RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 FTHL17Q9BXU8 183 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 KCNH6Q9H252 994 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 MARCH2Q9P0N8 246 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 GABARAPH6UMI1 98 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 CYB561D2O14569 222 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 FFAR2O15552 330 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 UGDHO60701 494 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 ADAM23O75077 832 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 ADAM11O75078 769 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 GABARAPO95166 117 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 F2P00734 622 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 GNB3P16520 340 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 PRKCHP24723 683 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 PTTG1IPP53801 180 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 JAM2P57087 298 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 GTF2BQ00403 316 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 IL24Q13007 206 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 MAP2K5Q13163 448 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 RCAN2Q14206 197 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 COL5A1-AS1Q5SY13 56 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 B3GNT9Q6UX72 402 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 ABI3BPQ7Z7G0 1075 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 LSMEM1Q8N8F7 131 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 ZNF439Q8NDP4 499 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 METTL21AQ8WXB1 218 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 PSMF1Q92530 271 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 EDAQ92838 391 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 YIPF5Q969M3 257 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 MAP6Q96JE9 813 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 MMP19Q99542 508 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 PIGVQ9NUD9 493 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 UBE2J1Q9Y385 318 aaPredicted RBP4.61□□□□□ -1.67
CSMD3-201ENST00000297405 HLA-DOBP13765 273 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 KRTDAPP60985 99 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 TAF1AQ15573 450 aaPredicted RBP4.61□□□□□ -1.67
CSMD3-201ENST00000297405 MSS51Q4VC12 460 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 PDLIM3Q53GG5 364 aaPredicted RBP4.61□□□□□ -1.67
CSMD3-201ENST00000297405 YIF1BQ5BJH7 314 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 PRR27Q6MZM9 219 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 TBPL2Q6SJ96 375 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 FBXO15Q8NCQ5 510 aaPredicted RBP4.61□□□□□ -1.67
CSMD3-201ENST00000297405 OR4E2Q8NGC2 313 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 SPRYD4Q8WW59 207 aaPredicted RBP4.61□□□□□ -1.67
CSMD3-201ENST00000297405 IL12RB2Q99665 862 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 DERL2Q9GZP9 239 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 SPNS1Q9H2V7 528 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 FBXW11Q9UKB1 542 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 F5H423 210 aaPredicted RBP4.61□□□□□ -1.67
CSMD3-201ENST00000297405 M0R2Z0 102 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 CD86P42081 329 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 TOMM34Q15785 309 aaPredicted RBP4.61□□□□□ -1.67
CSMD3-201ENST00000297405 MEP1BQ16820 701 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 CEACAM19Q7Z692 300 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 ZNF547Q8IVP9 402 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 CCDC116Q8IYX3 515 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 ZNF680Q8NEM1 530 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 OR52J3Q8NH60 311 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 SAT2Q96F10 170 aaPredicted RBP4.61□□□□□ -1.67
CSMD3-201ENST00000297405 DCLRE1CQ96SD1 692 aaKnown RBP4.61□□□□□ -1.67
CSMD3-201ENST00000297405 TSSK6Q9BXA6 273 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 BANF2Q9H503 90 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 LIN7CQ9NUP9 197 aaKnown RBP4.61□□□□□ -1.67
CSMD3-201ENST00000297405 PNPOQ9NVS9 261 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 ERVK13-1Q9NX77 482 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 DTLQ9NZJ0 730 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 PCDHGA9Q9Y5G4 932 aaKnown RBP4.61□□□□□ -1.67
CSMD3-201ENST00000297405 XIRP1Q702N8 1843 aaKnown RBP4.6□□□□□ -1.67
CSMD3-201ENST00000297405 B4GALT4O60513 344 aa4.6□□□□□ -1.67
CSMD3-201ENST00000297405 AQP8O94778 261 aa4.6□□□□□ -1.67
CSMD3-201ENST00000297405 OAS1P00973 400 aaKnown RBP4.6□□□□□ -1.67
CSMD3-201ENST00000297405 TFAP2AP05549 437 aa4.6□□□□□ -1.67
CSMD3-201ENST00000297405 OR5H8P0DN80 308 aa4.6□□□□□ -1.67
CSMD3-201ENST00000297405 GRM5P41594 1212 aa4.6□□□□□ -1.67
CSMD3-201ENST00000297405 CLCNKBP51801 687 aa4.6□□□□□ -1.67
CSMD3-201ENST00000297405 SEC61A1P61619 476 aaKnown RBP4.6□□□□□ -1.67
CSMD3-201ENST00000297405 CBX2Q14781 532 aaPredicted RBP4.6□□□□□ -1.67
CSMD3-201ENST00000297405 OR6F1Q8NGZ6 308 aa4.6□□□□□ -1.67
CSMD3-201ENST00000297405 CRB3Q9BUF7 120 aa4.6□□□□□ -1.67
CSMD3-201ENST00000297405 SLC6A20Q9NP91 592 aa4.6□□□□□ -1.67
CSMD3-201ENST00000297405 PTPRMP28827 1452 aa4.6□□□□□ -1.67
CSMD3-201ENST00000297405 OPN1MWP04001 364 aa4.6□□□□□ -1.67
CSMD3-201ENST00000297405 OPN1MW2P0DN77 364 aa4.6□□□□□ -1.67
CSMD3-201ENST00000297405 OPN1MW3P0DN78 364 aa4.6□□□□□ -1.67
CSMD3-201ENST00000297405 SOX18P35713 384 aa4.6□□□□□ -1.67
CSMD3-201ENST00000297405 ZP2Q05996 745 aa4.6□□□□□ -1.67
CSMD3-201ENST00000297405 SLC18B1Q6NT16 456 aa4.6□□□□□ -1.67
CSMD3-201ENST00000297405 ISLR2Q6UXK2 745 aa4.6□□□□□ -1.67
CSMD3-201ENST00000297405 METTL9Q9H1A3 318 aa4.6□□□□□ -1.67
CSMD3-201ENST00000297405 ASB6Q9NWX5 421 aa4.6□□□□□ -1.67
CSMD3-201ENST00000297405 RASL12Q9NYN1 266 aa4.6□□□□□ -1.67
CSMD3-201ENST00000297405 TNFSF13BQ9Y275 285 aa4.6□□□□□ -1.67
CSMD3-201ENST00000297405 PXDNQ92626 1479 aa4.6□□□□□ -1.67
CSMD3-201ENST00000297405 ZNF726A6NNF4 738 aa4.6□□□□□ -1.67
CSMD3-201ENST00000297405 FAM163BP0C2L3 166 aa4.6□□□□□ -1.67
CSMD3-201ENST00000297405 OR4E1P0C645 316 aa4.6□□□□□ -1.67
CSMD3-201ENST00000297405 SFT2D3Q587I9 215 aa4.6□□□□□ -1.67
CSMD3-201ENST00000297405 TRNP1Q6NT89 227 aa4.6□□□□□ -1.67
CSMD3-201ENST00000297405 FBXL19Q6PCT2 694 aa4.6□□□□□ -1.67
CSMD3-201ENST00000297405 ARFGAP1Q8N6T3 406 aa4.6□□□□□ -1.67
CSMD3-201ENST00000297405 BIRC7Q96CA5 298 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms