RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 CUEDC1Q9NWM3 386 aaPredicted RBP13.74□□□□□ -0.21
COL6A2-201ENST00000300527 AHSPQ9NZD4 102 aa13.74□□□□□ -0.21
COL6A2-201ENST00000300527 SLC25A13Q9UJS0 675 aa13.74□□□□□ -0.21
COL6A2-201ENST00000300527 KCNE3Q9Y6H6 103 aa13.74□□□□□ -0.21
COL6A2-201ENST00000300527 ZNF593O00488 134 aaPredicted RBP13.74□□□□□ -0.21
COL6A2-201ENST00000300527 LEFTY1O75610 366 aa13.74□□□□□ -0.21
COL6A2-201ENST00000300527 APOC3P02656 99 aa13.74□□□□□ -0.21
COL6A2-201ENST00000300527 GYPBP06028 91 aa13.74□□□□□ -0.21
COL6A2-201ENST00000300527 CHRM4P08173 479 aa13.74□□□□□ -0.21
COL6A2-201ENST00000300527 PTHLHP12272 177 aa13.74□□□□□ -0.21
COL6A2-201ENST00000300527 ZNF33BQ06732 778 aa13.74□□□□□ -0.21
COL6A2-201ENST00000300527 EOGTQ5NDL2 527 aa13.74□□□□□ -0.21
COL6A2-201ENST00000300527 PRAMEF14Q5SWL7 426 aa13.74□□□□□ -0.21
COL6A2-201ENST00000300527 PRAMEF13Q5VWM6 474 aa13.74□□□□□ -0.21
COL6A2-201ENST00000300527 CCDC116Q8IYX3 515 aa13.74□□□□□ -0.21
COL6A2-201ENST00000300527 CYB561A3Q8NBI2 242 aa13.74□□□□□ -0.21
COL6A2-201ENST00000300527 WDR89Q96FK6 387 aaPredicted RBP13.74□□□□□ -0.21
COL6A2-201ENST00000300527 FAIM2Q9BWQ8 316 aa13.74□□□□□ -0.21
COL6A2-201ENST00000300527 SAV1Q9H4B6 383 aaPredicted RBP13.74□□□□□ -0.21
COL6A2-201ENST00000300527 SOX30O94993 753 aa13.73□□□□□ -0.21
COL6A2-201ENST00000300527 GSTM3P21266 225 aa13.73□□□□□ -0.21
COL6A2-201ENST00000300527 CRHR2Q13324 411 aa13.73□□□□□ -0.21
COL6A2-201ENST00000300527 C1orf94Q6P1W5 598 aa13.73□□□□□ -0.21
COL6A2-201ENST00000300527 Q6ZTK2 550 aa13.73□□□□□ -0.21
COL6A2-201ENST00000300527 CXXC5Q7LFL8 322 aaKnown RBP13.73□□□□□ -0.21
COL6A2-201ENST00000300527 OAFQ86UD1 273 aa13.73□□□□□ -0.21
COL6A2-201ENST00000300527 GPALPP1Q8IXQ4 340 aa13.73□□□□□ -0.21
COL6A2-201ENST00000300527 MORN4Q8NDC4 146 aa13.73□□□□□ -0.21
COL6A2-201ENST00000300527 SLC45A1Q9Y2W3 748 aa13.73□□□□□ -0.21
COL6A2-201ENST00000300527 AK6Q9Y3D8 172 aaKnown RBP13.73□□□□□ -0.21
COL6A2-201ENST00000300527 ALPK3Q96L96 1907 aa13.73□□□□□ -0.21
COL6A2-201ENST00000300527 hCG_1807616A0A1W2PRN6 198 aa13.73□□□□□ -0.21
COL6A2-201ENST00000300527 GLTPD2A6NH11 291 aa13.73□□□□□ -0.21
COL6A2-201ENST00000300527 SLC9A3R1O14745 358 aaPredicted RBP13.73□□□□□ -0.21
COL6A2-201ENST00000300527 NPC1O15118 1278 aa13.73□□□□□ -0.21
COL6A2-201ENST00000300527 SMAD9O15198 467 aaKnown RBP13.73□□□□□ -0.21
COL6A2-201ENST00000300527 HOXD4P09016 255 aaPredicted RBP13.73□□□□□ -0.21
COL6A2-201ENST00000300527 PYCR1P32322 319 aa13.73□□□□□ -0.21
COL6A2-201ENST00000300527 RGS8P57771 180 aaPredicted RBP13.73□□□□□ -0.21
COL6A2-201ENST00000300527 C17orf107Q6ZR85 190 aa13.73□□□□□ -0.21
COL6A2-201ENST00000300527 ACBD7Q8N6N7 88 aa13.73□□□□□ -0.21
COL6A2-201ENST00000300527 ZNF433Q8N7K0 673 aaPredicted RBP13.73□□□□□ -0.21
COL6A2-201ENST00000300527 LSM14AQ8ND56 463 aaKnown RBP13.73□□□□□ -0.21
COL6A2-201ENST00000300527 OR9A1PQ8NGU1 263 aa13.73□□□□□ -0.21
COL6A2-201ENST00000300527 LHFPL5Q8TAF8 219 aa13.73□□□□□ -0.21
COL6A2-201ENST00000300527 GNPDA2Q8TDQ7 276 aa13.73□□□□□ -0.21
COL6A2-201ENST00000300527 TM4SF18Q96CE8 201 aa13.73□□□□□ -0.21
COL6A2-201ENST00000300527 METTL2AQ96IZ6 378 aaKnown RBP13.73□□□□□ -0.21
COL6A2-201ENST00000300527 RCE1Q9Y256 329 aa13.73□□□□□ -0.21
COL6A2-201ENST00000300527 H3BSH0 61 aa13.73□□□□□ -0.21
COL6A2-201ENST00000300527 KPNA3O00505 521 aaPredicted RBP13.73□□□□□ -0.21
COL6A2-201ENST00000300527 ARPC1BO15143 372 aaKnown RBP13.73□□□□□ -0.21
COL6A2-201ENST00000300527 OR1F1O43749 312 aa13.73□□□□□ -0.21
COL6A2-201ENST00000300527 TMPRSS11DO60235 418 aa13.73□□□□□ -0.21
COL6A2-201ENST00000300527 OR5F1O95221 314 aa13.73□□□□□ -0.21
COL6A2-201ENST00000300527 ELFN1P0C7U0 828 aa13.73□□□□□ -0.21
COL6A2-201ENST00000300527 IFNGR2P38484 337 aa13.73□□□□□ -0.21
COL6A2-201ENST00000300527 SSR2P43308 183 aa13.73□□□□□ -0.21
COL6A2-201ENST00000300527 VASNQ6EMK4 673 aa13.73□□□□□ -0.21
COL6A2-201ENST00000300527 PYHIN1Q6K0P9 492 aa13.73□□□□□ -0.21
COL6A2-201ENST00000300527 CD200R1LQ6Q8B3 271 aa13.73□□□□□ -0.21
COL6A2-201ENST00000300527 MEIOBQ8N635 442 aa13.73□□□□□ -0.21
COL6A2-201ENST00000300527 OR5W2Q8NH69 310 aa13.73□□□□□ -0.21
COL6A2-201ENST00000300527 GLYATL1Q969I3 302 aa13.73□□□□□ -0.21
COL6A2-201ENST00000300527 COL26A1Q96A83 441 aa13.73□□□□□ -0.21
COL6A2-201ENST00000300527 NARS2Q96I59 477 aaKnown RBP13.73□□□□□ -0.21
COL6A2-201ENST00000300527 PRRC1Q96M27 445 aa13.73□□□□□ -0.21
COL6A2-201ENST00000300527 RETREG1Q9H6L5 497 aa13.73□□□□□ -0.21
COL6A2-201ENST00000300527 WSB2Q9NYS7 404 aaPredicted RBP13.73□□□□□ -0.21
COL6A2-201ENST00000300527 ASB4Q9Y574 426 aa13.73□□□□□ -0.21
COL6A2-201ENST00000300527 PPM1BO75688 479 aa13.72□□□□□ -0.21
COL6A2-201ENST00000300527 SIX6O95475 246 aa13.72□□□□□ -0.21
COL6A2-201ENST00000300527 PRG2P13727 222 aa13.72□□□□□ -0.21
COL6A2-201ENST00000300527 POLR2LP62875 67 aaKnown RBP13.72□□□□□ -0.21
COL6A2-201ENST00000300527 FGL2Q14314 439 aa13.72□□□□□ -0.21
COL6A2-201ENST00000300527 GSG1Q2KHT4 349 aa13.72□□□□□ -0.21
COL6A2-201ENST00000300527 ZNF613Q6PF04 617 aa13.72□□□□□ -0.21
COL6A2-201ENST00000300527 C3P1Q6ZMU1 363 aa13.72□□□□□ -0.21
COL6A2-201ENST00000300527 BOLLQ8N9W6 283 aaKnown RBP13.72□□□□□ -0.21
COL6A2-201ENST00000300527 OR5AR1Q8NGP9 310 aa13.72□□□□□ -0.21
COL6A2-201ENST00000300527 TOE1Q96GM8 510 aaKnown RBP13.72□□□□□ -0.21
COL6A2-201ENST00000300527 ZNF436Q9C0F3 470 aaPredicted RBP13.72□□□□□ -0.21
COL6A2-201ENST00000300527 SIRT3Q9NTG7 399 aaPredicted RBP13.72□□□□□ -0.21
COL6A2-201ENST00000300527 BABAM2Q9NXR7 383 aa13.72□□□□□ -0.21
COL6A2-201ENST00000300527 SCP2D1Q9UJQ7 156 aa13.72□□□□□ -0.21
COL6A2-201ENST00000300527 FXYD6-FXYD2A0A087WZ82 144 aa13.72□□□□□ -0.21
COL6A2-201ENST00000300527 A0A1W2PS29 197 aa13.72□□□□□ -0.21
COL6A2-201ENST00000300527 C7orf66A4D0T2 115 aa13.72□□□□□ -0.21
COL6A2-201ENST00000300527 ARPC5O15511 151 aa13.72□□□□□ -0.21
COL6A2-201ENST00000300527 IFNA16P05015 189 aa13.72□□□□□ -0.21
COL6A2-201ENST00000300527 HMGN2P05204 90 aaKnown RBP13.72□□□□□ -0.21
COL6A2-201ENST00000300527 ELAVL2Q12926 359 aaKnown RBP13.72□□□□□ -0.21
COL6A2-201ENST00000300527 RNLSQ5VYX0 342 aa13.72□□□□□ -0.21
COL6A2-201ENST00000300527 C2orf69Q8N8R5 385 aa13.72□□□□□ -0.21
COL6A2-201ENST00000300527 OR51L1Q8NGJ5 315 aa13.72□□□□□ -0.21
COL6A2-201ENST00000300527 TMEM255BQ8WV15 326 aa13.72□□□□□ -0.21
COL6A2-201ENST00000300527 ACOT12Q8WYK0 555 aa13.72□□□□□ -0.21
COL6A2-201ENST00000300527 LYSMD1Q96S90 227 aa13.72□□□□□ -0.21
COL6A2-201ENST00000300527 ZCCHC2Q9C0B9 1178 aaKnown RBP13.72□□□□□ -0.21
COL6A2-201ENST00000300527 FXYD6Q9H0Q3 95 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms