RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 COG8Q96MW5 612 aa19.72■□□□□ 0.75
ATG4D-201ENST00000309469 OR1F2PQ96R84 312 aa19.72■□□□□ 0.75
ATG4D-201ENST00000309469 OR10A5Q9H207 317 aa19.72■□□□□ 0.75
ATG4D-201ENST00000309469 C11orf16Q9NQ32 467 aa19.72■□□□□ 0.75
ATG4D-201ENST00000309469 DTX4Q9Y2E6 619 aa19.72■□□□□ 0.75
ATG4D-201ENST00000309469 MMACHCQ9Y4U1 282 aa19.72■□□□□ 0.75
ATG4D-201ENST00000309469 USP34Q70CQ2 3546 aa19.72■□□□□ 0.75
ATG4D-201ENST00000309469 CPED1A4D0V7 1026 aa19.72■□□□□ 0.75
ATG4D-201ENST00000309469 ZNF99A8MXY4 864 aaPredicted RBP19.72■□□□□ 0.75
ATG4D-201ENST00000309469 INMTO95050 263 aa19.72■□□□□ 0.75
ATG4D-201ENST00000309469 GSTM3P21266 225 aa19.72■□□□□ 0.75
ATG4D-201ENST00000309469 MAP2K4P45985 399 aa19.72■□□□□ 0.75
ATG4D-201ENST00000309469 RFX3P48380 749 aa19.72■□□□□ 0.75
ATG4D-201ENST00000309469 DECR1Q16698 335 aa19.72■□□□□ 0.75
ATG4D-201ENST00000309469 GUSBP11Q6P575 273 aa19.72■□□□□ 0.75
ATG4D-201ENST00000309469 NKAIN4Q8IVV8 208 aa19.72■□□□□ 0.75
ATG4D-201ENST00000309469 SVOPQ8N4V2 548 aa19.72■□□□□ 0.75
ATG4D-201ENST00000309469 GGHQ92820 318 aa19.72■□□□□ 0.75
ATG4D-201ENST00000309469 SIGLEC11Q96RL6 698 aa19.72■□□□□ 0.75
ATG4D-201ENST00000309469 NAA50Q9GZZ1 169 aaKnown RBP19.72■□□□□ 0.75
ATG4D-201ENST00000309469 ARMC7Q9H6L4 198 aa19.72■□□□□ 0.75
ATG4D-201ENST00000309469 AMBNQ9NP70 447 aa19.72■□□□□ 0.75
ATG4D-201ENST00000309469 LY6G6EA0A0G2JKS1 128 aa19.71■□□□□ 0.75
ATG4D-201ENST00000309469 CLCA1A8K7I4 914 aa19.71■□□□□ 0.75
ATG4D-201ENST00000309469 TOX3O15405 576 aaPredicted RBP19.71■□□□□ 0.75
ATG4D-201ENST00000309469 SIGLEC6O43699 453 aa19.71■□□□□ 0.75
ATG4D-201ENST00000309469 PRG2P13727 222 aa19.71■□□□□ 0.75
ATG4D-201ENST00000309469 SQSTM1Q13501 440 aa19.71■□□□□ 0.75
ATG4D-201ENST00000309469 C12orf73Q69YU5 71 aa19.71■□□□□ 0.75
ATG4D-201ENST00000309469 NPSR1Q6W5P4 371 aa19.71■□□□□ 0.75
ATG4D-201ENST00000309469 RRM2BQ7LG56 351 aa19.71■□□□□ 0.75
ATG4D-201ENST00000309469 ZNF615Q8N8J6 731 aa19.71■□□□□ 0.75
ATG4D-201ENST00000309469 TOR1AIP2Q8NFQ8 470 aa19.71■□□□□ 0.75
ATG4D-201ENST00000309469 ACOT11Q8WXI4 607 aaPredicted RBP19.71■□□□□ 0.75
ATG4D-201ENST00000309469 RORBQ92753 470 aa19.71■□□□□ 0.75
ATG4D-201ENST00000309469 ZNF501Q96CX3 271 aaPredicted RBP19.71■□□□□ 0.75
ATG4D-201ENST00000309469 COPS4Q9BT78 406 aa19.71■□□□□ 0.75
ATG4D-201ENST00000309469 FGF21Q9NSA1 209 aa19.71■□□□□ 0.75
ATG4D-201ENST00000309469 FKBP14Q9NWM8 211 aa19.71■□□□□ 0.75
ATG4D-201ENST00000309469 U3KQA8 63 aa19.71■□□□□ 0.75
ATG4D-201ENST00000309469 IGKV1D-16P01601 117 aa19.7■□□□□ 0.74
ATG4D-201ENST00000309469 MASP1P48740 699 aa19.7■□□□□ 0.74
ATG4D-201ENST00000309469 RNF144AP50876 292 aaPredicted RBP19.7■□□□□ 0.74
ATG4D-201ENST00000309469 NUDT6P53370 316 aa19.7■□□□□ 0.74
ATG4D-201ENST00000309469 TMBIM6P55061 237 aa19.7■□□□□ 0.74
ATG4D-201ENST00000309469 GP2P55259 537 aaKnown RBP19.7■□□□□ 0.74
ATG4D-201ENST00000309469 DSG2Q14126 1118 aa19.7■□□□□ 0.74
ATG4D-201ENST00000309469 RCBTB1Q8NDN9 531 aa19.7■□□□□ 0.74
ATG4D-201ENST00000309469 C16orf52Q8NHV5 167 aa19.7■□□□□ 0.74
ATG4D-201ENST00000309469 MYDGFQ969H8 173 aa19.7■□□□□ 0.74
ATG4D-201ENST00000309469 POLR2J2Q9GZM3 115 aaKnown RBP19.7■□□□□ 0.74
ATG4D-201ENST00000309469 ZNF304Q9HCX3 659 aa19.7■□□□□ 0.74
ATG4D-201ENST00000309469 Q9N2J8 555 aa19.7■□□□□ 0.74
ATG4D-201ENST00000309469 ATXN7L1Q9ULK2 861 aaPredicted RBP19.7■□□□□ 0.74
ATG4D-201ENST00000309469 SH3D21A4FU49 640 aa19.7■□□□□ 0.74
ATG4D-201ENST00000309469 DSCR3O14972 297 aa19.7■□□□□ 0.74
ATG4D-201ENST00000309469 ATE1O95260 518 aa19.7■□□□□ 0.74
ATG4D-201ENST00000309469 NTN1O95631 604 aa19.7■□□□□ 0.74
ATG4D-201ENST00000309469 CFIP05156 583 aa19.7■□□□□ 0.74
ATG4D-201ENST00000309469 GKN3PP0CG01 181 aa19.7■□□□□ 0.74
ATG4D-201ENST00000309469 MVKQ03426 396 aa19.7■□□□□ 0.74
ATG4D-201ENST00000309469 PERM1Q5SV97 790 aa19.7■□□□□ 0.74
ATG4D-201ENST00000309469 YOD1Q5VVQ6 348 aaPredicted RBP19.7■□□□□ 0.74
ATG4D-201ENST00000309469 ZNF574Q6ZN55 896 aaPredicted RBP19.7■□□□□ 0.74
ATG4D-201ENST00000309469 TMPRSS9Q7Z410 1059 aa19.7■□□□□ 0.74
ATG4D-201ENST00000309469 PIGXQ8TBF5 258 aa19.7■□□□□ 0.74
ATG4D-201ENST00000309469 ACOT13Q9NPJ3 140 aa19.7■□□□□ 0.74
ATG4D-201ENST00000309469 CLN6Q9NWW5 311 aa19.7■□□□□ 0.74
ATG4D-201ENST00000309469 SLC7A7Q9UM01 511 aa19.7■□□□□ 0.74
ATG4D-201ENST00000309469 C17orf105B2RV13 164 aa19.69■□□□□ 0.74
ATG4D-201ENST00000309469 FADS2O95864 444 aaKnown RBP19.69■□□□□ 0.74
ATG4D-201ENST00000309469 CLPSP04118 112 aa19.69■□□□□ 0.74
ATG4D-201ENST00000309469 CT45A8P0DMV1 189 aa19.69■□□□□ 0.74
ATG4D-201ENST00000309469 CT45A9P0DMV2 189 aa19.69■□□□□ 0.74
ATG4D-201ENST00000309469 OMPP47874 163 aa19.69■□□□□ 0.74
ATG4D-201ENST00000309469 SNRPGP62308 76 aaKnown RBP19.69■□□□□ 0.74
ATG4D-201ENST00000309469 TSPAN31Q12999 210 aa19.69■□□□□ 0.74
ATG4D-201ENST00000309469 CT45A2Q5DJT8 189 aa19.69■□□□□ 0.74
ATG4D-201ENST00000309469 MFSD4BQ5TF39 518 aa19.69■□□□□ 0.74
ATG4D-201ENST00000309469 PEAR1Q5VY43 1037 aaPredicted RBP19.69■□□□□ 0.74
ATG4D-201ENST00000309469 CASP12Q6UXS9 341 aa19.69■□□□□ 0.74
ATG4D-201ENST00000309469 CCDC81Q6ZN84 652 aa19.69■□□□□ 0.74
ATG4D-201ENST00000309469 MEX3DQ86XN8 651 aaKnown RBP19.69■□□□□ 0.74
ATG4D-201ENST00000309469 OR7G1Q8NGA0 311 aa19.69■□□□□ 0.74
ATG4D-201ENST00000309469 PTPMT1Q8WUK0 201 aaPredicted RBP19.69■□□□□ 0.74
ATG4D-201ENST00000309469 TRUB1Q8WWH5 349 aaKnown RBP19.69■□□□□ 0.74
ATG4D-201ENST00000309469 DPYSL5Q9BPU6 564 aa19.69■□□□□ 0.74
ATG4D-201ENST00000309469 GAREM1Q9H706 876 aa19.69■□□□□ 0.74
ATG4D-201ENST00000309469 WARS2Q9UGM6 360 aaKnown RBP19.69■□□□□ 0.74
ATG4D-201ENST00000309469 TRAPPC13A5PLN9 417 aa19.68■□□□□ 0.74
ATG4D-201ENST00000309469 TTC36A6NLP5 189 aa19.68■□□□□ 0.74
ATG4D-201ENST00000309469 FMO6PO60774 539 aa19.68■□□□□ 0.74
ATG4D-201ENST00000309469 BCAS1O75363 584 aaPredicted RBP19.68■□□□□ 0.74
ATG4D-201ENST00000309469 DRD5P21918 477 aa19.68■□□□□ 0.74
ATG4D-201ENST00000309469 FBLP22087 321 aaKnown RBP19.68■□□□□ 0.74
ATG4D-201ENST00000309469 CALRP27797 417 aaKnown RBP19.68■□□□□ 0.74
ATG4D-201ENST00000309469 HTR2AP28223 471 aa19.68■□□□□ 0.74
ATG4D-201ENST00000309469 GIPRP48546 466 aa19.68■□□□□ 0.74
ATG4D-201ENST00000309469 PDZK1Q5T2W1 519 aa19.68■□□□□ 0.74
ATG4D-201ENST00000309469 QSOX2Q6ZRP7 698 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms