891 CCDC190Q86UF4 302 aa6.6□□□□□ -1.35
BEST3-202ENST00000330891 OOSP2Q86WS3 158 aa6.6□□□□□ -1.35
BEST3-202ENST00000330891 PRSS58Q8IYP2 241 aa6.6□□□□□ -1.35
BEST3-202ENST00000330891 COX18Q8N8Q8 333 aa6.6□□□□□ -1.35
BEST3-202ENST00000330891 OR2L3Q8NG85 312 aa6.6□□□□□ -1.35
BEST3-202ENST00000330891 CREB3L4Q8TEY5 395 aa6.6□□□□□ -1.35
BEST3-202ENST00000330891 SETD7Q8WTS6 366 aaKnown RBP6.6□□□□□ -1.35
BEST3-202ENST00000330891 HMGB4Q8WW32 186 aa6.6□□□□□ -1.35
BEST3-202ENST00000330891 TBC1D20Q96BZ9 403 aa6.6□□□□□ -1.35
BEST3-202ENST00000330891 ZNF486Q96H40 463 aaPredicted RBP6.6□□□□□ -1.35
BEST3-202ENST00000330891 CDCA4Q9BXL8 241 aa6.6□□□□□ -1.35
BEST3-202ENST00000330891 IRF2BPLQ9H1B7 796 aa6.6□□□□□ -1.35
BEST3-202ENST00000330891 CDCP1Q9H5V8 836 aa6.6□□□□□ -1.35
BEST3-202ENST00000330891 KRCC1Q9NPI7 259 aaPredicted RBP6.6□□□□□ -1.35
BEST3-202ENST00000330891 FKBP14Q9NWM8 211 aa6.6□□□□□ -1.35
BEST3-202ENST00000330891 COQ3Q9NZJ6 369 aa6.6□□□□□ -1.35
BEST3-202ENST00000330891 KCMF1Q9P0J7 381 aa6.6□□□□□ -1.35
BEST3-202ENST00000330891 NDOR1Q9UHB4 597 aa6.6□□□□□ -1.35
BEST3-202ENST00000330891 STUB1Q9UNE7 303 aa6.6□□□□□ -1.35
BEST3-202ENST00000330891 WDR45Q9Y484 360 aa6.6□□□□□ -1.35
BEST3-202ENST00000330891 MUC3AQ02505 3323 aa6.6□□□□□ -1.35
BEST3-202ENST00000330891 DMDP11532 3685 aa6.6□□□□□ -1.35
BEST3-202ENST00000330891 MEIOCA2RUB1 952 aa6.59□□□□□ -1.35
BEST3-202ENST00000330891 ISPDA4D126 451 aa6.59□□□□□ -1.35
BEST3-202ENST00000330891 E9PI62 339 aa6.59□□□□□ -1.35
BEST3-202ENST00000330891 CACNB4O00305 520 aaPredicted RBP6.59□□□□□ -1.35
BEST3-202ENST00000330891 STK25O00506 426 aa6.59□□□□□ -1.35
BEST3-202ENST00000330891 SMAD9O15198 467 aaKnown RBP6.59□□□□□ -1.35
BEST3-202ENST00000330891 P2RX6O15547 441 aa6.59□□□□□ -1.35
BEST3-202ENST00000330891 ZNF24P17028 368 aa6.59□□□□□ -1.35
BEST3-202ENST00000330891 NAA10P41227 235 aaPredicted RBP6.59□□□□□ -1.35
BEST3-202ENST00000330891 SRP9P49458 86 aaKnown RBP6.59□□□□□ -1.35
BEST3-202ENST00000330891 HMGA2P52926 109 aa6.59□□□□□ -1.35
BEST3-202ENST00000330891 GNA13Q14344 377 aa6.59□□□□□ -1.35
BEST3-202ENST00000330891 SUZ12Q15022 739 aaKnown RBP6.59□□□□□ -1.35
BEST3-202ENST00000330891 ABHD17CQ6PCB6 329 aa6.59□□□□□ -1.35
BEST3-202ENST00000330891 ZAR1Q86SH2 424 aa6.59□□□□□ -1.35
BEST3-202ENST00000330891 PEX5LQ8IYB4 626 aa6.59□□□□□ -1.35
BEST3-202ENST00000330891 LRRC17Q8N6Y2 441 aa6.59□□□□□ -1.35
BEST3-202ENST00000330891 ASCC1Q8N9N2 400 aaKnown RBP6.59□□□□□ -1.35
BEST3-202ENST00000330891 CHAC2Q8WUX2 184 aa6.59□□□□□ -1.35
BEST3-202ENST00000330891 APOBEC4Q8WW27 367 aaKnown RBP6.59□□□□□ -1.35
BEST3-202ENST00000330891 KATNB1Q9BVA0 655 aa6.59□□□□□ -1.35
BEST3-202ENST00000330891 SLC17A9Q9BYT1 436 aa6.59□□□□□ -1.35
BEST3-202ENST00000330891 HOXD1Q9GZZ0 328 aa6.59□□□□□ -1.35
BEST3-202ENST00000330891 SLC38A1Q9H2H9 487 aa6.59□□□□□ -1.35
BEST3-202ENST00000330891 TCEAL2Q9H3H9 227 aaPredicted RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms