RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 PPP1R3DO95685 299 aa9.84□□□□□ -0.83
CLIP1-201ENST00000302528 AKAIN1P0CW23 69 aa9.84□□□□□ -0.83
CLIP1-201ENST00000302528 JUPP14923 745 aa9.84□□□□□ -0.83
CLIP1-201ENST00000302528 ZNF28P17035 718 aa9.84□□□□□ -0.83
CLIP1-201ENST00000302528 CRABP1P29762 137 aa9.84□□□□□ -0.83
CLIP1-201ENST00000302528 GABRA2P47869 451 aa9.84□□□□□ -0.83
CLIP1-201ENST00000302528 ZNF648Q5T619 568 aaPredicted RBP9.84□□□□□ -0.83
CLIP1-201ENST00000302528 ZFAND4Q86XD8 727 aa9.84□□□□□ -0.83
CLIP1-201ENST00000302528 IL17RDQ8NFM7 739 aa9.84□□□□□ -0.83
CLIP1-201ENST00000302528 OR5B2Q96R09 309 aa9.84□□□□□ -0.83
CLIP1-201ENST00000302528 ADAMTS10Q9H324 1103 aa9.84□□□□□ -0.83
CLIP1-201ENST00000302528 LATO43561 262 aa9.84□□□□□ -0.83
CLIP1-201ENST00000302528 CRHBPP24387 322 aa9.84□□□□□ -0.83
CLIP1-201ENST00000302528 IL1R2P27930 398 aa9.84□□□□□ -0.83
CLIP1-201ENST00000302528 SLC18A1P54219 525 aa9.84□□□□□ -0.83
CLIP1-201ENST00000302528 NDUFA6P56556 154 aa9.84□□□□□ -0.83
CLIP1-201ENST00000302528 DNAJB13P59910 316 aa9.84□□□□□ -0.83
CLIP1-201ENST00000302528 DEFA6Q01524 100 aa9.84□□□□□ -0.83
CLIP1-201ENST00000302528 ACY1Q03154 408 aa9.84□□□□□ -0.83
CLIP1-201ENST00000302528 MGAT3Q09327 533 aa9.84□□□□□ -0.83
CLIP1-201ENST00000302528 CDONQ4KMG0 1287 aa9.84□□□□□ -0.83
CLIP1-201ENST00000302528 CCNJQ5T5M9 372 aa9.84□□□□□ -0.83
CLIP1-201ENST00000302528 OR4C11Q6IEV9 310 aa9.84□□□□□ -0.83
CLIP1-201ENST00000302528 PLXDC1Q8IUK5 500 aa9.84□□□□□ -0.83
CLIP1-201ENST00000302528 ADAMTS19Q8TE59 1207 aa9.84□□□□□ -0.83
CLIP1-201ENST00000302528 GTF2H4Q92759 462 aa9.84□□□□□ -0.83
CLIP1-201ENST00000302528 OCSTAMPQ9BR26 566 aa9.84□□□□□ -0.83
CLIP1-201ENST00000302528 GPR83Q9NYM4 423 aa9.84□□□□□ -0.83
CLIP1-201ENST00000302528 INSL5Q9Y5Q6 135 aa9.84□□□□□ -0.83
CLIP1-201ENST00000302528 PRAMEF11O60813 436 aa9.84□□□□□ -0.83
CLIP1-201ENST00000302528 HBQ1P09105 142 aa9.84□□□□□ -0.83
CLIP1-201ENST00000302528 MPC1LP0DKB6 136 aa9.84□□□□□ -0.83
CLIP1-201ENST00000302528 IL2RGP31785 369 aa9.84□□□□□ -0.83
CLIP1-201ENST00000302528 AAK1Q2M2I8 961 aa9.84□□□□□ -0.83
CLIP1-201ENST00000302528 C3orf38Q5JPI3 329 aa9.84□□□□□ -0.83
CLIP1-201ENST00000302528 CLVS2Q5SYC1 327 aa9.84□□□□□ -0.83
CLIP1-201ENST00000302528 UNC5DQ6UXZ4 953 aa9.84□□□□□ -0.83
CLIP1-201ENST00000302528 NLRP8Q86W28 1048 aa9.84□□□□□ -0.83
CLIP1-201ENST00000302528 RBMXL3Q8N7X1 1067 aaKnown RBP9.84□□□□□ -0.83
CLIP1-201ENST00000302528 C2CD4AQ8NCU7 369 aaPredicted RBP9.84□□□□□ -0.83
CLIP1-201ENST00000302528 PAPD5Q8NDF8 572 aaKnown RBP9.84□□□□□ -0.83
CLIP1-201ENST00000302528 LIPHQ8WWY8 451 aa9.84□□□□□ -0.83
CLIP1-201ENST00000302528 OR1E3Q8WZA6 343 aa9.84□□□□□ -0.83
CLIP1-201ENST00000302528 RAB7BQ96AH8 199 aa9.84□□□□□ -0.83
CLIP1-201ENST00000302528 GINS3Q9BRX5 216 aa9.84□□□□□ -0.83
CLIP1-201ENST00000302528 ADAM19Q9H013 955 aa9.84□□□□□ -0.83
CLIP1-201ENST00000302528 OR10A5Q9H207 317 aa9.84□□□□□ -0.83
CLIP1-201ENST00000302528 OR10A2Q9H208 303 aa9.84□□□□□ -0.83
CLIP1-201ENST00000302528 CHRDQ9H2X0 955 aa9.84□□□□□ -0.83
CLIP1-201ENST00000302528 GPN2Q9H9Y4 310 aaPredicted RBP9.84□□□□□ -0.83
CLIP1-201ENST00000302528 SALL4Q9UJQ4 1053 aa9.84□□□□□ -0.83
CLIP1-201ENST00000302528 GPR52Q9Y2T5 361 aa9.84□□□□□ -0.83
CLIP1-201ENST00000302528 PUS1Q9Y606 427 aaKnown RBP eCLIP9.84□□□□□ -0.83
CLIP1-201ENST00000302528 AFDNP55196 1824 aaKnown RBP9.84□□□□□ -0.83
CLIP1-201ENST00000302528 FAM171A2A8MVW0 826 aa9.84□□□□□ -0.83
CLIP1-201ENST00000302528 B4DXG7 233 aa9.84□□□□□ -0.83
CLIP1-201ENST00000302528 EFNA3P52797 238 aa9.84□□□□□ -0.83
CLIP1-201ENST00000302528 TBPL1P62380 186 aa9.84□□□□□ -0.83
CLIP1-201ENST00000302528 GRM7Q14831 915 aa9.84□□□□□ -0.83
CLIP1-201ENST00000302528 PCLAFQ15004 111 aa9.84□□□□□ -0.83
CLIP1-201ENST00000302528 PPP1R3AQ16821 1122 aa9.84□□□□□ -0.83
CLIP1-201ENST00000302528 TANGO2Q6ICL3 276 aa9.84□□□□□ -0.83
CLIP1-201ENST00000302528 TMEM71Q6P5X7 295 aa9.84□□□□□ -0.83
CLIP1-201ENST00000302528 CDHR3Q6ZTQ4 885 aa9.84□□□□□ -0.83
CLIP1-201ENST00000302528 CHFRQ96EP1 664 aa9.84□□□□□ -0.83
CLIP1-201ENST00000302528 ZNF587Q96SQ5 575 aaPredicted RBP9.84□□□□□ -0.83
CLIP1-201ENST00000302528 DPH2Q9BQC3 489 aaPredicted RBP9.84□□□□□ -0.83
CLIP1-201ENST00000302528 NAP1L6A6NFF2 107 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 SEC14L6B5MCN3 397 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 H3BML4 177 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 ENSAO43768 121 aaKnown RBP9.83□□□□□ -0.84
CLIP1-201ENST00000302528 SERPINF1P36955 418 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 RPL13AP40429 203 aaKnown RBP9.83□□□□□ -0.84
CLIP1-201ENST00000302528 SGSHP51688 502 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 SHC2P98077 582 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 EXOSC6Q5RKV6 272 aaKnown RBP9.83□□□□□ -0.84
CLIP1-201ENST00000302528 ATPAF1Q5TC12 328 aaPredicted RBP9.83□□□□□ -0.84
CLIP1-201ENST00000302528 SPRYD7Q5W111 196 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 TSSK4Q6SA08 328 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 ZNF705AQ6ZN79 300 aaPredicted RBP9.83□□□□□ -0.84
CLIP1-201ENST00000302528 EGFL6Q8IUX8 553 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 CCDC71Q8IV32 467 aaPredicted RBP9.83□□□□□ -0.84
CLIP1-201ENST00000302528 NRMQ8IXM6 262 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 CNTNAP3Q9BZ76 1288 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 SLC38A1Q9H2H9 487 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 SMOXQ9NWM0 555 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 MCTS1Q9ULC4 181 aaKnown RBP9.83□□□□□ -0.84
CLIP1-201ENST00000302528 OARD1Q9Y530 152 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 NUBP2Q9Y5Y2 271 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 BCL9O00512 1426 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 NPIPA5A0A0B4J1W7 369 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 A0A1W2PQL4 384 aaPredicted RBP9.83□□□□□ -0.84
CLIP1-201ENST00000302528 NPIPA7E9PJI5 369 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 JRKO75564 520 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 NPIPA8P0DM63 369 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 CT45A6P0DMU7 189 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 CT45A5P0DMU8 189 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 CT45A7P0DMV0 189 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 CT45A8P0DMV1 189 aa9.83□□□□□ -0.84
CLIP1-201ENST00000302528 CT45A9P0DMV2 189 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms