RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 TCEA1P23193 301 aaKnown RBP17.92■□□□□ 0.46
PDZRN3-202ENST00000308537 HPCAL1P37235 193 aa17.92■□□□□ 0.46
PDZRN3-202ENST00000308537 RFX3P48380 749 aa17.92■□□□□ 0.46
PDZRN3-202ENST00000308537 ASCL1P50553 236 aa17.92■□□□□ 0.46
PDZRN3-202ENST00000308537 PRKAG1P54619 331 aa17.92■□□□□ 0.46
PDZRN3-202ENST00000308537 ABCE1P61221 599 aaKnown RBP17.92■□□□□ 0.46
PDZRN3-202ENST00000308537 EMX2Q04743 252 aa17.92■□□□□ 0.46
PDZRN3-202ENST00000308537 SRYQ05066 204 aa17.92■□□□□ 0.46
PDZRN3-202ENST00000308537 STX5Q13190 355 aa17.92■□□□□ 0.46
PDZRN3-202ENST00000308537 SF3B4Q15427 424 aaKnown RBP eCLIP17.92■□□□□ 0.46
PDZRN3-202ENST00000308537 BCL2A1Q16548 175 aa17.92■□□□□ 0.46
PDZRN3-202ENST00000308537 ZCCHC12Q6PEW1 402 aa17.92■□□□□ 0.46
PDZRN3-202ENST00000308537 CAMKMTQ7Z624 323 aa17.92■□□□□ 0.46
PDZRN3-202ENST00000308537 FNDC5Q8NAU1 212 aa17.92■□□□□ 0.46
PDZRN3-202ENST00000308537 OR4K17Q8NGC6 315 aa17.92■□□□□ 0.46
PDZRN3-202ENST00000308537 SLC9A6Q92581 669 aa17.92■□□□□ 0.46
PDZRN3-202ENST00000308537 TUBGCP3Q96CW5 907 aa17.92■□□□□ 0.46
PDZRN3-202ENST00000308537 C1GALT1C1Q96EU7 318 aa17.92■□□□□ 0.46
PDZRN3-202ENST00000308537 C3orf14Q9HBI5 128 aa17.92■□□□□ 0.46
PDZRN3-202ENST00000308537 DKKL1Q9UK85 242 aa17.92■□□□□ 0.46
PDZRN3-202ENST00000308537 A0A1W2PRB8 838 aa17.91■□□□□ 0.46
PDZRN3-202ENST00000308537 H0YC42 278 aa17.91■□□□□ 0.46
PDZRN3-202ENST00000308537 ANKRD28O15084 1053 aa17.91■□□□□ 0.46
PDZRN3-202ENST00000308537 ERLIN1O75477 346 aa17.91■□□□□ 0.46
PDZRN3-202ENST00000308537 RCBTB2O95199 551 aa17.91■□□□□ 0.46
PDZRN3-202ENST00000308537 KCNH1O95259 989 aa17.91■□□□□ 0.46
PDZRN3-202ENST00000308537 OXSR1O95747 527 aaPredicted RBP17.91■□□□□ 0.46
PDZRN3-202ENST00000308537 HSPA4LO95757 839 aa17.91■□□□□ 0.46
PDZRN3-202ENST00000308537 ANGPTL1O95841 491 aa17.91■□□□□ 0.46
PDZRN3-202ENST00000308537 TGM6O95932 706 aa17.91■□□□□ 0.46
PDZRN3-202ENST00000308537 BGNP21810 368 aa17.91■□□□□ 0.46
PDZRN3-202ENST00000308537 CTSSP25774 331 aa17.91■□□□□ 0.46
PDZRN3-202ENST00000308537 AGFG1P52594 562 aaKnown RBP17.91■□□□□ 0.46
PDZRN3-202ENST00000308537 SUCLG1P53597 346 aaKnown RBP17.91■□□□□ 0.46
PDZRN3-202ENST00000308537 PSMD4P55036 377 aaKnown RBP17.91■□□□□ 0.46
PDZRN3-202ENST00000308537 TPD52P55327 224 aaPredicted RBP17.91■□□□□ 0.46
PDZRN3-202ENST00000308537 WDR4P57081 412 aaKnown RBP17.91■□□□□ 0.46
PDZRN3-202ENST00000308537 AAGABQ6PD74 315 aa17.91■□□□□ 0.46
PDZRN3-202ENST00000308537 FIGNL1Q6PIW4 674 aa17.91■□□□□ 0.46
PDZRN3-202ENST00000308537 ARSKQ6UWY0 536 aa17.91■□□□□ 0.46
PDZRN3-202ENST00000308537 CROCCP2Q86T23 111 aa17.91■□□□□ 0.46
PDZRN3-202ENST00000308537 OR5P2Q8WZ92 322 aa17.91■□□□□ 0.46
PDZRN3-202ENST00000308537 RNASE6Q93091 150 aaKnown RBP17.91■□□□□ 0.46
PDZRN3-202ENST00000308537 NPAS1Q99742 590 aa17.91■□□□□ 0.46
PDZRN3-202ENST00000308537 YIPF4Q9BSR8 244 aa17.91■□□□□ 0.46
PDZRN3-202ENST00000308537 AKTIPQ9H8T0 292 aa17.91■□□□□ 0.46
PDZRN3-202ENST00000308537 MRTO4Q9UKD2 239 aaKnown RBP17.91■□□□□ 0.46
PDZRN3-202ENST00000308537 RAP2CQ9Y3L5 183 aa17.91■□□□□ 0.46
PDZRN3-202ENST00000308537 ZNF337Q9Y3M9 751 aa17.91■□□□□ 0.46
PDZRN3-202ENST00000308537 HEATR5AQ86XA9 2040 aa17.91■□□□□ 0.46
PDZRN3-202ENST00000308537 OR2M5A3KFT3 312 aa17.9■□□□□ 0.46
PDZRN3-202ENST00000308537 H0Y3Z8 333 aa17.9■□□□□ 0.46
PDZRN3-202ENST00000308537 SCN2BO60939 215 aa17.9■□□□□ 0.46
PDZRN3-202ENST00000308537 C6orf47O95873 294 aa17.9■□□□□ 0.46
PDZRN3-202ENST00000308537 CAPN3P20807 821 aa17.9■□□□□ 0.46
PDZRN3-202ENST00000308537 TBXA2RP21731 343 aa17.9■□□□□ 0.46
PDZRN3-202ENST00000308537 RPL3P39023 403 aaKnown RBP17.9■□□□□ 0.46
PDZRN3-202ENST00000308537 CLDN8P56748 225 aa17.9■□□□□ 0.46
PDZRN3-202ENST00000308537 RCAN2Q14206 197 aa17.9■□□□□ 0.46
PDZRN3-202ENST00000308537 GANABQ14697 944 aaKnown RBP17.9■□□□□ 0.46
PDZRN3-202ENST00000308537 LASP1Q14847 261 aaKnown RBP17.9■□□□□ 0.46
PDZRN3-202ENST00000308537 TESK1Q15569 626 aa17.9■□□□□ 0.46
PDZRN3-202ENST00000308537 PDCD2Q16342 344 aaPredicted RBP17.9■□□□□ 0.46
PDZRN3-202ENST00000308537 SMU1Q2TAY7 513 aa17.9■□□□□ 0.46
PDZRN3-202ENST00000308537 VPS26BQ4G0F5 336 aa17.9■□□□□ 0.46
PDZRN3-202ENST00000308537 CPTPQ5TA50 214 aa17.9■□□□□ 0.46
PDZRN3-202ENST00000308537 OR5M1Q8NGP8 315 aa17.9■□□□□ 0.46
PDZRN3-202ENST00000308537 WNT2BQ93097 391 aa17.9■□□□□ 0.46
PDZRN3-202ENST00000308537 BHLHE41Q9C0J9 482 aaPredicted RBP17.9■□□□□ 0.46
PDZRN3-202ENST00000308537 SERHL2Q9H4I8 314 aa17.9■□□□□ 0.46
PDZRN3-202ENST00000308537 DUSP22Q9NRW4 184 aa17.9■□□□□ 0.46
PDZRN3-202ENST00000308537 ZCCHC3Q9NUD5 404 aaKnown RBP17.9■□□□□ 0.46
PDZRN3-202ENST00000308537 GIN1Q9NXP7 522 aa17.9■□□□□ 0.46
PDZRN3-202ENST00000308537 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.9■□□□□ 0.46
PDZRN3-202ENST00000308537 KCNE3Q9Y6H6 103 aa17.9■□□□□ 0.46
PDZRN3-202ENST00000308537 ZNF469Q96JG9 3925 aaPredicted RBP17.89■□□□□ 0.45
PDZRN3-202ENST00000308537 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.89■□□□□ 0.45
PDZRN3-202ENST00000308537 TNFSF13O75888 250 aa17.89■□□□□ 0.45
PDZRN3-202ENST00000308537 ZWINTO95229 277 aa17.89■□□□□ 0.45
PDZRN3-202ENST00000308537 TMIGD3P0DMS9 266 aaPredicted RBP17.89■□□□□ 0.45
PDZRN3-202ENST00000308537 HK1P19367 917 aa17.89■□□□□ 0.45
PDZRN3-202ENST00000308537 PRPS1L1P21108 318 aa17.89■□□□□ 0.45
PDZRN3-202ENST00000308537 PSMA4P25789 261 aaKnown RBP17.89■□□□□ 0.45
PDZRN3-202ENST00000308537 GCKP35557 465 aa17.89■□□□□ 0.45
PDZRN3-202ENST00000308537 SLC1A6P48664 564 aa17.89■□□□□ 0.45
PDZRN3-202ENST00000308537 CLDN20P56880 219 aa17.89■□□□□ 0.45
PDZRN3-202ENST00000308537 HBA1P69905 142 aa17.89■□□□□ 0.45
PDZRN3-202ENST00000308537 PHC1P78364 1004 aa17.89■□□□□ 0.45
PDZRN3-202ENST00000308537 C17orf67Q0P5P2 114 aa17.89■□□□□ 0.45
PDZRN3-202ENST00000308537 BST1Q10588 318 aa17.89■□□□□ 0.45
PDZRN3-202ENST00000308537 CD226Q15762 336 aa17.89■□□□□ 0.45
PDZRN3-202ENST00000308537 CCNJQ5T5M9 372 aa17.89■□□□□ 0.45
PDZRN3-202ENST00000308537 CDC73Q6P1J9 531 aa17.89■□□□□ 0.45
PDZRN3-202ENST00000308537 STACQ99469 402 aa17.89■□□□□ 0.45
PDZRN3-202ENST00000308537 PIGUQ9H490 435 aa17.89■□□□□ 0.45
PDZRN3-202ENST00000308537 SDHAF3Q9NRP4 125 aa17.89■□□□□ 0.45
PDZRN3-202ENST00000308537 CRIM1Q9NZV1 1036 aa17.89■□□□□ 0.45
PDZRN3-202ENST00000308537 SHISA8B8ZZ34 492 aa17.88■□□□□ 0.45
PDZRN3-202ENST00000308537 NPIPB9F8W1W9 429 aa17.88■□□□□ 0.45
PDZRN3-202ENST00000308537 ALOX5P09917 674 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms