RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 TRPS1Q9UHF7 1281 aa15.21■□□□□ 0.03
CCDC8-201ENST00000307522 PFDN2Q9UHV9 154 aa15.21■□□□□ 0.03
CCDC8-201ENST00000307522 PTHLHP12272 177 aa15.21■□□□□ 0.02
CCDC8-201ENST00000307522 DGKGP49619 791 aa15.21■□□□□ 0.02
CCDC8-201ENST00000307522 VEGFCP49767 419 aa15.21■□□□□ 0.02
CCDC8-201ENST00000307522 MEF2AQ02078 507 aaPredicted RBP15.21■□□□□ 0.02
CCDC8-201ENST00000307522 CDKN3Q16667 212 aa15.21■□□□□ 0.02
CCDC8-201ENST00000307522 TMEM31Q5JXX7 168 aa15.21■□□□□ 0.02
CCDC8-201ENST00000307522 FRG2Q64ET8 278 aa15.21■□□□□ 0.02
CCDC8-201ENST00000307522 TOMM5Q8N4H5 51 aa15.21■□□□□ 0.02
CCDC8-201ENST00000307522 KIAA1143Q96AT1 154 aaPredicted RBP15.21■□□□□ 0.02
CCDC8-201ENST00000307522 FRG2BQ96QU4 278 aa15.21■□□□□ 0.02
CCDC8-201ENST00000307522 PLA2G12AQ9BZM1 189 aa15.21■□□□□ 0.02
CCDC8-201ENST00000307522 ACTR10Q9NZ32 417 aa15.21■□□□□ 0.02
CCDC8-201ENST00000307522 PLAGL1Q9UM63 463 aa15.21■□□□□ 0.02
CCDC8-201ENST00000307522 SPTBP11277 2137 aa15.2■□□□□ 0.02
CCDC8-201ENST00000307522 OR6C74A6NCV1 312 aa15.2■□□□□ 0.02
CCDC8-201ENST00000307522 SGK494L7N484 410 aa15.2■□□□□ 0.02
CCDC8-201ENST00000307522 LINC01565O15544 149 aa15.2■□□□□ 0.02
CCDC8-201ENST00000307522 IGF2P01344 180 aa15.2■□□□□ 0.02
CCDC8-201ENST00000307522 IFNW1P05000 195 aa15.2■□□□□ 0.02
CCDC8-201ENST00000307522 OSMP13725 252 aa15.2■□□□□ 0.02
CCDC8-201ENST00000307522 SHC1P29353 583 aa15.2■□□□□ 0.02
CCDC8-201ENST00000307522 GPM6BQ13491 265 aa15.2■□□□□ 0.02
CCDC8-201ENST00000307522 DOC2AQ14183 400 aa15.2■□□□□ 0.02
CCDC8-201ENST00000307522 RBMS2Q15434 407 aaKnown RBP15.2■□□□□ 0.02
CCDC8-201ENST00000307522 WDR20Q8TBZ3 569 aa15.2■□□□□ 0.02
CCDC8-201ENST00000307522 ZNF582Q96NG8 517 aaPredicted RBP15.2■□□□□ 0.02
CCDC8-201ENST00000307522 SAMD11Q96NU1 681 aa15.2■□□□□ 0.02
CCDC8-201ENST00000307522 SLC38A2Q96QD8 506 aa15.2■□□□□ 0.02
CCDC8-201ENST00000307522 GPA33Q99795 319 aa15.2■□□□□ 0.02
CCDC8-201ENST00000307522 AUNIPQ9H7T9 357 aa15.2■□□□□ 0.02
CCDC8-201ENST00000307522 EVA1AQ9H8M9 152 aa15.2■□□□□ 0.02
CCDC8-201ENST00000307522 DMDP11532 3685 aa15.2■□□□□ 0.02
CCDC8-201ENST00000307522 ZC3H12DA2A288 527 aaKnown RBP15.2■□□□□ 0.02
CCDC8-201ENST00000307522 MGAT4DA6NG13 374 aa15.2■□□□□ 0.02
CCDC8-201ENST00000307522 PRSS44E7EML9 344 aa15.2■□□□□ 0.02
CCDC8-201ENST00000307522 PRR23D1E9PI22 279 aaPredicted RBP15.2■□□□□ 0.02
CCDC8-201ENST00000307522 TSPAN6O43657 245 aa15.2■□□□□ 0.02
CCDC8-201ENST00000307522 POP4O95707 220 aaKnown RBP15.2■□□□□ 0.02
CCDC8-201ENST00000307522 RECKO95980 971 aa15.2■□□□□ 0.02
CCDC8-201ENST00000307522 WNT1P04628 370 aa15.2■□□□□ 0.02
CCDC8-201ENST00000307522 H2AFB2P0C5Z0 115 aa15.2■□□□□ 0.02
CCDC8-201ENST00000307522 PRR23D2P0DMB1 279 aaPredicted RBP15.2■□□□□ 0.02
CCDC8-201ENST00000307522 NHLRC3Q5JS37 347 aa15.2■□□□□ 0.02
CCDC8-201ENST00000307522 GCNT6Q5T4J0 391 aa15.2■□□□□ 0.02
CCDC8-201ENST00000307522 RGS7BPQ6MZT1 257 aaPredicted RBP15.2■□□□□ 0.02
CCDC8-201ENST00000307522 ZNF436Q9C0F3 470 aaPredicted RBP15.2■□□□□ 0.02
CCDC8-201ENST00000307522 F8W036 122 aa15.19■□□□□ 0.02
CCDC8-201ENST00000307522 ZNF593O00488 134 aaPredicted RBP15.19■□□□□ 0.02
CCDC8-201ENST00000307522 PCGF2P35227 344 aa15.19■□□□□ 0.02
CCDC8-201ENST00000307522 PXNP49023 591 aaPredicted RBP15.19■□□□□ 0.02
CCDC8-201ENST00000307522 GSG1Q2KHT4 349 aa15.19■□□□□ 0.02
CCDC8-201ENST00000307522 FAM78AQ5JUQ0 283 aa15.19■□□□□ 0.02
CCDC8-201ENST00000307522 SLC25A25Q6KCM7 469 aa15.19■□□□□ 0.02
CCDC8-201ENST00000307522 OR4K3Q96R72 315 aa15.19■□□□□ 0.02
CCDC8-201ENST00000307522 SECISBP2Q96T21 854 aaKnown RBP15.19■□□□□ 0.02
CCDC8-201ENST00000307522 KXD1Q9BQD3 176 aa15.19■□□□□ 0.02
CCDC8-201ENST00000307522 CHST8Q9H2A9 424 aa15.19■□□□□ 0.02
CCDC8-201ENST00000307522 POMT2Q9UKY4 750 aa15.19■□□□□ 0.02
CCDC8-201ENST00000307522 FXYD6-FXYD2A0A087WZ82 144 aa15.19■□□□□ 0.02
CCDC8-201ENST00000307522 CD22P20273 847 aa15.19■□□□□ 0.02
CCDC8-201ENST00000307522 AHCYP23526 432 aa15.19■□□□□ 0.02
CCDC8-201ENST00000307522 SPINT3P49223 89 aa15.19■□□□□ 0.02
CCDC8-201ENST00000307522 HTRA4P83105 476 aaPredicted RBP15.19■□□□□ 0.02
CCDC8-201ENST00000307522 SHHQ15465 462 aa15.19■□□□□ 0.02
CCDC8-201ENST00000307522 C3orf38Q5JPI3 329 aa15.19■□□□□ 0.02
CCDC8-201ENST00000307522 OR4D9Q8NGE8 314 aa15.19■□□□□ 0.02
CCDC8-201ENST00000307522 CLP1Q92989 425 aaKnown RBP15.19■□□□□ 0.02
CCDC8-201ENST00000307522 CMTM7Q96FZ5 175 aa15.19■□□□□ 0.02
CCDC8-201ENST00000307522 FXYD6Q9H0Q3 95 aa15.19■□□□□ 0.02
CCDC8-201ENST00000307522 NFKBIL1Q9UBC1 381 aaPredicted RBP15.19■□□□□ 0.02
CCDC8-201ENST00000307522 MGAT4CQ9UBM8 478 aa15.19■□□□□ 0.02
CCDC8-201ENST00000307522 ENPP4Q9Y6X5 453 aa15.19■□□□□ 0.02
CCDC8-201ENST00000307522 PLXNA4Q9HCM2 1894 aa15.19■□□□□ 0.02
CCDC8-201ENST00000307522 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.19■□□□□ 0.02
CCDC8-201ENST00000307522 RAB19A4D1S5 217 aa15.19■□□□□ 0.02
CCDC8-201ENST00000307522 ZNF254O75437 659 aa15.19■□□□□ 0.02
CCDC8-201ENST00000307522 ANXA5P08758 320 aa15.19■□□□□ 0.02
CCDC8-201ENST00000307522 RAB3BP20337 219 aa15.19■□□□□ 0.02
CCDC8-201ENST00000307522 XKR6Q5GH73 641 aa15.19■□□□□ 0.02
CCDC8-201ENST00000307522 CBLN2Q8IUK8 224 aa15.19■□□□□ 0.02
CCDC8-201ENST00000307522 TRAPPC5Q8IUR0 188 aa15.19■□□□□ 0.02
CCDC8-201ENST00000307522 PBX4Q9BYU1 374 aa15.19■□□□□ 0.02
CCDC8-201ENST00000307522 OSGEPL1Q9H4B0 414 aa15.19■□□□□ 0.02
CCDC8-201ENST00000307522 ISG20L2Q9H9L3 353 aaKnown RBP15.19■□□□□ 0.02
CCDC8-201ENST00000307522 PLCL2Q9UPR0 1127 aa15.19■□□□□ 0.02
CCDC8-201ENST00000307522 MEIKINA0A087WXM9 373 aa15.18■□□□□ 0.02
CCDC8-201ENST00000307522 C1orf226A1L170 272 aa15.18■□□□□ 0.02
CCDC8-201ENST00000307522 C7orf66A4D0T2 115 aa15.18■□□□□ 0.02
CCDC8-201ENST00000307522 SYNDIG1LA6NDD5 238 aa15.18■□□□□ 0.02
CCDC8-201ENST00000307522 M0R3H8 397 aa15.18■□□□□ 0.02
CCDC8-201ENST00000307522 HYAL3O43820 417 aaPredicted RBP15.18■□□□□ 0.02
CCDC8-201ENST00000307522 MPZL2O60487 215 aa15.18■□□□□ 0.02
CCDC8-201ENST00000307522 F12P00748 615 aaPredicted RBP15.18■□□□□ 0.02
CCDC8-201ENST00000307522 BCHEP06276 602 aa15.18■□□□□ 0.02
CCDC8-201ENST00000307522 ELFN1P0C7U0 828 aa15.18■□□□□ 0.02
CCDC8-201ENST00000307522 TIMP2P16035 220 aa15.18■□□□□ 0.02
CCDC8-201ENST00000307522 KCNJ3P48549 501 aa15.18■□□□□ 0.02
CCDC8-201ENST00000307522 IRF8Q02556 426 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms