RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 ZFP41Q8N8Y5 198 aa12.05□□□□□ -0.48
PTCD1-201ENST00000292478 ASB15Q8WXK1 588 aa12.05□□□□□ -0.48
PTCD1-201ENST00000292478 HHIPL1Q96JK4 782 aa12.05□□□□□ -0.48
PTCD1-201ENST00000292478 ZFP57Q9NU63 452 aa12.05□□□□□ -0.48
PTCD1-201ENST00000292478 ZNF701Q9NV72 531 aaPredicted RBP12.05□□□□□ -0.48
PTCD1-201ENST00000292478 ANKRD36CQ5JPF3 1778 aa12.05□□□□□ -0.48
PTCD1-201ENST00000292478 C17orf105B2RV13 164 aa12.05□□□□□ -0.48
PTCD1-201ENST00000292478 LATO43561 262 aa12.05□□□□□ -0.48
PTCD1-201ENST00000292478 UPK1BO75841 260 aa12.05□□□□□ -0.48
PTCD1-201ENST00000292478 PITPNBP48739 271 aa12.05□□□□□ -0.48
PTCD1-201ENST00000292478 MECP2P51608 486 aaKnown RBP12.05□□□□□ -0.48
PTCD1-201ENST00000292478 NFATC4Q14934 902 aa12.05□□□□□ -0.48
PTCD1-201ENST00000292478 TBCEQ15813 527 aaPredicted RBP12.05□□□□□ -0.48
PTCD1-201ENST00000292478 C6orf132Q5T0Z8 1188 aa12.05□□□□□ -0.48
PTCD1-201ENST00000292478 USP53Q70EK8 1073 aa12.05□□□□□ -0.48
PTCD1-201ENST00000292478 LSMEM2Q8N112 164 aa12.05□□□□□ -0.48
PTCD1-201ENST00000292478 THAP3Q8WTV1 239 aaPredicted RBP12.05□□□□□ -0.48
PTCD1-201ENST00000292478 FGF13Q92913 245 aa12.05□□□□□ -0.48
PTCD1-201ENST00000292478 C7orf50Q9BRJ6 194 aaKnown RBP12.05□□□□□ -0.48
PTCD1-201ENST00000292478 TP63Q9H3D4 680 aaPredicted RBP12.05□□□□□ -0.48
PTCD1-201ENST00000292478 SAGE1Q9NXZ1 904 aa12.05□□□□□ -0.48
PTCD1-201ENST00000292478 DCAF7P61962 342 aa12.05□□□□□ -0.48
PTCD1-201ENST00000292478 YPEL5P62699 121 aa12.05□□□□□ -0.48
PTCD1-201ENST00000292478 ZNF100Q8IYN0 542 aa12.05□□□□□ -0.48
PTCD1-201ENST00000292478 B3GNT7Q8NFL0 401 aa12.05□□□□□ -0.48
PTCD1-201ENST00000292478 TRMT10AQ8TBZ6 339 aaKnown RBP12.05□□□□□ -0.48
PTCD1-201ENST00000292478 OR52A4PA6NMU1 304 aa12.05□□□□□ -0.48
PTCD1-201ENST00000292478 PPP6CO00743 305 aa12.05□□□□□ -0.48
PTCD1-201ENST00000292478 FBP2O00757 339 aa12.05□□□□□ -0.48
PTCD1-201ENST00000292478 MAS1P04201 325 aa12.05□□□□□ -0.48
PTCD1-201ENST00000292478 ZNF43P17038 809 aa12.05□□□□□ -0.48
PTCD1-201ENST00000292478 PGBD5Q8N414 524 aa12.05□□□□□ -0.48
PTCD1-201ENST00000292478 TMEM163Q8TC26 289 aa12.05□□□□□ -0.48
PTCD1-201ENST00000292478 MSLNLQ96KJ4 702 aa12.05□□□□□ -0.48
PTCD1-201ENST00000292478 NECAB3Q96P71 396 aaPredicted RBP12.05□□□□□ -0.48
PTCD1-201ENST00000292478 FTSJ1Q9UET6 329 aa12.05□□□□□ -0.48
PTCD1-201ENST00000292478 M0R129 80 aa12.05□□□□□ -0.48
PTCD1-201ENST00000292478 HOXB9P17482 250 aaPredicted RBP12.05□□□□□ -0.48
PTCD1-201ENST00000292478 LHCGRP22888 699 aa12.05□□□□□ -0.48
PTCD1-201ENST00000292478 GABRB3P28472 473 aa12.05□□□□□ -0.48
PTCD1-201ENST00000292478 GNRHRP30968 328 aa12.05□□□□□ -0.48
PTCD1-201ENST00000292478 TRIM46Q7Z4K8 759 aa12.05□□□□□ -0.48
PTCD1-201ENST00000292478 MCATQ8IVS2 390 aaKnown RBP12.05□□□□□ -0.48
PTCD1-201ENST00000292478 ZNF709Q8N972 641 aa12.05□□□□□ -0.48
PTCD1-201ENST00000292478 ZSCAN1Q8NBB4 408 aa12.05□□□□□ -0.48
PTCD1-201ENST00000292478 DRAXINQ8NBI3 349 aaPredicted RBP12.05□□□□□ -0.48
PTCD1-201ENST00000292478 OR5J2Q8NH18 312 aa12.05□□□□□ -0.48
PTCD1-201ENST00000292478 SAP130Q9H0E3 1048 aa12.05□□□□□ -0.48
PTCD1-201ENST00000292478 POT1Q9NUX5 634 aa12.05□□□□□ -0.48
PTCD1-201ENST00000292478 CNIH4Q9P003 139 aa12.05□□□□□ -0.48
PTCD1-201ENST00000292478 KLF15Q9UIH9 416 aa12.05□□□□□ -0.48
PTCD1-201ENST00000292478 SPRED1Q7Z699 444 aa12.04□□□□□ -0.48
PTCD1-201ENST00000292478 PNPLA1Q8N8W4 532 aa12.04□□□□□ -0.48
PTCD1-201ENST00000292478 GPR148Q8TDV2 347 aa12.04□□□□□ -0.48
PTCD1-201ENST00000292478 SLC6A7Q99884 636 aa12.04□□□□□ -0.48
PTCD1-201ENST00000292478 THSD1Q9NS62 852 aa12.04□□□□□ -0.48
PTCD1-201ENST00000292478 CACNA1SQ13698 1873 aa12.04□□□□□ -0.48
PTCD1-201ENST00000292478 NOTOA8MTQ0 251 aa12.04□□□□□ -0.48
PTCD1-201ENST00000292478 PRAF2O60831 178 aa12.04□□□□□ -0.48
PTCD1-201ENST00000292478 F11P03951 625 aa12.04□□□□□ -0.48
PTCD1-201ENST00000292478 GRPRP30550 384 aa12.04□□□□□ -0.48
PTCD1-201ENST00000292478 OR7D2Q96RA2 312 aa12.04□□□□□ -0.48
PTCD1-201ENST00000292478 NELFAQ9H3P2 528 aa12.04□□□□□ -0.48
PTCD1-201ENST00000292478 ZNF443Q9Y2A4 671 aaPredicted RBP12.04□□□□□ -0.48
PTCD1-201ENST00000292478 CEPT1Q9Y6K0 416 aa12.04□□□□□ -0.48
PTCD1-201ENST00000292478 A0A0U1RQS6 177 aa12.04□□□□□ -0.48
PTCD1-201ENST00000292478 LYRM1O43325 122 aa12.04□□□□□ -0.48
PTCD1-201ENST00000292478 KIAA0895LQ68EN5 471 aa12.04□□□□□ -0.48
PTCD1-201ENST00000292478 FRMPD2BQ6IN97 320 aa12.04□□□□□ -0.48
PTCD1-201ENST00000292478 LAS2Q8IYD9 372 aa12.04□□□□□ -0.48
PTCD1-201ENST00000292478 RNF113BQ8IZP6 322 aaKnown RBP12.04□□□□□ -0.48
PTCD1-201ENST00000292478 OR2A12Q8NGT7 310 aa12.04□□□□□ -0.48
PTCD1-201ENST00000292478 NANOS1Q8WY41 292 aaKnown RBP12.04□□□□□ -0.48
PTCD1-201ENST00000292478 TCEAL4Q96EI5 215 aa12.04□□□□□ -0.48
PTCD1-201ENST00000292478 LRRC46Q96FV0 321 aa12.04□□□□□ -0.48
PTCD1-201ENST00000292478 FAM86C1Q9NVL1 165 aa12.04□□□□□ -0.48
PTCD1-201ENST00000292478 TESQ9UGI8 421 aaKnown RBP12.04□□□□□ -0.48
PTCD1-201ENST00000292478 M0R036 132 aa12.04□□□□□ -0.48
PTCD1-201ENST00000292478 OR7A17O14581 309 aa12.04□□□□□ -0.48
PTCD1-201ENST00000292478 RDH16O75452 317 aa12.04□□□□□ -0.48
PTCD1-201ENST00000292478 ATE1O95260 518 aa12.04□□□□□ -0.48
PTCD1-201ENST00000292478 CRHBPP24387 322 aa12.04□□□□□ -0.48
PTCD1-201ENST00000292478 TLE3Q04726 772 aa12.04□□□□□ -0.48
PTCD1-201ENST00000292478 MGAT3Q09327 533 aa12.04□□□□□ -0.48
PTCD1-201ENST00000292478 NCCRP1Q6ZVX7 275 aaPredicted RBP12.04□□□□□ -0.48
PTCD1-201ENST00000292478 MFSD6LQ8IWD5 586 aa12.04□□□□□ -0.48
PTCD1-201ENST00000292478 BEST3Q8N1M1 668 aa12.04□□□□□ -0.48
PTCD1-201ENST00000292478 SCGB1C1Q8TD33 95 aa12.04□□□□□ -0.48
PTCD1-201ENST00000292478 CDS1Q92903 461 aa12.04□□□□□ -0.48
PTCD1-201ENST00000292478 SPTSSAQ969W0 71 aa12.04□□□□□ -0.48
PTCD1-201ENST00000292478 MED17Q9NVC6 651 aa12.04□□□□□ -0.48
PTCD1-201ENST00000292478 B3GNT3Q9Y2A9 372 aa12.04□□□□□ -0.48
PTCD1-201ENST00000292478 PCDHGA8Q9Y5G5 932 aa12.04□□□□□ -0.48
PTCD1-201ENST00000292478 CLDN24A6NM45 220 aa12.03□□□□□ -0.48
PTCD1-201ENST00000292478 ACOT7O00154 380 aa12.03□□□□□ -0.48
PTCD1-201ENST00000292478 GFRA2O00451 464 aa12.03□□□□□ -0.48
PTCD1-201ENST00000292478 ADAM12O43184 909 aa12.03□□□□□ -0.48
PTCD1-201ENST00000292478 GPR75O95800 540 aa12.03□□□□□ -0.48
PTCD1-201ENST00000292478 CPMP14384 443 aa12.03□□□□□ -0.48
PTCD1-201ENST00000292478 NR0B1P51843 470 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms