RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 TCTN2Q96GX1 697 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 SH3YL1Q96HL8 342 aaPredicted RBP7.04□□□□□ -1.28
IFT88-201ENST00000319980 PLEKHA8Q96JA3 519 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 TGM7Q96PF1 710 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 TSSK6Q9BXA6 273 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 POLDIP3Q9BY77 421 aaKnown RBP7.04□□□□□ -1.28
IFT88-201ENST00000319980 SAP130Q9H0E3 1048 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 DCSTAMPQ9H295 470 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 SOHLH2Q9NX45 425 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 ERGIC3Q9Y282 383 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 AQP9O43315 295 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 FOXS1O43638 330 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 CBX7O95931 251 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 CH25HO95992 272 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 RPLP0P05388 317 aaKnown RBP7.04□□□□□ -1.28
IFT88-201ENST00000319980 DBIP07108 87 aaKnown RBP7.04□□□□□ -1.28
IFT88-201ENST00000319980 PIPP12273 146 aaPredicted RBP7.04□□□□□ -1.28
IFT88-201ENST00000319980 IL9P15248 144 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 SERPINB10P48595 397 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 ZNF136P52737 540 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 POU6F2P78424 691 aaPredicted RBP7.04□□□□□ -1.28
IFT88-201ENST00000319980 ZNF155Q12901 538 aaPredicted RBP7.04□□□□□ -1.28
IFT88-201ENST00000319980 TMED1Q13445 227 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 PRTGQ2VWP7 1150 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 SYT14P1Q58G82 188 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 TMEM201Q5SNT2 666 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 NKAIN2Q5VXU1 208 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 GALNT12Q8IXK2 581 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 OR8D4Q8NGM9 314 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 RIT1Q92963 219 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 TMEM80Q96HE8 168 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 STACQ99469 402 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 CHCHD6Q9BRQ6 235 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.04□□□□□ -1.28
IFT88-201ENST00000319980 RNF167Q9H6Y7 350 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 SATB2Q9UPW6 733 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 PMF1-BGLAPU3KQ54 211 aa7.04□□□□□ -1.28
IFT88-201ENST00000319980 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.03□□□□□ -1.28
IFT88-201ENST00000319980 IGHV5-51A0A0C4DH38 117 aa7.03□□□□□ -1.28
IFT88-201ENST00000319980 HRKO00198 91 aa7.03□□□□□ -1.28
IFT88-201ENST00000319980 PIP5K1CO60331 668 aa7.03□□□□□ -1.28
IFT88-201ENST00000319980 APOL3O95236 402 aa7.03□□□□□ -1.28
IFT88-201ENST00000319980 THBS1P07996 1170 aa7.03□□□□□ -1.28
IFT88-201ENST00000319980 RNH1P13489 461 aaKnown RBP7.03□□□□□ -1.28
IFT88-201ENST00000319980 NID1P14543 1247 aa7.03□□□□□ -1.28
IFT88-201ENST00000319980 GNSP15586 552 aa7.03□□□□□ -1.28
IFT88-201ENST00000319980 SSTR4P31391 388 aa7.03□□□□□ -1.28
IFT88-201ENST00000319980 IDUAP35475 653 aa7.03□□□□□ -1.28
IFT88-201ENST00000319980 RPS3AP61247 264 aaKnown RBP7.03□□□□□ -1.28
IFT88-201ENST00000319980 HNRNPKP61978 463 aaKnown RBP eCLIP7.03□□□□□ -1.28
IFT88-201ENST00000319980 BTG2P78543 158 aa7.03□□□□□ -1.28
IFT88-201ENST00000319980 PSG6Q00889 435 aa7.03□□□□□ -1.28
IFT88-201ENST00000319980 DOC2BQ14184 412 aa7.03□□□□□ -1.28
IFT88-201ENST00000319980 OCLNQ16625 522 aa7.03□□□□□ -1.28
IFT88-201ENST00000319980 DECR1Q16698 335 aa7.03□□□□□ -1.28
IFT88-201ENST00000319980 TSTQ16762 297 aaKnown RBP7.03□□□□□ -1.28
IFT88-201ENST00000319980 EIPR1Q53HC9 387 aa7.03□□□□□ -1.28
IFT88-201ENST00000319980 SLC30A6Q6NXT4 461 aa7.03□□□□□ -1.28
IFT88-201ENST00000319980 ZCCHC12Q6PEW1 402 aa7.03□□□□□ -1.28
IFT88-201ENST00000319980 ZNF367Q7RTV3 350 aa7.03□□□□□ -1.28
IFT88-201ENST00000319980 BTLAQ7Z6A9 289 aa7.03□□□□□ -1.28
IFT88-201ENST00000319980 ZAR1Q86SH2 424 aa7.03□□□□□ -1.28
IFT88-201ENST00000319980 RANBP3LQ86VV4 465 aaPredicted RBP7.03□□□□□ -1.28
IFT88-201ENST00000319980 TMCO5AQ8N6Q1 288 aa7.03□□□□□ -1.28
IFT88-201ENST00000319980 CADM4Q8NFZ8 388 aa7.03□□□□□ -1.28
IFT88-201ENST00000319980 FNDC8Q8TC99 324 aa7.03□□□□□ -1.28
IFT88-201ENST00000319980 MMABQ96EY8 250 aaPredicted RBP7.03□□□□□ -1.28
IFT88-201ENST00000319980 CENPOQ9BU64 300 aa7.03□□□□□ -1.28
IFT88-201ENST00000319980 SLIRPQ9GZT3 109 aaKnown RBP7.03□□□□□ -1.28
IFT88-201ENST00000319980 ANKRD19PQ9H560 264 aa7.03□□□□□ -1.28
IFT88-201ENST00000319980 UCKL1Q9NWZ5 548 aa7.03□□□□□ -1.28
IFT88-201ENST00000319980 ABCA7Q8IZY2 2146 aa7.03□□□□□ -1.28
IFT88-201ENST00000319980 LRP4O75096 1905 aa7.03□□□□□ -1.28
IFT88-201ENST00000319980 HYKKA2RU49 373 aa7.03□□□□□ -1.28
IFT88-201ENST00000319980 CDHR4A6H8M9 788 aa7.03□□□□□ -1.28
IFT88-201ENST00000319980 CLDN25C9JDP6 229 aa7.03□□□□□ -1.28
IFT88-201ENST00000319980 TGFBR3LH3BV60 316 aa7.03□□□□□ -1.28
IFT88-201ENST00000319980 KIAA0513O60268 411 aa7.03□□□□□ -1.28
IFT88-201ENST00000319980 BRINP1O60477 761 aa7.03□□□□□ -1.28
IFT88-201ENST00000319980 KCNK2O95069 426 aa7.03□□□□□ -1.28
IFT88-201ENST00000319980 OR5F1O95221 314 aa7.03□□□□□ -1.28
IFT88-201ENST00000319980 SKP1P63208 163 aa7.03□□□□□ -1.28
IFT88-201ENST00000319980 EFNB1P98172 346 aa7.03□□□□□ -1.28
IFT88-201ENST00000319980 NR1D2Q14995 579 aa7.03□□□□□ -1.28
IFT88-201ENST00000319980 NCF4Q15080 339 aa7.03□□□□□ -1.28
IFT88-201ENST00000319980 FLYWCH1Q4VC44 716 aa7.03□□□□□ -1.28
IFT88-201ENST00000319980 EXOSC6Q5RKV6 272 aaKnown RBP7.03□□□□□ -1.28
IFT88-201ENST00000319980 MEDAGQ5VYS4 303 aa7.03□□□□□ -1.28
IFT88-201ENST00000319980 PAQR6Q6TCH4 344 aa7.03□□□□□ -1.28
IFT88-201ENST00000319980 RASSF6Q6ZTQ3 369 aa7.03□□□□□ -1.28
IFT88-201ENST00000319980 MBOAT2Q6ZWT7 520 aa7.03□□□□□ -1.28
IFT88-201ENST00000319980 OR4N2Q8NGD1 307 aa7.03□□□□□ -1.28
IFT88-201ENST00000319980 VMP1Q96GC9 406 aa7.03□□□□□ -1.28
IFT88-201ENST00000319980 ZNF582Q96NG8 517 aaPredicted RBP7.03□□□□□ -1.28
IFT88-201ENST00000319980 MRPS33Q9Y291 106 aaKnown RBP7.03□□□□□ -1.28
IFT88-201ENST00000319980 COL6A3P12111 3177 aa7.02□□□□□ -1.28
IFT88-201ENST00000319980 SYNDIG1LA6NDD5 238 aa7.02□□□□□ -1.29
IFT88-201ENST00000319980 LILRA5A6NI73 299 aa7.02□□□□□ -1.29
IFT88-201ENST00000319980 LMO7DNF2Z398 122 aa7.02□□□□□ -1.29
IFT88-201ENST00000319980 CLDN4O14493 209 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms