RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 MOAP1Q96BY2 351 aa23.97■■□□□ 1.43
CDKN2A-201ENST00000304494 C16orf58Q96GQ5 468 aa23.97■■□□□ 1.43
CDKN2A-201ENST00000304494 STACQ99469 402 aa23.97■■□□□ 1.43
CDKN2A-201ENST00000304494 TUBA1CQ9BQE3 449 aa23.97■■□□□ 1.43
CDKN2A-201ENST00000304494 G6PC3Q9BUM1 346 aa23.97■■□□□ 1.43
CDKN2A-201ENST00000304494 DUSP26Q9BV47 211 aa23.97■■□□□ 1.43
CDKN2A-201ENST00000304494 RTN4RQ9BZR6 473 aa23.97■■□□□ 1.43
CDKN2A-201ENST00000304494 DUSP22Q9NRW4 184 aa23.97■■□□□ 1.43
CDKN2A-201ENST00000304494 GIN1Q9NXP7 522 aa23.97■■□□□ 1.43
CDKN2A-201ENST00000304494 MED11Q9P086 117 aa23.97■■□□□ 1.43
CDKN2A-201ENST00000304494 HCFC1P51610 2035 aa23.96■■□□□ 1.43
CDKN2A-201ENST00000304494 C17orf51A8MQB3 221 aa23.96■■□□□ 1.43
CDKN2A-201ENST00000304494 SOX30O94993 753 aa23.96■■□□□ 1.43
CDKN2A-201ENST00000304494 ANGPTL1O95841 491 aa23.96■■□□□ 1.43
CDKN2A-201ENST00000304494 KRT16P08779 473 aa23.96■■□□□ 1.43
CDKN2A-201ENST00000304494 HK1P19367 917 aa23.96■■□□□ 1.43
CDKN2A-201ENST00000304494 CCT3P49368 545 aaKnown RBP23.96■■□□□ 1.43
CDKN2A-201ENST00000304494 BCL2A1Q16548 175 aa23.96■■□□□ 1.43
CDKN2A-201ENST00000304494 SPDYE7PQ495Y7 208 aa23.96■■□□□ 1.43
CDKN2A-201ENST00000304494 YIPF4Q9BSR8 244 aa23.96■■□□□ 1.43
CDKN2A-201ENST00000304494 DCHS2Q6V1P9 2916 aa23.96■■□□□ 1.43
CDKN2A-201ENST00000304494 PKDREJQ9NTG1 2253 aa23.95■■□□□ 1.43
CDKN2A-201ENST00000304494 IGLV3-32A0A0A0MS00 114 aa23.95■■□□□ 1.42
CDKN2A-201ENST00000304494 TMEM120BA0PK00 339 aa23.95■■□□□ 1.42
CDKN2A-201ENST00000304494 LINC01387J3KSC0 135 aa23.95■■□□□ 1.42
CDKN2A-201ENST00000304494 CFLARO15519 480 aa23.95■■□□□ 1.42
CDKN2A-201ENST00000304494 C6orf47O95873 294 aa23.95■■□□□ 1.42
CDKN2A-201ENST00000304494 ZNF708P17019 499 aa23.95■■□□□ 1.42
CDKN2A-201ENST00000304494 TCEA1P23193 301 aaKnown RBP23.95■■□□□ 1.42
CDKN2A-201ENST00000304494 STARP49675 285 aa23.95■■□□□ 1.42
CDKN2A-201ENST00000304494 TLE4Q04727 773 aa23.95■■□□□ 1.42
CDKN2A-201ENST00000304494 BST1Q10588 318 aa23.95■■□□□ 1.42
CDKN2A-201ENST00000304494 LASP1Q14847 261 aaKnown RBP23.95■■□□□ 1.42
CDKN2A-201ENST00000304494 EXOSC6Q5RKV6 272 aaKnown RBP23.95■■□□□ 1.42
CDKN2A-201ENST00000304494 RAET1LQ5VY80 246 aa23.95■■□□□ 1.42
CDKN2A-201ENST00000304494 CDC73Q6P1J9 531 aa23.95■■□□□ 1.42
CDKN2A-201ENST00000304494 FIGNL1Q6PIW4 674 aa23.95■■□□□ 1.42
CDKN2A-201ENST00000304494 GOT1L1Q8NHS2 421 aaPredicted RBP23.95■■□□□ 1.42
CDKN2A-201ENST00000304494 SFXN5Q8TD22 340 aa23.95■■□□□ 1.42
CDKN2A-201ENST00000304494 C1GALT1C1Q96EU7 318 aa23.95■■□□□ 1.42
CDKN2A-201ENST00000304494 CHMP6Q96FZ7 201 aa23.95■■□□□ 1.42
CDKN2A-201ENST00000304494 LURAP1Q96LR2 239 aa23.95■■□□□ 1.42
CDKN2A-201ENST00000304494 UCN2Q96RP3 112 aa23.95■■□□□ 1.42
CDKN2A-201ENST00000304494 TM9SF2Q99805 663 aa23.95■■□□□ 1.42
CDKN2A-201ENST00000304494 BTBD2Q9BX70 525 aa23.95■■□□□ 1.42
CDKN2A-201ENST00000304494 PIGUQ9H490 435 aa23.95■■□□□ 1.42
CDKN2A-201ENST00000304494 CXorf36Q9H7Y0 433 aa23.95■■□□□ 1.42
CDKN2A-201ENST00000304494 KCNN3Q9UGI6 736 aa23.95■■□□□ 1.42
CDKN2A-201ENST00000304494 FAF1Q9UNN5 650 aaPredicted RBP23.95■■□□□ 1.42
CDKN2A-201ENST00000304494 CSMD1Q96PZ7 3565 aa23.94■■□□□ 1.42
CDKN2A-201ENST00000304494 ALG1L2C9J202 215 aa23.94■■□□□ 1.42
CDKN2A-201ENST00000304494 OXSR1O95747 527 aaPredicted RBP23.94■■□□□ 1.42
CDKN2A-201ENST00000304494 HPGDP15428 266 aa23.94■■□□□ 1.42
CDKN2A-201ENST00000304494 TBXA2RP21731 343 aa23.94■■□□□ 1.42
CDKN2A-201ENST00000304494 CTSSP25774 331 aa23.94■■□□□ 1.42
CDKN2A-201ENST00000304494 PEX19P40855 299 aa23.94■■□□□ 1.42
CDKN2A-201ENST00000304494 ASCL1P50553 236 aa23.94■■□□□ 1.42
CDKN2A-201ENST00000304494 ZNF136P52737 540 aa23.94■■□□□ 1.42
CDKN2A-201ENST00000304494 DGKQP52824 942 aa23.94■■□□□ 1.42
CDKN2A-201ENST00000304494 SLC18A1P54219 525 aa23.94■■□□□ 1.42
CDKN2A-201ENST00000304494 CLDN18P56856 261 aa23.94■■□□□ 1.42
CDKN2A-201ENST00000304494 B3GALT5-AS1P59052 145 aa23.94■■□□□ 1.42
CDKN2A-201ENST00000304494 POU6F2P78424 691 aaPredicted RBP23.94■■□□□ 1.42
CDKN2A-201ENST00000304494 TP53BP2Q13625 1128 aa23.94■■□□□ 1.42
CDKN2A-201ENST00000304494 PGS1Q32NB8 556 aa23.94■■□□□ 1.42
CDKN2A-201ENST00000304494 GLYR1Q49A26 553 aaPredicted RBP23.94■■□□□ 1.42
CDKN2A-201ENST00000304494 BEND6Q5SZJ8 279 aaPredicted RBP23.94■■□□□ 1.42
CDKN2A-201ENST00000304494 BHLHB9Q6PI77 547 aa23.94■■□□□ 1.42
CDKN2A-201ENST00000304494 APOOLQ6UXV4 268 aa23.94■■□□□ 1.42
CDKN2A-201ENST00000304494 ADGRE4PQ86SQ3 457 aa23.94■■□□□ 1.42
CDKN2A-201ENST00000304494 GALNT10Q86SR1 603 aa23.94■■□□□ 1.42
CDKN2A-201ENST00000304494 RELL2Q8NC24 303 aaPredicted RBP23.94■■□□□ 1.42
CDKN2A-201ENST00000304494 OR4C3Q8NH37 302 aa23.94■■□□□ 1.42
CDKN2A-201ENST00000304494 NUDT8Q8WV74 236 aa23.94■■□□□ 1.42
CDKN2A-201ENST00000304494 ZFP3Q96NJ6 502 aa23.94■■□□□ 1.42
CDKN2A-201ENST00000304494 PIGQQ9BRB3 760 aa23.94■■□□□ 1.42
CDKN2A-201ENST00000304494 ACTRT3Q9BYD9 372 aa23.94■■□□□ 1.42
CDKN2A-201ENST00000304494 NUF2Q9BZD4 464 aa23.94■■□□□ 1.42
CDKN2A-201ENST00000304494 MCCC2Q9HCC0 563 aa23.94■■□□□ 1.42
CDKN2A-201ENST00000304494 UBQLN4Q9NRR5 601 aa23.94■■□□□ 1.42
CDKN2A-201ENST00000304494 ENO4A6NNW6 628 aa23.93■■□□□ 1.42
CDKN2A-201ENST00000304494 CLCA1A8K7I4 914 aa23.93■■□□□ 1.42
CDKN2A-201ENST00000304494 NDUFB5O43674 189 aa23.93■■□□□ 1.42
CDKN2A-201ENST00000304494 PEPDP12955 493 aa23.93■■□□□ 1.42
CDKN2A-201ENST00000304494 OPRM1P35372 400 aa23.93■■□□□ 1.42
CDKN2A-201ENST00000304494 CHMP1BQ7LBR1 199 aa23.93■■□□□ 1.42
CDKN2A-201ENST00000304494 C9orf106Q8NAJ2 232 aa23.93■■□□□ 1.42
CDKN2A-201ENST00000304494 ADAMTS15Q8TE58 950 aa23.93■■□□□ 1.42
CDKN2A-201ENST00000304494 CDS1Q92903 461 aa23.93■■□□□ 1.42
CDKN2A-201ENST00000304494 WNT2BQ93097 391 aa23.93■■□□□ 1.42
CDKN2A-201ENST00000304494 OTUB1Q96FW1 271 aaPredicted RBP23.93■■□□□ 1.42
CDKN2A-201ENST00000304494 DPY30Q9C005 99 aa23.93■■□□□ 1.42
CDKN2A-201ENST00000304494 MEAF6Q9HAF1 191 aa23.93■■□□□ 1.42
CDKN2A-201ENST00000304494 NKIRAS1Q9NYS0 192 aa23.93■■□□□ 1.42
CDKN2A-201ENST00000304494 FOXD3Q9UJU5 478 aaPredicted RBP23.93■■□□□ 1.42
CDKN2A-201ENST00000304494 SYT5O00445 386 aa23.92■■□□□ 1.42
CDKN2A-201ENST00000304494 SCDO00767 359 aa23.92■■□□□ 1.42
CDKN2A-201ENST00000304494 IL18BPO95998 194 aa23.92■■□□□ 1.42
CDKN2A-201ENST00000304494 TMIGD3P0DMS9 266 aaPredicted RBP23.92■■□□□ 1.42
CDKN2A-201ENST00000304494 LBPP18428 481 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms