RNA–Protein interactions for RNA: ENST00000294053.7

CLPB-201, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLPB, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-201ENST00000294053 MEDAGQ5VYS4 303 aa11.29□□□□□ -0.6
CLPB-201ENST00000294053 SLC7A13Q8TCU3 470 aa11.29□□□□□ -0.6
CLPB-201ENST00000294053 FOPNLQ96NB1 174 aa11.29□□□□□ -0.6
CLPB-201ENST00000294053 ZNF582Q96NG8 517 aaPredicted RBP11.29□□□□□ -0.6
CLPB-201ENST00000294053 SORCS2Q96PQ0 1159 aa11.29□□□□□ -0.6
CLPB-201ENST00000294053 CHST8Q9H2A9 424 aa11.29□□□□□ -0.6
CLPB-201ENST00000294053 PCDHB16Q9NRJ7 776 aa11.29□□□□□ -0.6
CLPB-201ENST00000294053 COPS3Q9UNS2 423 aa11.29□□□□□ -0.6
CLPB-201ENST00000294053 CORO2BQ9UQ03 480 aa11.29□□□□□ -0.6
CLPB-201ENST00000294053 RASD1Q9Y272 281 aa11.29□□□□□ -0.6
CLPB-201ENST00000294053 A0A1W2PRB8 838 aa11.29□□□□□ -0.6
CLPB-201ENST00000294053 NPIPB8E9PQR5 432 aa11.29□□□□□ -0.6
CLPB-201ENST00000294053 SMAD9O15198 467 aaKnown RBP11.29□□□□□ -0.6
CLPB-201ENST00000294053 EFCAB14O75071 495 aa11.29□□□□□ -0.6
CLPB-201ENST00000294053 CPEP16870 476 aa11.29□□□□□ -0.6
CLPB-201ENST00000294053 PPIBP23284 216 aaKnown RBP11.29□□□□□ -0.6
CLPB-201ENST00000294053 SHC1P29353 583 aa11.29□□□□□ -0.6
CLPB-201ENST00000294053 MVDP53602 400 aa11.29□□□□□ -0.6
CLPB-201ENST00000294053 ZNF234Q14588 700 aa11.29□□□□□ -0.6
CLPB-201ENST00000294053 GAB4Q2WGN9 574 aa11.29□□□□□ -0.6
CLPB-201ENST00000294053 TMEM240Q5SV17 173 aa11.29□□□□□ -0.6
CLPB-201ENST00000294053 MED27Q6P2C8 311 aa11.29□□□□□ -0.6
CLPB-201ENST00000294053 LRFN4Q6PJG9 635 aa11.29□□□□□ -0.6
CLPB-201ENST00000294053 SECISBP2Q96T21 854 aaKnown RBP11.29□□□□□ -0.6
CLPB-201ENST00000294053 MARK1Q9P0L2 795 aa11.29□□□□□ -0.6
CLPB-201ENST00000294053 NFKBIL1Q9UBC1 381 aaPredicted RBP11.29□□□□□ -0.6
CLPB-201ENST00000294053 PFDN2Q9UHV9 154 aa11.29□□□□□ -0.6
CLPB-201ENST00000294053 hCG_1807616A0A1W2PRN6 198 aa11.28□□□□□ -0.6
CLPB-201ENST00000294053 GPR171O14626 319 aa11.28□□□□□ -0.6
CLPB-201ENST00000294053 UGDHO60701 494 aa11.28□□□□□ -0.6
CLPB-201ENST00000294053 EIF4EP06730 217 aaKnown RBP11.28□□□□□ -0.6
CLPB-201ENST00000294053 ADRB3P13945 408 aa11.28□□□□□ -0.6
CLPB-201ENST00000294053 SLC6A1P30531 599 aa11.28□□□□□ -0.6
CLPB-201ENST00000294053 BUD31P41223 144 aaPredicted RBP11.28□□□□□ -0.6
CLPB-201ENST00000294053 GIPRP48546 466 aa11.28□□□□□ -0.6
CLPB-201ENST00000294053 SELENOPP49908 381 aa11.28□□□□□ -0.6
CLPB-201ENST00000294053 CNTN1Q12860 1018 aa11.28□□□□□ -0.6
CLPB-201ENST00000294053 OPCMLQ14982 345 aa11.28□□□□□ -0.6
CLPB-201ENST00000294053 ST3GAL2Q16842 350 aa11.28□□□□□ -0.6
CLPB-201ENST00000294053 FAM78AQ5JUQ0 283 aa11.28□□□□□ -0.6
CLPB-201ENST00000294053 CLLU1Q5K131 121 aa11.28□□□□□ -0.6
CLPB-201ENST00000294053 SLC25A25Q6KCM7 469 aa11.28□□□□□ -0.6
CLPB-201ENST00000294053 SMARCD3Q6STE5 483 aa11.28□□□□□ -0.6
CLPB-201ENST00000294053 SIAH3Q8IW03 269 aa11.28□□□□□ -0.6
CLPB-201ENST00000294053 GPALPP1Q8IXQ4 340 aa11.28□□□□□ -0.6
CLPB-201ENST00000294053 TIFAQ96CG3 184 aa11.28□□□□□ -0.6
CLPB-201ENST00000294053 ABHD1Q96SE0 405 aa11.28□□□□□ -0.6
CLPB-201ENST00000294053 KCNK12Q9HB15 430 aa11.28□□□□□ -0.6
CLPB-201ENST00000294053 CNIH4Q9P003 139 aa11.28□□□□□ -0.6
CLPB-201ENST00000294053 ASF1AQ9Y294 204 aa11.28□□□□□ -0.6
CLPB-201ENST00000294053 C2orf16Q68DN1 1984 aa11.28□□□□□ -0.6
CLPB-201ENST00000294053 A0A0G2JN53 185 aa11.28□□□□□ -0.6
CLPB-201ENST00000294053 FEZF1A0PJY2 475 aa11.28□□□□□ -0.6
CLPB-201ENST00000294053 FRS3O43559 492 aa11.28□□□□□ -0.6
CLPB-201ENST00000294053 SLC28A2O43868 658 aa11.28□□□□□ -0.6
CLPB-201ENST00000294053 HPXP02790 462 aa11.28□□□□□ -0.6
CLPB-201ENST00000294053 HLA-DPB1P04440 258 aa11.28□□□□□ -0.6
CLPB-201ENST00000294053 H2AFB2P0C5Z0 115 aa11.28□□□□□ -0.6
CLPB-201ENST00000294053 DDX6P26196 483 aaKnown RBP eCLIP11.28□□□□□ -0.6
CLPB-201ENST00000294053 KCNC3Q14003 757 aa11.28□□□□□ -0.6
CLPB-201ENST00000294053 ATRAIDQ6UW56 229 aa11.28□□□□□ -0.6
CLPB-201ENST00000294053 C3P1Q6ZMU1 363 aa11.28□□□□□ -0.6
CLPB-201ENST00000294053 ETFBKMTQ8IXQ9 262 aa11.28□□□□□ -0.6
CLPB-201ENST00000294053 OR51G2Q8NGK0 314 aa11.28□□□□□ -0.6
CLPB-201ENST00000294053 SMAP2Q8WU79 429 aaPredicted RBP11.28□□□□□ -0.6
CLPB-201ENST00000294053 SPRYD4Q8WW59 207 aaPredicted RBP11.28□□□□□ -0.6
CLPB-201ENST00000294053 KLK6Q92876 244 aa11.28□□□□□ -0.6
CLPB-201ENST00000294053 ZNF416Q9BWM5 594 aa11.28□□□□□ -0.6
CLPB-201ENST00000294053 GSDMCQ9BYG8 508 aa11.28□□□□□ -0.6
CLPB-201ENST00000294053 THSD1Q9NS62 852 aa11.28□□□□□ -0.6
CLPB-201ENST00000294053 H2AFY2Q9P0M6 372 aaPredicted RBP11.28□□□□□ -0.6
CLPB-201ENST00000294053 PDCD5O14737 125 aa11.28□□□□□ -0.6
CLPB-201ENST00000294053 PPM1DO15297 605 aa11.28□□□□□ -0.6
CLPB-201ENST00000294053 ARPC5O15511 151 aa11.28□□□□□ -0.6
CLPB-201ENST00000294053 CBX7O95931 251 aa11.28□□□□□ -0.6
CLPB-201ENST00000294053 ACSL1P33121 698 aa11.28□□□□□ -0.6
CLPB-201ENST00000294053 CDH11P55287 796 aa11.28□□□□□ -0.6
CLPB-201ENST00000294053 ZNF33BQ06732 778 aa11.28□□□□□ -0.6
CLPB-201ENST00000294053 SNTB2Q13425 540 aaKnown RBP11.28□□□□□ -0.6
CLPB-201ENST00000294053 TCTE1Q5JU00 501 aa11.28□□□□□ -0.6
CLPB-201ENST00000294053 SLC30A6Q6NXT4 461 aa11.28□□□□□ -0.6
CLPB-201ENST00000294053 ZNF687Q8N1G0 1237 aa11.28□□□□□ -0.6
CLPB-201ENST00000294053 KLHL15Q96M94 604 aa11.28□□□□□ -0.6
CLPB-201ENST00000294053 ZDHHC5Q9C0B5 715 aa11.28□□□□□ -0.6
CLPB-201ENST00000294053 DMRT3Q9NQL9 472 aa11.28□□□□□ -0.6
CLPB-201ENST00000294053 CUEDC1Q9NWM3 386 aaPredicted RBP11.28□□□□□ -0.6
CLPB-201ENST00000294053 DIMT1Q9UNQ2 313 aaKnown RBP11.28□□□□□ -0.6
CLPB-201ENST00000294053 BRWD1Q9NSI6 2320 aa11.27□□□□□ -0.6
CLPB-201ENST00000294053 VPS13AQ96RL7 3174 aa11.27□□□□□ -0.6
CLPB-201ENST00000294053 KIF26AQ9ULI4 1882 aaPredicted RBP11.27□□□□□ -0.6
CLPB-201ENST00000294053 FXYD6-FXYD2A0A087WZ82 144 aa11.27□□□□□ -0.61
CLPB-201ENST00000294053 TBX6O95947 436 aaPredicted RBP11.27□□□□□ -0.61
CLPB-201ENST00000294053 ADAP00813 363 aa11.27□□□□□ -0.61
CLPB-201ENST00000294053 TFP02787 698 aa11.27□□□□□ -0.61
CLPB-201ENST00000294053 SRPRAP08240 638 aaKnown RBP11.27□□□□□ -0.61
CLPB-201ENST00000294053 TFPIP10646 304 aa11.27□□□□□ -0.61
CLPB-201ENST00000294053 ELAVL4P26378 380 aaKnown RBP11.27□□□□□ -0.61
CLPB-201ENST00000294053 LGALS3BPQ08380 585 aa11.27□□□□□ -0.61
CLPB-201ENST00000294053 PODNL1Q6PEZ8 512 aa11.27□□□□□ -0.61
CLPB-201ENST00000294053 LRRTM4Q86VH4 590 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms