RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 EBPQ15125 230 aaKnown RBP12.72□□□□□ -0.37
TRIM56-201ENST00000306085 KIAA0907Q7Z7F0 614 aaPredicted RBP12.72□□□□□ -0.37
TRIM56-201ENST00000306085 SCAMP5Q8TAC9 235 aa12.72□□□□□ -0.37
TRIM56-201ENST00000306085 SPTBN2O15020 2390 aa12.72□□□□□ -0.37
TRIM56-201ENST00000306085 FAM221BA6H8Z2 402 aa12.72□□□□□ -0.37
TRIM56-201ENST00000306085 H7BY64 318 aa12.72□□□□□ -0.37
TRIM56-201ENST00000306085 GLSO94925 669 aaPredicted RBP12.72□□□□□ -0.37
TRIM56-201ENST00000306085 ASGR2P07307 311 aa12.72□□□□□ -0.37
TRIM56-201ENST00000306085 THBS1P07996 1170 aa12.72□□□□□ -0.37
TRIM56-201ENST00000306085 RD3LP0DJH9 198 aa12.72□□□□□ -0.37
TRIM56-201ENST00000306085 SELPP16109 830 aa12.72□□□□□ -0.37
TRIM56-201ENST00000306085 DBPQ10586 325 aaPredicted RBP12.72□□□□□ -0.37
TRIM56-201ENST00000306085 AVPI1Q5T686 147 aa12.72□□□□□ -0.37
TRIM56-201ENST00000306085 CD163Q86VB7 1156 aa12.72□□□□□ -0.37
TRIM56-201ENST00000306085 VSIG10LQ86VR7 867 aa12.72□□□□□ -0.37
TRIM56-201ENST00000306085 GDPD1Q8N9F7 314 aa12.72□□□□□ -0.37
TRIM56-201ENST00000306085 SEMA6DQ8NFY4 1073 aa12.72□□□□□ -0.37
TRIM56-201ENST00000306085 PRAP1Q96NZ9 151 aa12.72□□□□□ -0.37
TRIM56-201ENST00000306085 CCNL2Q96S94 520 aaPredicted RBP12.72□□□□□ -0.37
TRIM56-201ENST00000306085 CWH43Q9H720 699 aa12.72□□□□□ -0.37
TRIM56-201ENST00000306085 CPNE7Q9UBL6 633 aa12.72□□□□□ -0.37
TRIM56-201ENST00000306085 CEP170Q5SW79 1584 aa12.72□□□□□ -0.37
TRIM56-201ENST00000306085 HLA-DMAP28067 261 aa12.72□□□□□ -0.37
TRIM56-201ENST00000306085 GRB7Q14451 532 aa12.72□□□□□ -0.37
TRIM56-201ENST00000306085 Q6ZVU0 165 aa12.72□□□□□ -0.37
TRIM56-201ENST00000306085 ADGRF3Q8IZF5 1079 aa12.72□□□□□ -0.37
TRIM56-201ENST00000306085 SLC15A4Q8N697 577 aa12.72□□□□□ -0.37
TRIM56-201ENST00000306085 STEAP2Q8NFT2 490 aa12.72□□□□□ -0.37
TRIM56-201ENST00000306085 DHRS9Q9BPW9 319 aa12.72□□□□□ -0.37
TRIM56-201ENST00000306085 COL1A2P08123 1366 aa12.72□□□□□ -0.37
TRIM56-201ENST00000306085 SMIM35A0A1B0GVV1 85 aa12.72□□□□□ -0.37
TRIM56-201ENST00000306085 DNAJB6O75190 326 aa12.72□□□□□ -0.37
TRIM56-201ENST00000306085 G0S2P27469 103 aa12.72□□□□□ -0.37
TRIM56-201ENST00000306085 CLDN6P56747 220 aa12.72□□□□□ -0.37
TRIM56-201ENST00000306085 CDHR3Q6ZTQ4 885 aa12.72□□□□□ -0.37
TRIM56-201ENST00000306085 OR14J1Q9UGF5 321 aa12.72□□□□□ -0.37
TRIM56-201ENST00000306085 A0A0D9SG52 128 aa12.72□□□□□ -0.37
TRIM56-201ENST00000306085 C17orf112F2Z3M2 114 aa12.72□□□□□ -0.37
TRIM56-201ENST00000306085 PPP1R2P9O14990 202 aa12.72□□□□□ -0.37
TRIM56-201ENST00000306085 GIFP27352 417 aa12.72□□□□□ -0.37
TRIM56-201ENST00000306085 GDI1P31150 447 aa12.72□□□□□ -0.37
TRIM56-201ENST00000306085 STK11Q15831 433 aa12.72□□□□□ -0.37
TRIM56-201ENST00000306085 CES4AQ5XG92 561 aa12.72□□□□□ -0.37
TRIM56-201ENST00000306085 CLEC4CQ8WTT0 213 aa12.72□□□□□ -0.37
TRIM56-201ENST00000306085 TSGA13Q96PP4 275 aa12.72□□□□□ -0.37
TRIM56-201ENST00000306085 SMIM28A0A1B0GU29 152 aa12.72□□□□□ -0.37
TRIM56-201ENST00000306085 RDH16O75452 317 aa12.72□□□□□ -0.37
TRIM56-201ENST00000306085 EPOP01588 193 aa12.72□□□□□ -0.37
TRIM56-201ENST00000306085 SFTPDP35247 375 aa12.72□□□□□ -0.37
TRIM56-201ENST00000306085 TAGLN2P37802 199 aaKnown RBP12.72□□□□□ -0.37
TRIM56-201ENST00000306085 GABRA2P47869 451 aa12.72□□□□□ -0.37
TRIM56-201ENST00000306085 B3GLCTQ6Y288 498 aa12.72□□□□□ -0.37
TRIM56-201ENST00000306085 KIAA0355O15063 1070 aa12.72□□□□□ -0.37
TRIM56-201ENST00000306085 F2RL1P55085 397 aa12.72□□□□□ -0.37
TRIM56-201ENST00000306085 SLC35F2Q8IXU6 374 aa12.72□□□□□ -0.37
TRIM56-201ENST00000306085 OR51L1Q8NGJ5 315 aa12.72□□□□□ -0.37
TRIM56-201ENST00000306085 IL31RAQ8NI17 732 aa12.72□□□□□ -0.37
TRIM56-201ENST00000306085 PRR11Q96HE9 360 aaPredicted RBP12.72□□□□□ -0.37
TRIM56-201ENST00000306085 HAPLN3Q96S86 360 aa12.72□□□□□ -0.37
TRIM56-201ENST00000306085 DPH2Q9BQC3 489 aaPredicted RBP12.72□□□□□ -0.37
TRIM56-201ENST00000306085 P04436 131 aa12.72□□□□□ -0.37
TRIM56-201ENST00000306085 OTX2P32243 289 aa12.72□□□□□ -0.37
TRIM56-201ENST00000306085 OR9A1PQ8NGU1 263 aa12.72□□□□□ -0.37
TRIM56-201ENST00000306085 SH3RF2Q8TEC5 729 aa12.72□□□□□ -0.37
TRIM56-201ENST00000306085 MKRN2Q9H000 416 aaKnown RBP12.72□□□□□ -0.37
TRIM56-201ENST00000306085 MYOTQ9UBF9 498 aa12.72□□□□□ -0.37
TRIM56-201ENST00000306085 FAM171A2A8MVW0 826 aa12.71□□□□□ -0.37
TRIM56-201ENST00000306085 SURF4O15260 269 aa12.71□□□□□ -0.37
TRIM56-201ENST00000306085 OR10K2Q6IF99 312 aa12.71□□□□□ -0.37
TRIM56-201ENST00000306085 OR13J1Q8NGT2 312 aa12.71□□□□□ -0.37
TRIM56-201ENST00000306085 OR52P1PQ8NH57 321 aa12.71□□□□□ -0.37
TRIM56-201ENST00000306085 SERTM2A0A1B0GWG4 89 aa12.71□□□□□ -0.37
TRIM56-201ENST00000306085 A0A1W2PRU2 124 aa12.71□□□□□ -0.37
TRIM56-201ENST00000306085 DBHP09172 617 aa12.71□□□□□ -0.37
TRIM56-201ENST00000306085 GKP32189 559 aa12.71□□□□□ -0.37
TRIM56-201ENST00000306085 SEC61A1P61619 476 aaKnown RBP12.71□□□□□ -0.37
TRIM56-201ENST00000306085 PIN1Q13526 163 aaPredicted RBP12.71□□□□□ -0.37
TRIM56-201ENST00000306085 PRAMEF8Q5VWM4 474 aa12.71□□□□□ -0.37
TRIM56-201ENST00000306085 PRAMEF7Q5VXH5 474 aa12.71□□□□□ -0.37
TRIM56-201ENST00000306085 AGTRAPQ6RW13 159 aa12.71□□□□□ -0.37
TRIM56-201ENST00000306085 STT3BQ8TCJ2 826 aa12.71□□□□□ -0.37
TRIM56-201ENST00000306085 DOK4Q8TEW6 326 aa12.71□□□□□ -0.37
TRIM56-201ENST00000306085 ALG8Q9BVK2 526 aa12.71□□□□□ -0.37
TRIM56-201ENST00000306085 GABARAPH6UMI1 98 aa12.71□□□□□ -0.37
TRIM56-201ENST00000306085 ACOT7O00154 380 aa12.71□□□□□ -0.37
TRIM56-201ENST00000306085 GABARAPO95166 117 aa12.71□□□□□ -0.37
TRIM56-201ENST00000306085 IMPA1P29218 277 aa12.71□□□□□ -0.37
TRIM56-201ENST00000306085 TESK1Q15569 626 aa12.71□□□□□ -0.37
TRIM56-201ENST00000306085 PRRC1Q96M27 445 aa12.71□□□□□ -0.37
TRIM56-201ENST00000306085 GAREM1Q9H706 876 aa12.71□□□□□ -0.37
TRIM56-201ENST00000306085 CUTCQ9NTM9 273 aa12.71□□□□□ -0.37
TRIM56-201ENST00000306085 HPGDSO60760 199 aa12.71□□□□□ -0.37
TRIM56-201ENST00000306085 NXPH3O95157 252 aa12.71□□□□□ -0.37
TRIM56-201ENST00000306085 FBXO45P0C2W1 286 aa12.71□□□□□ -0.37
TRIM56-201ENST00000306085 EDN3P14138 238 aa12.71□□□□□ -0.37
TRIM56-201ENST00000306085 FOLR1P15328 257 aa12.71□□□□□ -0.37
TRIM56-201ENST00000306085 GCNT2Q8N0V5 402 aa12.71□□□□□ -0.37
TRIM56-201ENST00000306085 DNAJC19Q96DA6 116 aa12.71□□□□□ -0.37
TRIM56-201ENST00000306085 SLC15A5A6NIM6 579 aa12.71□□□□□ -0.37
TRIM56-201ENST00000306085 FKTNO75072 461 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms