RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 HNRNPCL1O60812 293 aaKnown RBP16.39■□□□□ 0.21
SSSCA1-201ENST00000309328 TRIM3O75382 744 aaPredicted RBP16.39■□□□□ 0.21
SSSCA1-201ENST00000309328 TNFRSF21O75509 655 aa16.39■□□□□ 0.21
SSSCA1-201ENST00000309328 H6PDO95479 791 aa16.39■□□□□ 0.21
SSSCA1-201ENST00000309328 OXSR1O95747 527 aaPredicted RBP16.39■□□□□ 0.21
SSSCA1-201ENST00000309328 TFPTP0C1Z6 253 aa16.39■□□□□ 0.21
SSSCA1-201ENST00000309328 HNRNPCL4P0DMR1 293 aa16.39■□□□□ 0.21
SSSCA1-201ENST00000309328 DCTP40126 519 aa16.39■□□□□ 0.21
SSSCA1-201ENST00000309328 NUDT2P50583 147 aa16.39■□□□□ 0.21
SSSCA1-201ENST00000309328 C17orf67Q0P5P2 114 aa16.39■□□□□ 0.21
SSSCA1-201ENST00000309328 CYP51A1Q16850 503 aa16.39■□□□□ 0.21
SSSCA1-201ENST00000309328 GRAMD1BQ3KR37 738 aa16.39■□□□□ 0.21
SSSCA1-201ENST00000309328 CCNJQ5T5M9 372 aa16.39■□□□□ 0.21
SSSCA1-201ENST00000309328 PRAMEF20Q5VT98 475 aa16.39■□□□□ 0.21
SSSCA1-201ENST00000309328 TRPM8Q7Z2W7 1104 aa16.39■□□□□ 0.21
SSSCA1-201ENST00000309328 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.39■□□□□ 0.21
SSSCA1-201ENST00000309328 C11orf65Q8NCR3 313 aa16.39■□□□□ 0.21
SSSCA1-201ENST00000309328 ECSITQ9BQ95 431 aa16.39■□□□□ 0.21
SSSCA1-201ENST00000309328 HES7Q9BYE0 225 aa16.39■□□□□ 0.21
SSSCA1-201ENST00000309328 BCL2L10Q9HD36 194 aa16.39■□□□□ 0.21
SSSCA1-201ENST00000309328 KCNE3Q9Y6H6 103 aa16.39■□□□□ 0.21
SSSCA1-201ENST00000309328 NUP214P35658 2090 aaPredicted RBP16.38■□□□□ 0.21
SSSCA1-201ENST00000309328 NPIPB9F8W1W9 429 aa16.38■□□□□ 0.21
SSSCA1-201ENST00000309328 SNPHO15079 494 aa16.38■□□□□ 0.21
SSSCA1-201ENST00000309328 ARAFP10398 606 aa16.38■□□□□ 0.21
SSSCA1-201ENST00000309328 ESRRAP11474 423 aaPredicted RBP16.38■□□□□ 0.21
SSSCA1-201ENST00000309328 CALB2P22676 271 aa16.38■□□□□ 0.21
SSSCA1-201ENST00000309328 SLC6A2P23975 617 aa16.38■□□□□ 0.21
SSSCA1-201ENST00000309328 MSX1P28360 303 aa16.38■□□□□ 0.21
SSSCA1-201ENST00000309328 ST13P50502 369 aaKnown RBP16.38■□□□□ 0.21
SSSCA1-201ENST00000309328 CASP9P55211 416 aa16.38■□□□□ 0.21
SSSCA1-201ENST00000309328 GPR85P60893 370 aa16.38■□□□□ 0.21
SSSCA1-201ENST00000309328 PLGLB1Q02325 96 aa16.38■□□□□ 0.21
SSSCA1-201ENST00000309328 ZNF141Q15928 474 aa16.38■□□□□ 0.21
SSSCA1-201ENST00000309328 INTS11Q5TA45 600 aaKnown RBP16.38■□□□□ 0.21
SSSCA1-201ENST00000309328 TYW3Q6IPR3 259 aaKnown RBP16.38■□□□□ 0.21
SSSCA1-201ENST00000309328 ERICH5Q6P6B1 374 aa16.38■□□□□ 0.21
SSSCA1-201ENST00000309328 NET1Q7Z628 596 aaPredicted RBP16.38■□□□□ 0.21
SSSCA1-201ENST00000309328 KRT73Q86Y46 540 aa16.38■□□□□ 0.21
SSSCA1-201ENST00000309328 CMIPQ8IY22 773 aa16.38■□□□□ 0.21
SSSCA1-201ENST00000309328 OR1J4Q8NGS1 313 aa16.38■□□□□ 0.21
SSSCA1-201ENST00000309328 BBS10Q8TAM1 723 aa16.38■□□□□ 0.21
SSSCA1-201ENST00000309328 SLC38A5Q8WUX1 472 aa16.38■□□□□ 0.21
SSSCA1-201ENST00000309328 BARD1Q99728 777 aaKnown RBP16.38■□□□□ 0.21
SSSCA1-201ENST00000309328 GPATCH1Q9BRR8 931 aaKnown RBP16.38■□□□□ 0.21
SSSCA1-201ENST00000309328 ARMC7Q9H6L4 198 aa16.38■□□□□ 0.21
SSSCA1-201ENST00000309328 DEPPQ9NTK1 212 aa16.38■□□□□ 0.21
SSSCA1-201ENST00000309328 PPP4R1LQ9P1A2 415 aa16.38■□□□□ 0.21
SSSCA1-201ENST00000309328 PRDM4Q9UKN5 801 aa16.38■□□□□ 0.21
SSSCA1-201ENST00000309328 ANGPT4Q9Y264 503 aa16.38■□□□□ 0.21
SSSCA1-201ENST00000309328 L3MBTL1Q9Y468 752 aa16.38■□□□□ 0.21
SSSCA1-201ENST00000309328 DTNAQ9Y4J8 743 aa16.38■□□□□ 0.21
SSSCA1-201ENST00000309328 IGLV3-32A0A0A0MS00 114 aa16.37■□□□□ 0.21
SSSCA1-201ENST00000309328 NDUFB5O43674 189 aa16.37■□□□□ 0.21
SSSCA1-201ENST00000309328 CBR3O75828 277 aa16.37■□□□□ 0.21
SSSCA1-201ENST00000309328 PDE9AO76083 593 aa16.37■□□□□ 0.21
SSSCA1-201ENST00000309328 GLSO94925 669 aaPredicted RBP16.37■□□□□ 0.21
SSSCA1-201ENST00000309328 ETS2P15036 469 aa16.37■□□□□ 0.21
SSSCA1-201ENST00000309328 ADH7P40394 386 aa16.37■□□□□ 0.21
SSSCA1-201ENST00000309328 DNASE1L1P49184 302 aa16.37■□□□□ 0.21
SSSCA1-201ENST00000309328 MTPNP58546 118 aa16.37■□□□□ 0.21
SSSCA1-201ENST00000309328 CDK6Q00534 326 aa16.37■□□□□ 0.21
SSSCA1-201ENST00000309328 ALDH6A1Q02252 535 aaKnown RBP16.37■□□□□ 0.21
SSSCA1-201ENST00000309328 FUT5Q11128 374 aa16.37■□□□□ 0.21
SSSCA1-201ENST00000309328 FOXO1Q12778 655 aa16.37■□□□□ 0.21
SSSCA1-201ENST00000309328 CAPRIN1Q14444 709 aaKnown RBP16.37■□□□□ 0.21
SSSCA1-201ENST00000309328 GANABQ14697 944 aaKnown RBP16.37■□□□□ 0.21
SSSCA1-201ENST00000309328 INPP5JQ15735 1006 aaPredicted RBP16.37■□□□□ 0.21
SSSCA1-201ENST00000309328 KLHL26Q53HC5 615 aa16.37■□□□□ 0.21
SSSCA1-201ENST00000309328 KRTCAP3Q53RY4 240 aa16.37■□□□□ 0.21
SSSCA1-201ENST00000309328 TIGD3Q6B0B8 471 aa16.37■□□□□ 0.21
SSSCA1-201ENST00000309328 REEP3Q6NUK4 255 aa16.37■□□□□ 0.21
SSSCA1-201ENST00000309328 FRRS1Q6ZNA5 592 aa16.37■□□□□ 0.21
SSSCA1-201ENST00000309328 PEX5LQ8IYB4 626 aa16.37■□□□□ 0.21
SSSCA1-201ENST00000309328 FAM109AQ8N4B1 249 aa16.37■□□□□ 0.21
SSSCA1-201ENST00000309328 BHLHE22Q8NFJ8 381 aaPredicted RBP16.37■□□□□ 0.21
SSSCA1-201ENST00000309328 OR4C3Q8NH37 302 aa16.37■□□□□ 0.21
SSSCA1-201ENST00000309328 FAR1Q8WVX9 515 aa16.37■□□□□ 0.21
SSSCA1-201ENST00000309328 REXO5Q96IC2 774 aaKnown RBP16.37■□□□□ 0.21
SSSCA1-201ENST00000309328 NSL1Q96IY1 281 aa16.37■□□□□ 0.21
SSSCA1-201ENST00000309328 TREX2Q9BQ50 279 aaPredicted RBP16.37■□□□□ 0.21
SSSCA1-201ENST00000309328 SPATA5L1Q9BVQ7 753 aa16.37■□□□□ 0.21
SSSCA1-201ENST00000309328 TTTY12Q9BZ98 90 aa16.37■□□□□ 0.21
SSSCA1-201ENST00000309328 PTGES2Q9H7Z7 377 aa16.37■□□□□ 0.21
SSSCA1-201ENST00000309328 PROK2Q9HC23 129 aa16.37■□□□□ 0.21
SSSCA1-201ENST00000309328 SPAG4Q9NPE6 437 aa16.37■□□□□ 0.21
SSSCA1-201ENST00000309328 OLAHQ9NV23 265 aa16.37■□□□□ 0.21
SSSCA1-201ENST00000309328 SLC35A3Q9Y2D2 325 aa16.37■□□□□ 0.21
SSSCA1-201ENST00000309328 IFT52Q9Y366 437 aa16.37■□□□□ 0.21
SSSCA1-201ENST00000309328 COL6A6A6NMZ7 2263 aa16.36■□□□□ 0.21
SSSCA1-201ENST00000309328 TFECO14948 347 aaPredicted RBP16.36■□□□□ 0.21
SSSCA1-201ENST00000309328 ANGPTL1O95841 491 aa16.36■□□□□ 0.21
SSSCA1-201ENST00000309328 BCHEP06276 602 aa16.36■□□□□ 0.21
SSSCA1-201ENST00000309328 DBIP07108 87 aaKnown RBP16.36■□□□□ 0.21
SSSCA1-201ENST00000309328 PTGDSP41222 190 aa16.36■□□□□ 0.21
SSSCA1-201ENST00000309328 GAS1P54826 345 aa16.36■□□□□ 0.21
SSSCA1-201ENST00000309328 C19orf57Q0VDD7 668 aa16.36■□□□□ 0.21
SSSCA1-201ENST00000309328 GPR68Q15743 365 aa16.36■□□□□ 0.21
SSSCA1-201ENST00000309328 SYPL1Q16563 259 aa16.36■□□□□ 0.21
SSSCA1-201ENST00000309328 SPATS1Q496A3 300 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms