RNA–Protein interactions for RNA: ENST00000328354.10

CHEK2-201, Transcript of checkpoint kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHEK2, Length 1,867 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-201ENST00000328354 PRR14Q9BWN1 585 aa13.21□□□□□ -0.3
CHEK2-201ENST00000328354 OR10A5Q9H207 317 aa13.21□□□□□ -0.3
CHEK2-201ENST00000328354 ARMC7Q9H6L4 198 aa13.21□□□□□ -0.3
CHEK2-201ENST00000328354 ZNF304Q9HCX3 659 aa13.21□□□□□ -0.3
CHEK2-201ENST00000328354 CTPS2Q9NRF8 586 aa13.21□□□□□ -0.3
CHEK2-201ENST00000328354 RSL24D1Q9UHA3 163 aaKnown RBP13.21□□□□□ -0.3
CHEK2-201ENST00000328354 ATXN7L1Q9ULK2 861 aaPredicted RBP13.21□□□□□ -0.3
CHEK2-201ENST00000328354 DTX4Q9Y2E6 619 aa13.21□□□□□ -0.3
CHEK2-201ENST00000328354 PCDHGA10Q9Y5H3 936 aa13.21□□□□□ -0.3
CHEK2-201ENST00000328354 CCDC160A6NGH7 325 aa13.2□□□□□ -0.3
CHEK2-201ENST00000328354 MPZL2O60487 215 aa13.2□□□□□ -0.3
CHEK2-201ENST00000328354 SEC14L2O76054 403 aa13.2□□□□□ -0.3
CHEK2-201ENST00000328354 THY1P04216 161 aa13.2□□□□□ -0.3
CHEK2-201ENST00000328354 IFNA16P05015 189 aa13.2□□□□□ -0.3
CHEK2-201ENST00000328354 ITIH1P19827 911 aa13.2□□□□□ -0.3
CHEK2-201ENST00000328354 FBLP22087 321 aaKnown RBP13.2□□□□□ -0.3
CHEK2-201ENST00000328354 IDH2P48735 452 aaKnown RBP13.2□□□□□ -0.3
CHEK2-201ENST00000328354 CCL7P80098 99 aa13.2□□□□□ -0.3
CHEK2-201ENST00000328354 ACY1Q03154 408 aa13.2□□□□□ -0.3
CHEK2-201ENST00000328354 NEDD8Q15843 81 aa13.2□□□□□ -0.3
CHEK2-201ENST00000328354 DECR1Q16698 335 aa13.2□□□□□ -0.3
CHEK2-201ENST00000328354 SLX4IPQ5VYV7 408 aa13.2□□□□□ -0.3
CHEK2-201ENST00000328354 PLEKHM3Q6ZWE6 761 aa13.2□□□□□ -0.3
CHEK2-201ENST00000328354 RANBP3LQ86VV4 465 aaPredicted RBP13.2□□□□□ -0.3
CHEK2-201ENST00000328354 P3H2Q8IVL5 708 aa13.2□□□□□ -0.3
CHEK2-201ENST00000328354 PTPMT1Q8WUK0 201 aaPredicted RBP13.2□□□□□ -0.3
CHEK2-201ENST00000328354 Q9N2J8 555 aa13.2□□□□□ -0.3
CHEK2-201ENST00000328354 PTTG2Q9NZH5 202 aa13.2□□□□□ -0.3
CHEK2-201ENST00000328354 PRODH2Q9UF12 536 aa13.2□□□□□ -0.3
CHEK2-201ENST00000328354 SRPK3Q9UPE1 567 aa13.2□□□□□ -0.3
CHEK2-201ENST00000328354 SNX5Q9Y5X3 404 aa13.2□□□□□ -0.3
CHEK2-201ENST00000328354 NPIPA5A0A0B4J1W7 369 aa13.19□□□□□ -0.3
CHEK2-201ENST00000328354 NPIPA7E9PJI5 369 aa13.19□□□□□ -0.3
CHEK2-201ENST00000328354 NPIPB9F8W1W9 429 aa13.19□□□□□ -0.3
CHEK2-201ENST00000328354 FAM20BO75063 409 aa13.19□□□□□ -0.3
CHEK2-201ENST00000328354 CER1O95813 267 aa13.19□□□□□ -0.3
CHEK2-201ENST00000328354 IGKV1D-16P01601 117 aa13.19□□□□□ -0.3
CHEK2-201ENST00000328354 RPLP0P05388 317 aaKnown RBP13.19□□□□□ -0.3
CHEK2-201ENST00000328354 NPIPA8P0DM63 369 aa13.19□□□□□ -0.3
CHEK2-201ENST00000328354 CT45A8P0DMV1 189 aa13.19□□□□□ -0.3
CHEK2-201ENST00000328354 CT45A9P0DMV2 189 aa13.19□□□□□ -0.3
CHEK2-201ENST00000328354 GSTM3P21266 225 aa13.19□□□□□ -0.3
CHEK2-201ENST00000328354 PAX7P23759 505 aa13.19□□□□□ -0.3
CHEK2-201ENST00000328354 IFNGR2P38484 337 aa13.19□□□□□ -0.3
CHEK2-201ENST00000328354 GSSP48637 474 aa13.19□□□□□ -0.3
CHEK2-201ENST00000328354 PGDP52209 483 aa13.19□□□□□ -0.3
CHEK2-201ENST00000328354 HOXC5Q00444 222 aa13.19□□□□□ -0.3
CHEK2-201ENST00000328354 RHAGQ02094 409 aa13.19□□□□□ -0.3
CHEK2-201ENST00000328354 PLAURQ03405 335 aa13.19□□□□□ -0.3
CHEK2-201ENST00000328354 PIGFQ07326 219 aa13.19□□□□□ -0.3
CHEK2-201ENST00000328354 FLYWCH1Q4VC44 716 aa13.19□□□□□ -0.3
CHEK2-201ENST00000328354 CT45A2Q5DJT8 189 aa13.19□□□□□ -0.3
CHEK2-201ENST00000328354 C12orf73Q69YU5 71 aa13.19□□□□□ -0.3
CHEK2-201ENST00000328354 SLC23A3Q6PIS1 610 aa13.19□□□□□ -0.3
CHEK2-201ENST00000328354 GDF7Q7Z4P5 450 aa13.19□□□□□ -0.3
CHEK2-201ENST00000328354 BMP8AQ7Z5Y6 402 aa13.19□□□□□ -0.3
CHEK2-201ENST00000328354 GRAMD2AQ8IUY3 354 aa13.19□□□□□ -0.3
CHEK2-201ENST00000328354 NLGN4XQ8N0W4 816 aa13.19□□□□□ -0.3
CHEK2-201ENST00000328354 RCBTB1Q8NDN9 531 aa13.19□□□□□ -0.3
CHEK2-201ENST00000328354 ZNF540Q8NDQ6 660 aa13.19□□□□□ -0.3
CHEK2-201ENST00000328354 ZNF420Q8TAQ5 688 aaPredicted RBP13.19□□□□□ -0.3
CHEK2-201ENST00000328354 ACOT11Q8WXI4 607 aaPredicted RBP13.19□□□□□ -0.3
CHEK2-201ENST00000328354 MUL1Q969V5 352 aa13.19□□□□□ -0.3
CHEK2-201ENST00000328354 SLC41A3Q96GZ6 507 aa13.19□□□□□ -0.3
CHEK2-201ENST00000328354 LRRN3Q9H3W5 708 aa13.19□□□□□ -0.3
CHEK2-201ENST00000328354 FKBP14Q9NWM8 211 aa13.19□□□□□ -0.3
CHEK2-201ENST00000328354 IMPAD1Q9NX62 359 aa13.19□□□□□ -0.3
CHEK2-201ENST00000328354 SLC6A14Q9UN76 642 aa13.19□□□□□ -0.3
CHEK2-201ENST00000328354 KMT2EQ8IZD2 1858 aa13.19□□□□□ -0.3
CHEK2-201ENST00000328354 TCRBV16S1A1N1A0A5B0 115 aa13.19□□□□□ -0.3
CHEK2-201ENST00000328354 C17orf105B2RV13 164 aa13.19□□□□□ -0.3
CHEK2-201ENST00000328354 DRD5P21918 477 aa13.19□□□□□ -0.3
CHEK2-201ENST00000328354 DCKP27707 260 aa13.19□□□□□ -0.3
CHEK2-201ENST00000328354 LSM11P83369 360 aaKnown RBP eCLIP13.19□□□□□ -0.3
CHEK2-201ENST00000328354 ZNF141Q15928 474 aa13.19□□□□□ -0.3
CHEK2-201ENST00000328354 CLPPQ16740 277 aaPredicted RBP13.19□□□□□ -0.3
CHEK2-201ENST00000328354 ZSWIM7Q19AV6 140 aa13.19□□□□□ -0.3
CHEK2-201ENST00000328354 TMEM236Q5W0B7 351 aa13.19□□□□□ -0.3
CHEK2-201ENST00000328354 RHBDD2Q6NTF9 364 aa13.19□□□□□ -0.3
CHEK2-201ENST00000328354 B3GNT6Q6ZMB0 384 aa13.19□□□□□ -0.3
CHEK2-201ENST00000328354 PRSS48Q7RTY5 328 aa13.19□□□□□ -0.3
CHEK2-201ENST00000328354 EID2Q8N6I1 236 aa13.19□□□□□ -0.3
CHEK2-201ENST00000328354 ZSCAN1Q8NBB4 408 aa13.19□□□□□ -0.3
CHEK2-201ENST00000328354 OR4N2Q8NGD1 307 aa13.19□□□□□ -0.3
CHEK2-201ENST00000328354 GNPDA2Q8TDQ7 276 aa13.19□□□□□ -0.3
CHEK2-201ENST00000328354 SLC35B4Q969S0 331 aa13.19□□□□□ -0.3
CHEK2-201ENST00000328354 NMD3Q96D46 503 aaKnown RBP13.19□□□□□ -0.3
CHEK2-201ENST00000328354 SENP5Q96HI0 755 aaPredicted RBP13.19□□□□□ -0.3
CHEK2-201ENST00000328354 DOK1Q99704 481 aa13.19□□□□□ -0.3
CHEK2-201ENST00000328354 GPA33Q99795 319 aa13.19□□□□□ -0.3
CHEK2-201ENST00000328354 G6PC3Q9BUM1 346 aa13.19□□□□□ -0.3
CHEK2-201ENST00000328354 YIPF2Q9BWQ6 316 aa13.19□□□□□ -0.3
CHEK2-201ENST00000328354 MKKSQ9NPJ1 570 aaPredicted RBP13.19□□□□□ -0.3
CHEK2-201ENST00000328354 ERVK-18Q9QC07 812 aa13.19□□□□□ -0.3
CHEK2-201ENST00000328354 TESQ9UGI8 421 aaKnown RBP13.19□□□□□ -0.3
CHEK2-201ENST00000328354 PSORS1C1Q9UIG5 152 aa13.19□□□□□ -0.3
CHEK2-201ENST00000328354 NTNG1Q9Y2I2 539 aa13.19□□□□□ -0.3
CHEK2-201ENST00000328354 IGHV5-10-1A0A0J9YXX1 117 aa13.18□□□□□ -0.3
CHEK2-201ENST00000328354 TRAPPC13A5PLN9 417 aa13.18□□□□□ -0.3
CHEK2-201ENST00000328354 SYNDIG1LA6NDD5 238 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms