RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 ZNF527Q8NB42 609 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 BVESQ8NE79 360 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 OR9A1PQ8NGU1 263 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 FIBINQ8TAL6 211 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 RAB40AQ8WXH6 277 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 PMM1Q92871 262 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 ZNF689Q96CS4 500 aaPredicted RBP4.48□□□□□ -1.69
PTPN13-201ENST00000316707 ABHD1Q96SE0 405 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 FBXL21Q9UKT6 434 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 DOCK1Q14185 1865 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 NUDT19A8MXV4 375 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 PLPP2O43688 288 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 SDC3O75056 442 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 IGFBP1P08833 259 aaPredicted RBP4.48□□□□□ -1.69
PTPN13-201ENST00000316707 ACP5P13686 325 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 GABRA1P14867 456 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 BMP8BP34820 402 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 GDNFP39905 211 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 CBX5P45973 191 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 GCGRP47871 477 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 CAV3P56539 151 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 PSMA6P60900 246 aaKnown RBP4.48□□□□□ -1.69
PTPN13-201ENST00000316707 DBPQ10586 325 aaPredicted RBP4.48□□□□□ -1.69
PTPN13-201ENST00000316707 ZNF155Q12901 538 aaPredicted RBP4.48□□□□□ -1.69
PTPN13-201ENST00000316707 FOXD4Q12950 439 aaPredicted RBP4.48□□□□□ -1.69
PTPN13-201ENST00000316707 MPPED2Q15777 294 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 MAPK14Q16539 360 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 OTOP2Q7RTS6 562 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 BMP8AQ7Z5Y6 402 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 UBE2Q1Q7Z7E8 422 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 ZFP41Q8N8Y5 198 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 MORN4Q8NDC4 146 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 OR51G2Q8NGK0 314 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 OR6K2Q8NGY2 324 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 FCRL4Q96PJ5 515 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 ALG8Q9BVK2 526 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 C1QTNF2Q9BXJ5 285 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 SCPEP1Q9HB40 452 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 TEX10Q9NXF1 929 aaPredicted RBP4.48□□□□□ -1.69
PTPN13-201ENST00000316707 SLCO1C1Q9NYB5 712 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 SLC35A3Q9Y2D2 325 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 IRAK3Q9Y616 596 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 RLFQ13129 1914 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 SMIM30A4D0T7 59 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 ZNF98A6NK75 572 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 FAM227AF5H4B4 570 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 HMGN4O00479 90 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 PRAMEF2O60811 474 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 KRT33AO76009 404 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 TGFB1P01137 390 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 PROS1P07225 676 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 NNMTP40261 264 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 PRLHRP49683 370 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 PRR5P85299 388 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 ILF3Q12906 894 aaKnown RBP eCLIP4.48□□□□□ -1.69
PTPN13-201ENST00000316707 SLC36A2Q495M3 483 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 ZNF620Q6ZNG0 422 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 NUDT18Q6ZVK8 323 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 KRT77Q7Z794 578 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 GPR135Q8IZ08 494 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 RNF113BQ8IZP6 322 aaKnown RBP4.48□□□□□ -1.69
PTPN13-201ENST00000316707 TTLQ8NG68 377 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 OR6T1Q8NGN1 323 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 ZNF461Q8TAF7 563 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 SORCS1Q8WY21 1168 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 PMEPA1Q969W9 287 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 ORAI1Q96D31 301 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 SENP5Q96HI0 755 aaPredicted RBP4.48□□□□□ -1.69
PTPN13-201ENST00000316707 DDOQ99489 341 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 ARL6Q9H0F7 186 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 RGS17Q9UGC6 210 aaPredicted RBP4.48□□□□□ -1.69
PTPN13-201ENST00000316707 SLC6A5Q9Y345 797 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 SLC9B1P1A6NJY1 282 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 FAM25EA8MYX2 175 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 GABARAPH6UMI1 98 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 ACOT7O00154 380 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 IFNGP01579 166 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 CLTBP09497 229 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 EPCAMP16422 314 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 VIPR1P32241 457 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 SLC6A11P48066 632 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 CCR8P51685 355 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 CASP9P55211 416 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 TBPL1P62380 186 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 TGM3Q08188 693 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 PDSS1Q5T2R2 415 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 GLDNQ6ZMI3 551 aaPredicted RBP4.48□□□□□ -1.69
PTPN13-201ENST00000316707 MEPCEQ7L2J0 689 aaKnown RBP4.48□□□□□ -1.69
PTPN13-201ENST00000316707 NLRC3Q7RTR2 1065 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 BCDIN3DQ7Z5W3 292 aaKnown RBP4.48□□□□□ -1.69
PTPN13-201ENST00000316707 RAB42Q8N4Z0 105 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 TTC9BQ8N6N2 239 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 ZNF454Q8N9F8 522 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 ABHD4Q8TB40 342 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 CNOT9Q92600 299 aaKnown RBP4.48□□□□□ -1.69
PTPN13-201ENST00000316707 SLC7A5P2Q9GIP4 190 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 RSPH9Q9H1X1 276 aaPredicted RBP4.48□□□□□ -1.69
PTPN13-201ENST00000316707 ZCCHC4Q9H5U6 513 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 PURGQ9UJV8 347 aaKnown RBP4.48□□□□□ -1.69
PTPN13-201ENST00000316707 CD8B2A6NJW9 211 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms