RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 NOS1APO75052 506 aaPredicted RBP5.8□□□□□ -1.48
PRKDC-201ENST00000314191 PPP1R3DO95685 299 aa5.8□□□□□ -1.48
PRKDC-201ENST00000314191 IGFBP1P08833 259 aaPredicted RBP5.8□□□□□ -1.48
PRKDC-201ENST00000314191 PSKH1P11801 424 aa5.8□□□□□ -1.48
PRKDC-201ENST00000314191 GP1BBP13224 206 aa5.8□□□□□ -1.48
PRKDC-201ENST00000314191 RAB15P59190 212 aa5.8□□□□□ -1.48
PRKDC-201ENST00000314191 KCNJ10P78508 379 aa5.8□□□□□ -1.48
PRKDC-201ENST00000314191 LINC01555Q8NAE3 123 aa5.8□□□□□ -1.48
PRKDC-201ENST00000314191 SLC37A2Q8TED4 501 aa5.8□□□□□ -1.48
PRKDC-201ENST00000314191 MUL1Q969V5 352 aa5.8□□□□□ -1.48
PRKDC-201ENST00000314191 NEURL3Q96EH8 262 aa5.8□□□□□ -1.48
PRKDC-201ENST00000314191 RHNO1Q9BSD3 238 aa5.8□□□□□ -1.48
PRKDC-201ENST00000314191 NT5DC2Q9H857 520 aa5.8□□□□□ -1.48
PRKDC-201ENST00000314191 THSD1Q9NS62 852 aa5.8□□□□□ -1.48
PRKDC-201ENST00000314191 SEMA4GQ9NTN9 838 aa5.8□□□□□ -1.48
PRKDC-201ENST00000314191 PGCP20142 388 aa5.8□□□□□ -1.48
PRKDC-201ENST00000314191 KIAA1024LP59773 190 aa5.8□□□□□ -1.48
PRKDC-201ENST00000314191 TSPAN31Q12999 210 aa5.8□□□□□ -1.48
PRKDC-201ENST00000314191 GAS6Q14393 721 aa5.8□□□□□ -1.48
PRKDC-201ENST00000314191 NUP54Q7Z3B4 507 aa5.8□□□□□ -1.48
PRKDC-201ENST00000314191 ZMYND19Q96E35 227 aaPredicted RBP5.8□□□□□ -1.48
PRKDC-201ENST00000314191 MRGPRX1Q96LB2 322 aa5.8□□□□□ -1.48
PRKDC-201ENST00000314191 SLC22A4Q9H015 551 aa5.8□□□□□ -1.48
PRKDC-201ENST00000314191 PCDHGA6Q9Y5G7 932 aa5.8□□□□□ -1.48
PRKDC-201ENST00000314191 PRAMEF2O60811 474 aa5.8□□□□□ -1.48
PRKDC-201ENST00000314191 SOX3P41225 446 aa5.8□□□□□ -1.48
PRKDC-201ENST00000314191 CSNK1EP49674 416 aaKnown RBP5.8□□□□□ -1.48
PRKDC-201ENST00000314191 SLC35A2P78381 396 aa5.8□□□□□ -1.48
PRKDC-201ENST00000314191 TP53I3Q53FA7 332 aa5.8□□□□□ -1.48
PRKDC-201ENST00000314191 MRPL2Q5T653 305 aaKnown RBP5.8□□□□□ -1.48
PRKDC-201ENST00000314191 CALHM3Q86XJ0 350 aa5.8□□□□□ -1.48
PRKDC-201ENST00000314191 ZNF547Q8IVP9 402 aa5.8□□□□□ -1.48
PRKDC-201ENST00000314191 TBC1D15Q8TC07 691 aa5.8□□□□□ -1.48
PRKDC-201ENST00000314191 TEX101Q9BY14 249 aa5.8□□□□□ -1.48
PRKDC-201ENST00000314191 CAPNS1P04632 268 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 COL9A1P20849 921 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 LIPAP38571 399 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 CSRP3P50461 194 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 ARFIP1P53367 373 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 INAVAQ3KP66 663 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 TMEM64Q6YI46 380 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 CEACAM19Q7Z692 300 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 CHST4Q8NCG5 386 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 MSLNLQ96KJ4 702 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 SLC6A18Q96N87 628 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 ELL3Q9HB65 397 aaPredicted RBP5.79□□□□□ -1.48
PRKDC-201ENST00000314191 OR5K3A6NET4 321 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 ELAVL4P26378 380 aaKnown RBP5.79□□□□□ -1.48
PRKDC-201ENST00000314191 DNASE1L1P49184 302 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 WNT3P56703 355 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 TBCEQ15813 527 aaPredicted RBP5.79□□□□□ -1.48
PRKDC-201ENST00000314191 DAZLQ92904 295 aaKnown RBP5.79□□□□□ -1.48
PRKDC-201ENST00000314191 EXO5Q9H790 373 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 ZNF304Q9HCX3 659 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 ACER3Q9NUN7 267 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 MMP17Q9ULZ9 603 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 PCDHGB1Q9Y5G3 927 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 MYO5AQ9Y4I1 1855 aaKnown RBP5.79□□□□□ -1.48
PRKDC-201ENST00000314191 PLGP00747 810 aaPredicted RBP5.79□□□□□ -1.48
PRKDC-201ENST00000314191 MMP11P24347 488 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 PGGHGQ32M88 737 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 NLRP8Q86W28 1048 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 C10orf111Q8N326 155 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 SPRYD4Q8WW59 207 aaPredicted RBP5.79□□□□□ -1.48
PRKDC-201ENST00000314191 EIF1AYO14602 144 aaKnown RBP5.79□□□□□ -1.48
PRKDC-201ENST00000314191 RLN1P04808 185 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 FUT1P19526 365 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 LPAL2Q16609 132 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 TMPRSS9Q7Z410 1059 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 NSMAFQ92636 917 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 TANKQ92844 425 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 NANSQ9NR45 359 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 FKBP7Q9Y680 259 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 UBE2QL1A1L167 161 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 ZNF701M0R085 212 aaPredicted RBP5.79□□□□□ -1.48
PRKDC-201ENST00000314191 TNFRSF10CO14798 259 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 LIM2P55344 173 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 FAM69BQ5VUD6 431 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 PRICKLE2Q7Z3G6 844 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 A4GALTQ9NPC4 353 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 DAPP1Q9UN19 280 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 DUX1O43812 170 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 FGF17O60258 216 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 ZCCHC12Q6PEW1 402 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 SAMD12Q8N8I0 201 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 C1orf216Q8TAB5 229 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 TMEM163Q8TC26 289 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 SFXN5Q8TD22 340 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 GPER1Q99527 375 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 ING3Q9NXR8 418 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 IQCMA0A1B0GVH7 501 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 SSTR4P31391 388 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 BCAP31P51572 246 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 GPR143P51810 404 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 SAXO2Q658L1 398 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 MEIOBQ8N635 442 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 MR1Q95460 341 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 STUB1Q9UNE7 303 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 MPDZO75970 2070 aa5.79□□□□□ -1.48
PRKDC-201ENST00000314191 C9J4A7 227 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms