RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 NT5EP21589 574 aa19.37■□□□□ 0.69
SMCO4-201ENST00000298966 PSMA4P25789 261 aaKnown RBP19.37■□□□□ 0.69
SMCO4-201ENST00000298966 MC3RP41968 323 aa19.37■□□□□ 0.69
SMCO4-201ENST00000298966 DUSP2Q05923 314 aa19.37■□□□□ 0.69
SMCO4-201ENST00000298966 PRICKLE4Q2TBC4 344 aa19.37■□□□□ 0.69
SMCO4-201ENST00000298966 TMEM107Q6UX40 140 aa19.37■□□□□ 0.69
SMCO4-201ENST00000298966 PTOV1Q86YD1 416 aa19.37■□□□□ 0.69
SMCO4-201ENST00000298966 BEST3Q8N1M1 668 aa19.37■□□□□ 0.69
SMCO4-201ENST00000298966 C10orf111Q8N326 155 aa19.37■□□□□ 0.69
SMCO4-201ENST00000298966 AMER2Q8N7J2 671 aa19.37■□□□□ 0.69
SMCO4-201ENST00000298966 TMEM178AQ8NBL3 297 aa19.37■□□□□ 0.69
SMCO4-201ENST00000298966 FAM98AQ8NCA5 519 aaKnown RBP19.37■□□□□ 0.69
SMCO4-201ENST00000298966 NUP43Q8NFH3 380 aa19.37■□□□□ 0.69
SMCO4-201ENST00000298966 PNPT1Q8TCS8 783 aaKnown RBP19.37■□□□□ 0.69
SMCO4-201ENST00000298966 CTHRC1Q96CG8 243 aa19.37■□□□□ 0.69
SMCO4-201ENST00000298966 DGAT2Q96PD7 388 aa19.37■□□□□ 0.69
SMCO4-201ENST00000298966 VKORC1Q9BQB6 163 aa19.37■□□□□ 0.69
SMCO4-201ENST00000298966 UTP23Q9BRU9 249 aaKnown RBP19.37■□□□□ 0.69
SMCO4-201ENST00000298966 A4GALTQ9NPC4 353 aa19.37■□□□□ 0.69
SMCO4-201ENST00000298966 CCM2LQ9NUG4 571 aaPredicted RBP19.37■□□□□ 0.69
SMCO4-201ENST00000298966 ARMC1Q9NVT9 282 aa19.37■□□□□ 0.69
SMCO4-201ENST00000298966 ANGPT4Q9Y264 503 aa19.37■□□□□ 0.69
SMCO4-201ENST00000298966 AP4S1Q9Y587 144 aa19.37■□□□□ 0.69
SMCO4-201ENST00000298966 PRRG2O14669 202 aa19.36■□□□□ 0.69
SMCO4-201ENST00000298966 SEC24DO94855 1032 aaPredicted RBP19.36■□□□□ 0.69
SMCO4-201ENST00000298966 BAG2O95816 211 aa19.36■□□□□ 0.69
SMCO4-201ENST00000298966 IFNA14P01570 189 aa19.36■□□□□ 0.69
SMCO4-201ENST00000298966 CD46P15529 392 aa19.36■□□□□ 0.69
SMCO4-201ENST00000298966 NCK1P16333 377 aa19.36■□□□□ 0.69
SMCO4-201ENST00000298966 HOXB4P17483 251 aaPredicted RBP19.36■□□□□ 0.69
SMCO4-201ENST00000298966 MATN1P21941 496 aa19.36■□□□□ 0.69
SMCO4-201ENST00000298966 TUBA3CQ13748 450 aa19.36■□□□□ 0.69
SMCO4-201ENST00000298966 BTBD16Q32M84 506 aa19.36■□□□□ 0.69
SMCO4-201ENST00000298966 ZNF750Q32MQ0 723 aa19.36■□□□□ 0.69
SMCO4-201ENST00000298966 ACER2Q5QJU3 275 aa19.36■□□□□ 0.69
SMCO4-201ENST00000298966 PRAMEF8Q5VWM4 474 aa19.36■□□□□ 0.69
SMCO4-201ENST00000298966 PRAMEF7Q5VXH5 474 aa19.36■□□□□ 0.69
SMCO4-201ENST00000298966 FCRLBQ6BAA4 426 aa19.36■□□□□ 0.69
SMCO4-201ENST00000298966 TUBA3EQ6PEY2 450 aa19.36■□□□□ 0.69
SMCO4-201ENST00000298966 LRRC74BQ6ZQY2 392 aa19.36■□□□□ 0.69
SMCO4-201ENST00000298966 ZC3H7AQ8IWR0 971 aaKnown RBP19.36■□□□□ 0.69
SMCO4-201ENST00000298966 OR4N5Q8IXE1 308 aa19.36■□□□□ 0.69
SMCO4-201ENST00000298966 GALNT12Q8IXK2 581 aa19.36■□□□□ 0.69
SMCO4-201ENST00000298966 ADGRG5Q8IZF4 528 aa19.36■□□□□ 0.69
SMCO4-201ENST00000298966 LGI4Q8N135 537 aa19.36■□□□□ 0.69
SMCO4-201ENST00000298966 GHDCQ8N2G8 530 aa19.36■□□□□ 0.69
SMCO4-201ENST00000298966 PQLC1Q8N2U9 271 aa19.36■□□□□ 0.69
SMCO4-201ENST00000298966 MDS2Q8NDY4 140 aa19.36■□□□□ 0.69
SMCO4-201ENST00000298966 FIG4Q92562 907 aa19.36■□□□□ 0.69
SMCO4-201ENST00000298966 NCLNQ969V3 563 aa19.36■□□□□ 0.69
SMCO4-201ENST00000298966 FAM162AQ96A26 154 aa19.36■□□□□ 0.69
SMCO4-201ENST00000298966 SIGLEC12Q96PQ1 595 aa19.36■□□□□ 0.69
SMCO4-201ENST00000298966 UGT2B28Q9BY64 529 aa19.36■□□□□ 0.69
SMCO4-201ENST00000298966 ACTRT3Q9BYD9 372 aa19.36■□□□□ 0.69
SMCO4-201ENST00000298966 HES7Q9BYE0 225 aa19.36■□□□□ 0.69
SMCO4-201ENST00000298966 ALOXE3Q9BYJ1 711 aa19.36■□□□□ 0.69
SMCO4-201ENST00000298966 GIN1Q9NXP7 522 aa19.36■□□□□ 0.69
SMCO4-201ENST00000298966 MAT2BQ9NZL9 334 aa19.36■□□□□ 0.69
SMCO4-201ENST00000298966 P2RX2Q9UBL9 471 aa19.36■□□□□ 0.69
SMCO4-201ENST00000298966 RPS6KA6Q9UK32 745 aa19.36■□□□□ 0.69
SMCO4-201ENST00000298966 SAMD4AQ9UPU9 718 aaKnown RBP19.36■□□□□ 0.69
SMCO4-201ENST00000298966 LIPT1Q9Y234 373 aa19.36■□□□□ 0.69
SMCO4-201ENST00000298966 MAP1AP78559 2803 aaPredicted RBP19.36■□□□□ 0.69
SMCO4-201ENST00000298966 PDE9AO76083 593 aa19.35■□□□□ 0.69
SMCO4-201ENST00000298966 ETFAP13804 333 aa19.35■□□□□ 0.69
SMCO4-201ENST00000298966 PTDSS1P48651 473 aaKnown RBP19.35■□□□□ 0.69
SMCO4-201ENST00000298966 CDK6Q00534 326 aa19.35■□□□□ 0.69
SMCO4-201ENST00000298966 OR1C1Q15619 314 aa19.35■□□□□ 0.69
SMCO4-201ENST00000298966 ADRM1Q16186 407 aa19.35■□□□□ 0.69
SMCO4-201ENST00000298966 SYT16Q17RD7 645 aa19.35■□□□□ 0.69
SMCO4-201ENST00000298966 RNF111Q6ZNA4 994 aa19.35■□□□□ 0.69
SMCO4-201ENST00000298966 CCDC80Q76M96 950 aa19.35■□□□□ 0.69
SMCO4-201ENST00000298966 SZRD1Q7Z422 152 aa19.35■□□□□ 0.69
SMCO4-201ENST00000298966 DOLPP1Q86YN1 238 aa19.35■□□□□ 0.69
SMCO4-201ENST00000298966 CLEC4FQ8N1N0 589 aa19.35■□□□□ 0.69
SMCO4-201ENST00000298966 PAPD5Q8NDF8 572 aaKnown RBP19.35■□□□□ 0.69
SMCO4-201ENST00000298966 PLPP5Q8NEB5 264 aa19.35■□□□□ 0.69
SMCO4-201ENST00000298966 SLCO4A1Q96BD0 722 aa19.35■□□□□ 0.69
SMCO4-201ENST00000298966 SCMH1Q96GD3 660 aa19.35■□□□□ 0.69
SMCO4-201ENST00000298966 FRMD6Q96NE9 622 aa19.35■□□□□ 0.69
SMCO4-201ENST00000298966 DMRTA2Q96SC8 542 aa19.35■□□□□ 0.69
SMCO4-201ENST00000298966 TMUB1Q9BVT8 246 aa19.35■□□□□ 0.69
SMCO4-201ENST00000298966 YY1AP1Q9H869 796 aa19.35■□□□□ 0.69
SMCO4-201ENST00000298966 CXorf21Q9HAI6 301 aa19.35■□□□□ 0.69
SMCO4-201ENST00000298966 CALML5Q9NZT1 146 aa19.35■□□□□ 0.69
SMCO4-201ENST00000298966 C19orf25Q9UFG5 118 aaPredicted RBP19.35■□□□□ 0.69
SMCO4-201ENST00000298966 PCDHGB3Q9Y5G1 929 aa19.35■□□□□ 0.69
SMCO4-201ENST00000298966 ACANP16112 2415 aa19.34■□□□□ 0.69
SMCO4-201ENST00000298966 IGKV3D-11A0A0A0MRZ8 115 aa19.34■□□□□ 0.69
SMCO4-201ENST00000298966 UPK1AO00322 258 aa19.34■□□□□ 0.69
SMCO4-201ENST00000298966 CASQ2O14958 399 aaPredicted RBP19.34■□□□□ 0.69
SMCO4-201ENST00000298966 HMGN2P05204 90 aaKnown RBP19.34■□□□□ 0.69
SMCO4-201ENST00000298966 FCGR1AP12314 374 aa19.34■□□□□ 0.69
SMCO4-201ENST00000298966 CD96P40200 585 aa19.34■□□□□ 0.69
SMCO4-201ENST00000298966 VHLP40337 213 aa19.34■□□□□ 0.69
SMCO4-201ENST00000298966 SCARB2Q14108 478 aa19.34■□□□□ 0.69
SMCO4-201ENST00000298966 MEP1AQ16819 746 aa19.34■□□□□ 0.69
SMCO4-201ENST00000298966 COX20Q5RI15 118 aa19.34■□□□□ 0.69
SMCO4-201ENST00000298966 PLAG1Q6DJT9 500 aa19.34■□□□□ 0.69
SMCO4-201ENST00000298966 H3F3CQ6NXT2 135 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms