RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 OSTF1Q92882 214 aa13.12□□□□□ -0.31
ATP2C1-201ENST00000328560 ST6GAL2Q96JF0 529 aa13.12□□□□□ -0.31
ATP2C1-201ENST00000328560 ARHGAP9Q9BRR9 750 aa13.12□□□□□ -0.31
ATP2C1-201ENST00000328560 FGF20Q9NP95 211 aaPredicted RBP13.12□□□□□ -0.31
ATP2C1-201ENST00000328560 CES1P1Q9UKY3 287 aa13.12□□□□□ -0.31
ATP2C1-201ENST00000328560 COL4A3Q01955 1670 aa13.12□□□□□ -0.31
ATP2C1-201ENST00000328560 HRO43593 1189 aa13.12□□□□□ -0.31
ATP2C1-201ENST00000328560 PRG2P13727 222 aa13.12□□□□□ -0.31
ATP2C1-201ENST00000328560 PAICSP22234 425 aaKnown RBP13.12□□□□□ -0.31
ATP2C1-201ENST00000328560 EFNB1P98172 346 aa13.12□□□□□ -0.31
ATP2C1-201ENST00000328560 PUS10Q3MIT2 529 aaKnown RBP13.12□□□□□ -0.31
ATP2C1-201ENST00000328560 AMIGO1Q86WK6 493 aa13.12□□□□□ -0.31
ATP2C1-201ENST00000328560 KLHL36Q8N4N3 616 aa13.12□□□□□ -0.31
ATP2C1-201ENST00000328560 CCL4L1Q8NHW4 92 aa13.12□□□□□ -0.31
ATP2C1-201ENST00000328560 TP53INP1Q96A56 240 aa13.12□□□□□ -0.31
ATP2C1-201ENST00000328560 PLA2G2FQ9BZM2 168 aa13.12□□□□□ -0.31
ATP2C1-201ENST00000328560 OR51V1Q9H2C8 321 aa13.12□□□□□ -0.31
ATP2C1-201ENST00000328560 HINT3Q9NQE9 182 aaKnown RBP13.12□□□□□ -0.31
ATP2C1-201ENST00000328560 TBC1D29Q9UFV1 150 aa13.12□□□□□ -0.31
ATP2C1-201ENST00000328560 SF3B6Q9Y3B4 125 aaKnown RBP13.12□□□□□ -0.31
ATP2C1-201ENST00000328560 KIAA1549LQ6ZVL6 1849 aa13.12□□□□□ -0.31
ATP2C1-201ENST00000328560 IRGMA1A4Y4 181 aa13.12□□□□□ -0.31
ATP2C1-201ENST00000328560 LRRC72A6NJI9 287 aa13.12□□□□□ -0.31
ATP2C1-201ENST00000328560 GPR89AB7ZAQ6 455 aa13.12□□□□□ -0.31
ATP2C1-201ENST00000328560 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.12□□□□□ -0.31
ATP2C1-201ENST00000328560 REM1O75628 298 aa13.12□□□□□ -0.31
ATP2C1-201ENST00000328560 GPR89BP0CG08 455 aa13.12□□□□□ -0.31
ATP2C1-201ENST00000328560 IGFALSP35858 605 aa13.12□□□□□ -0.31
ATP2C1-201ENST00000328560 KIR2DL3P43628 341 aa13.12□□□□□ -0.31
ATP2C1-201ENST00000328560 AGERQ15109 404 aa13.12□□□□□ -0.31
ATP2C1-201ENST00000328560 PGGHGQ32M88 737 aa13.12□□□□□ -0.31
ATP2C1-201ENST00000328560 LCN1P1Q5VSP4 162 aa13.12□□□□□ -0.31
ATP2C1-201ENST00000328560 ZNF57Q68EA5 555 aaPredicted RBP13.12□□□□□ -0.31
ATP2C1-201ENST00000328560 PEX5LQ8IYB4 626 aa13.12□□□□□ -0.31
ATP2C1-201ENST00000328560 C7orf57Q8NEG2 295 aa13.12□□□□□ -0.31
ATP2C1-201ENST00000328560 SMAP2Q8WU79 429 aaPredicted RBP13.12□□□□□ -0.31
ATP2C1-201ENST00000328560 MSLNLQ96KJ4 702 aa13.12□□□□□ -0.31
ATP2C1-201ENST00000328560 FRMD6Q96NE9 622 aa13.12□□□□□ -0.31
ATP2C1-201ENST00000328560 GFM1Q96RP9 751 aaKnown RBP13.12□□□□□ -0.31
ATP2C1-201ENST00000328560 ISG20L2Q9H9L3 353 aaKnown RBP13.12□□□□□ -0.31
ATP2C1-201ENST00000328560 POLMQ9NP87 494 aaPredicted RBP13.12□□□□□ -0.31
ATP2C1-201ENST00000328560 OBP2AQ9NY56 170 aa13.12□□□□□ -0.31
ATP2C1-201ENST00000328560 CALML5Q9NZT1 146 aa13.12□□□□□ -0.31
ATP2C1-201ENST00000328560 LIPT1Q9Y234 373 aa13.12□□□□□ -0.31
ATP2C1-201ENST00000328560 B4DXG7 233 aa13.11□□□□□ -0.31
ATP2C1-201ENST00000328560 GABRPO00591 440 aa13.11□□□□□ -0.31
ATP2C1-201ENST00000328560 RNGTTO60942 597 aaKnown RBP13.11□□□□□ -0.31
ATP2C1-201ENST00000328560 THY1P04216 161 aa13.11□□□□□ -0.31
ATP2C1-201ENST00000328560 MRPL3P09001 348 aaKnown RBP13.11□□□□□ -0.31
ATP2C1-201ENST00000328560 DSG2Q14126 1118 aa13.11□□□□□ -0.31
ATP2C1-201ENST00000328560 FAM109BQ6ICB4 259 aaPredicted RBP13.11□□□□□ -0.31
ATP2C1-201ENST00000328560 ENPP7Q6UWV6 458 aa13.11□□□□□ -0.31
ATP2C1-201ENST00000328560 GDPD1Q8N9F7 314 aa13.11□□□□□ -0.31
ATP2C1-201ENST00000328560 IL17RCQ8NAC3 791 aa13.11□□□□□ -0.31
ATP2C1-201ENST00000328560 ZNF764Q96H86 408 aaPredicted RBP13.11□□□□□ -0.31
ATP2C1-201ENST00000328560 TTTY10Q9BZA0 68 aa13.11□□□□□ -0.31
ATP2C1-201ENST00000328560 NLKQ9UBE8 527 aa13.11□□□□□ -0.31
ATP2C1-201ENST00000328560 MDC1Q14676 2089 aaKnown RBP13.11□□□□□ -0.31
ATP2C1-201ENST00000328560 SHISA3A0PJX4 238 aa13.11□□□□□ -0.31
ATP2C1-201ENST00000328560 POM121BA6NF01 834 aa13.11□□□□□ -0.31
ATP2C1-201ENST00000328560 H0Y8X5 98 aa13.11□□□□□ -0.31
ATP2C1-201ENST00000328560 STK25O00506 426 aa13.11□□□□□ -0.31
ATP2C1-201ENST00000328560 SURF4O15260 269 aa13.11□□□□□ -0.31
ATP2C1-201ENST00000328560 HYAL3O43820 417 aaPredicted RBP13.11□□□□□ -0.31
ATP2C1-201ENST00000328560 AKAP8O43823 692 aaKnown RBP13.11□□□□□ -0.31
ATP2C1-201ENST00000328560 DUSP5Q16690 384 aa13.11□□□□□ -0.31
ATP2C1-201ENST00000328560 TRMT12Q53H54 448 aaKnown RBP13.11□□□□□ -0.31
ATP2C1-201ENST00000328560 SLC25A30Q5SVS4 291 aa13.11□□□□□ -0.31
ATP2C1-201ENST00000328560 IDNKQ5T6J7 187 aa13.11□□□□□ -0.31
ATP2C1-201ENST00000328560 RNLSQ5VYX0 342 aa13.11□□□□□ -0.31
ATP2C1-201ENST00000328560 LRRC25Q8N386 305 aaPredicted RBP13.11□□□□□ -0.31
ATP2C1-201ENST00000328560 OR2T33Q8NG76 320 aa13.11□□□□□ -0.31
ATP2C1-201ENST00000328560 OR10H4Q8NGA5 316 aa13.11□□□□□ -0.31
ATP2C1-201ENST00000328560 TSACCQ96A04 125 aaPredicted RBP13.11□□□□□ -0.31
ATP2C1-201ENST00000328560 ZNF681Q96N22 645 aa13.11□□□□□ -0.31
ATP2C1-201ENST00000328560 ARHGDIGQ99819 225 aa13.11□□□□□ -0.31
ATP2C1-201ENST00000328560 TMEM246Q9BRR3 403 aa13.11□□□□□ -0.31
ATP2C1-201ENST00000328560 TIMM29Q9BSF4 260 aa13.11□□□□□ -0.31
ATP2C1-201ENST00000328560 APOOQ9BUR5 198 aa13.11□□□□□ -0.31
ATP2C1-201ENST00000328560 SRMSQ9H3Y6 488 aa13.11□□□□□ -0.31
ATP2C1-201ENST00000328560 ATP13A2Q9NQ11 1180 aa13.11□□□□□ -0.31
ATP2C1-201ENST00000328560 ZNF443Q9Y2A4 671 aaPredicted RBP13.11□□□□□ -0.31
ATP2C1-201ENST00000328560 COLEC10Q9Y6Z7 277 aa13.11□□□□□ -0.31
ATP2C1-201ENST00000328560 C12orf71A8MTZ7 269 aa13.11□□□□□ -0.31
ATP2C1-201ENST00000328560 SYT5O00445 386 aa13.11□□□□□ -0.31
ATP2C1-201ENST00000328560 PLA2G10O15496 165 aa13.11□□□□□ -0.31
ATP2C1-201ENST00000328560 LDB3O75112 727 aa13.11□□□□□ -0.31
ATP2C1-201ENST00000328560 HLA-DPB1P04440 258 aa13.11□□□□□ -0.31
ATP2C1-201ENST00000328560 POU2F2P09086 479 aa13.11□□□□□ -0.31
ATP2C1-201ENST00000328560 NDUFV2P19404 249 aa13.11□□□□□ -0.31
ATP2C1-201ENST00000328560 CTBP2P56545 445 aa13.11□□□□□ -0.31
ATP2C1-201ENST00000328560 ABATP80404 500 aa13.11□□□□□ -0.31
ATP2C1-201ENST00000328560 RGS1Q08116 209 aa13.11□□□□□ -0.31
ATP2C1-201ENST00000328560 DUSP6Q16828 381 aa13.11□□□□□ -0.31
ATP2C1-201ENST00000328560 MFSD12Q6NUT3 480 aa13.11□□□□□ -0.31
ATP2C1-201ENST00000328560 FIGNL1Q6PIW4 674 aa13.11□□□□□ -0.31
ATP2C1-201ENST00000328560 IL20RBQ6UXL0 311 aa13.11□□□□□ -0.31
ATP2C1-201ENST00000328560 CXXC5Q7LFL8 322 aaKnown RBP13.11□□□□□ -0.31
ATP2C1-201ENST00000328560 VWA5B2Q8N398 1253 aa13.11□□□□□ -0.31
ATP2C1-201ENST00000328560 FGF11Q92914 225 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms