RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 A0A1W2PQM1 296 aa11.13□□□□□ -0.63
TPM3-202ENST00000302206 GXYLT2A0PJZ3 443 aa11.13□□□□□ -0.63
TPM3-202ENST00000302206 ZAR1LA6NP61 321 aa11.13□□□□□ -0.63
TPM3-202ENST00000302206 A8MU76 341 aa11.13□□□□□ -0.63
TPM3-202ENST00000302206 DYRK3O43781 588 aa11.13□□□□□ -0.63
TPM3-202ENST00000302206 HYAL3O43820 417 aaPredicted RBP11.13□□□□□ -0.63
TPM3-202ENST00000302206 OR10H3O60404 316 aa11.13□□□□□ -0.63
TPM3-202ENST00000302206 ONECUT2O95948 504 aa11.13□□□□□ -0.63
TPM3-202ENST00000302206 RPLP0P05388 317 aaKnown RBP11.13□□□□□ -0.63
TPM3-202ENST00000302206 ZNF883P0CG24 379 aa11.13□□□□□ -0.63
TPM3-202ENST00000302206 GSTM3P21266 225 aa11.13□□□□□ -0.63
TPM3-202ENST00000302206 MAOAP21397 527 aa11.13□□□□□ -0.63
TPM3-202ENST00000302206 FUT4P22083 530 aa11.13□□□□□ -0.63
TPM3-202ENST00000302206 ALAS2P22557 587 aa11.13□□□□□ -0.63
TPM3-202ENST00000302206 EEF1B2P24534 225 aaKnown RBP11.13□□□□□ -0.63
TPM3-202ENST00000302206 RORAP35398 523 aa11.13□□□□□ -0.63
TPM3-202ENST00000302206 LIMK1P53667 647 aa11.13□□□□□ -0.63
TPM3-202ENST00000302206 RHAGQ02094 409 aa11.13□□□□□ -0.63
TPM3-202ENST00000302206 ERV3-1Q14264 604 aa11.13□□□□□ -0.63
TPM3-202ENST00000302206 GPR68Q15743 365 aa11.13□□□□□ -0.63
TPM3-202ENST00000302206 DECR1Q16698 335 aa11.13□□□□□ -0.63
TPM3-202ENST00000302206 ENTPD8Q5MY95 495 aa11.13□□□□□ -0.63
TPM3-202ENST00000302206 RHBDD2Q6NTF9 364 aa11.13□□□□□ -0.63
TPM3-202ENST00000302206 C1orf94Q6P1W5 598 aa11.13□□□□□ -0.63
TPM3-202ENST00000302206 B3GNT8Q7Z7M8 397 aa11.13□□□□□ -0.63
TPM3-202ENST00000302206 RANBP3LQ86VV4 465 aaPredicted RBP11.13□□□□□ -0.63
TPM3-202ENST00000302206 BPHLQ86WA6 291 aaPredicted RBP11.13□□□□□ -0.63
TPM3-202ENST00000302206 GRAMD2AQ8IUY3 354 aa11.13□□□□□ -0.63
TPM3-202ENST00000302206 CCDC71Q8IV32 467 aaPredicted RBP11.13□□□□□ -0.63
TPM3-202ENST00000302206 ENTHD1Q8IYW4 607 aa11.13□□□□□ -0.63
TPM3-202ENST00000302206 ALDH16A1Q8IZ83 802 aa11.13□□□□□ -0.63
TPM3-202ENST00000302206 CLIP4Q8N3C7 705 aa11.13□□□□□ -0.63
TPM3-202ENST00000302206 METTL27Q8N6F8 245 aaPredicted RBP11.13□□□□□ -0.63
TPM3-202ENST00000302206 EID2Q8N6I1 236 aa11.13□□□□□ -0.63
TPM3-202ENST00000302206 RHOXF1Q8NHV9 184 aa11.13□□□□□ -0.63
TPM3-202ENST00000302206 IPCEF1Q8WWN9 437 aaPredicted RBP11.13□□□□□ -0.63
TPM3-202ENST00000302206 GTPBP3Q969Y2 492 aaKnown RBP11.13□□□□□ -0.63
TPM3-202ENST00000302206 LOXL4Q96JB6 756 aa11.13□□□□□ -0.63
TPM3-202ENST00000302206 PTCHD1Q96NR3 888 aa11.13□□□□□ -0.63
TPM3-202ENST00000302206 MCHR1Q99705 422 aa11.13□□□□□ -0.63
TPM3-202ENST00000302206 G6PC3Q9BUM1 346 aa11.13□□□□□ -0.63
TPM3-202ENST00000302206 TGIF2Q9GZN2 237 aa11.13□□□□□ -0.63
TPM3-202ENST00000302206 OR10A5Q9H207 317 aa11.13□□□□□ -0.63
TPM3-202ENST00000302206 CXorf56Q9H5V9 222 aa11.13□□□□□ -0.63
TPM3-202ENST00000302206 Q9N2J8 555 aa11.13□□□□□ -0.63
TPM3-202ENST00000302206 CCNB1IP1Q9NPC3 277 aa11.13□□□□□ -0.63
TPM3-202ENST00000302206 NDOR1Q9UHB4 597 aa11.13□□□□□ -0.63
TPM3-202ENST00000302206 ZMIZ1Q9ULJ6 1067 aa11.13□□□□□ -0.63
TPM3-202ENST00000302206 RNF6Q9Y252 685 aa11.13□□□□□ -0.63
TPM3-202ENST00000302206 CFL2Q9Y281 166 aa11.13□□□□□ -0.63
TPM3-202ENST00000302206 GPR55Q9Y2T6 319 aaPredicted RBP11.13□□□□□ -0.63
TPM3-202ENST00000302206 PCDHGB1Q9Y5G3 927 aa11.13□□□□□ -0.63
TPM3-202ENST00000302206 MAU2Q9Y6X3 613 aa11.13□□□□□ -0.63
TPM3-202ENST00000302206 KNL1Q8NG31 2342 aa11.13□□□□□ -0.63
TPM3-202ENST00000302206 ZZEF1O43149 2961 aa11.13□□□□□ -0.63
TPM3-202ENST00000302206 LAMA1P25391 3075 aa11.12□□□□□ -0.63
TPM3-202ENST00000302206 SPEGQ15772 3267 aa11.12□□□□□ -0.63
TPM3-202ENST00000302206 IGHV5-10-1A0A0J9YXX1 117 aa11.12□□□□□ -0.63
TPM3-202ENST00000302206 TCRBV16S1A1N1A0A5B0 115 aa11.12□□□□□ -0.63
TPM3-202ENST00000302206 CDHR4A6H8M9 788 aa11.12□□□□□ -0.63
TPM3-202ENST00000302206 NPIPB9F8W1W9 429 aa11.12□□□□□ -0.63
TPM3-202ENST00000302206 ZNF701M0R085 212 aaPredicted RBP11.12□□□□□ -0.63
TPM3-202ENST00000302206 TPST2O60704 377 aa11.12□□□□□ -0.63
TPM3-202ENST00000302206 CDC123O75794 336 aaPredicted RBP11.12□□□□□ -0.63
TPM3-202ENST00000302206 CLPSP04118 112 aa11.12□□□□□ -0.63
TPM3-202ENST00000302206 IFNA16P05015 189 aa11.12□□□□□ -0.63
TPM3-202ENST00000302206 HBQ1P09105 142 aa11.12□□□□□ -0.63
TPM3-202ENST00000302206 TNNI3P19429 210 aa11.12□□□□□ -0.63
TPM3-202ENST00000302206 AGXTP21549 392 aa11.12□□□□□ -0.63
TPM3-202ENST00000302206 LCN1P31025 176 aa11.12□□□□□ -0.63
TPM3-202ENST00000302206 SSTR4P31391 388 aa11.12□□□□□ -0.63
TPM3-202ENST00000302206 OR1D4P47884 311 aa11.12□□□□□ -0.63
TPM3-202ENST00000302206 ZNF136P52737 540 aa11.12□□□□□ -0.63
TPM3-202ENST00000302206 CDC42P60953 191 aa11.12□□□□□ -0.63
TPM3-202ENST00000302206 TUBA3CQ13748 450 aa11.12□□□□□ -0.63
TPM3-202ENST00000302206 ELAVL1Q15717 326 aaKnown RBP11.12□□□□□ -0.63
TPM3-202ENST00000302206 ZNF141Q15928 474 aa11.12□□□□□ -0.63
TPM3-202ENST00000302206 MAPK14Q16539 360 aa11.12□□□□□ -0.63
TPM3-202ENST00000302206 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.12□□□□□ -0.63
TPM3-202ENST00000302206 CNPY1Q3B7I2 92 aa11.12□□□□□ -0.63
TPM3-202ENST00000302206 CCNJQ5T5M9 372 aa11.12□□□□□ -0.63
TPM3-202ENST00000302206 UNQ6494/PRO21346Q6UXR6 183 aa11.12□□□□□ -0.63
TPM3-202ENST00000302206 RBM44Q6ZP01 1051 aaKnown RBP11.12□□□□□ -0.63
TPM3-202ENST00000302206 KCTD8Q6ZWB6 473 aa11.12□□□□□ -0.63
TPM3-202ENST00000302206 PLEKHM3Q6ZWE6 761 aa11.12□□□□□ -0.63
TPM3-202ENST00000302206 GPR141Q7Z602 305 aa11.12□□□□□ -0.63
TPM3-202ENST00000302206 HMGN2P46Q86SG4 172 aa11.12□□□□□ -0.63
TPM3-202ENST00000302206 CMIPQ8IY22 773 aa11.12□□□□□ -0.63
TPM3-202ENST00000302206 PLPP5Q8NEB5 264 aa11.12□□□□□ -0.63
TPM3-202ENST00000302206 OR4K5Q8NGD3 323 aa11.12□□□□□ -0.63
TPM3-202ENST00000302206 CNIH3Q8TBE1 160 aa11.12□□□□□ -0.63
TPM3-202ENST00000302206 GNPDA2Q8TDQ7 276 aa11.12□□□□□ -0.63
TPM3-202ENST00000302206 DOK4Q8TEW6 326 aa11.12□□□□□ -0.63
TPM3-202ENST00000302206 PTPMT1Q8WUK0 201 aaPredicted RBP11.12□□□□□ -0.63
TPM3-202ENST00000302206 ART5Q96L15 291 aa11.12□□□□□ -0.63
TPM3-202ENST00000302206 SLC46A1Q96NT5 459 aa11.12□□□□□ -0.63
TPM3-202ENST00000302206 FSCN3Q9NQT6 498 aa11.12□□□□□ -0.63
TPM3-202ENST00000302206 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.12□□□□□ -0.63
TPM3-202ENST00000302206 C14orf105Q9NVL8 296 aa11.12□□□□□ -0.63
TPM3-202ENST00000302206 DHCR7Q9UBM7 475 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms