RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 FBXL20Q96IG2 436 aa7.83□□□□□ -1.16
PTPDC1-201ENST00000288976 SLITRK2Q9H156 845 aa7.83□□□□□ -1.16
PTPDC1-201ENST00000288976 OR51V1Q9H2C8 321 aa7.83□□□□□ -1.16
PTPDC1-201ENST00000288976 EVA1AQ9H8M9 152 aa7.83□□□□□ -1.16
PTPDC1-201ENST00000288976 SAMHD1Q9Y3Z3 626 aaKnown RBP7.83□□□□□ -1.16
PTPDC1-201ENST00000288976 OTOGLQ3ZCN5 2332 aa7.83□□□□□ -1.16
PTPDC1-201ENST00000288976 IDSB3KWA1 339 aa7.83□□□□□ -1.16
PTPDC1-201ENST00000288976 SCO2O43819 266 aa7.83□□□□□ -1.16
PTPDC1-201ENST00000288976 ALPPP05187 535 aa7.83□□□□□ -1.16
PTPDC1-201ENST00000288976 PCGF2P35227 344 aa7.83□□□□□ -1.16
PTPDC1-201ENST00000288976 SELENOVP59797 346 aa7.83□□□□□ -1.16
PTPDC1-201ENST00000288976 BTG2P78543 158 aa7.83□□□□□ -1.16
PTPDC1-201ENST00000288976 MRPS22P82650 360 aaKnown RBP7.83□□□□□ -1.16
PTPDC1-201ENST00000288976 SSPNQ14714 243 aa7.83□□□□□ -1.16
PTPDC1-201ENST00000288976 ZNF630Q2M218 657 aaPredicted RBP7.83□□□□□ -1.16
PTPDC1-201ENST00000288976 RFX4Q33E94 735 aa7.83□□□□□ -1.16
PTPDC1-201ENST00000288976 GCNT6Q5T4J0 391 aa7.83□□□□□ -1.16
PTPDC1-201ENST00000288976 LCN10Q6JVE6 187 aa7.83□□□□□ -1.16
PTPDC1-201ENST00000288976 SLC30A6Q6NXT4 461 aa7.83□□□□□ -1.16
PTPDC1-201ENST00000288976 ZNF551Q7Z340 670 aaPredicted RBP7.83□□□□□ -1.16
PTPDC1-201ENST00000288976 FAM220AQ7Z4H9 259 aa7.83□□□□□ -1.16
PTPDC1-201ENST00000288976 ZBTB46Q86UZ6 589 aa7.83□□□□□ -1.16
PTPDC1-201ENST00000288976 NUP43Q8NFH3 380 aa7.83□□□□□ -1.16
PTPDC1-201ENST00000288976 OR7G2Q8NG99 324 aa7.83□□□□□ -1.16
PTPDC1-201ENST00000288976 OR6K6Q8NGW6 343 aa7.83□□□□□ -1.16
PTPDC1-201ENST00000288976 MAGEE2Q8TD90 523 aaPredicted RBP7.83□□□□□ -1.16
PTPDC1-201ENST00000288976 LRRC46Q96FV0 321 aa7.83□□□□□ -1.16
PTPDC1-201ENST00000288976 THSD1Q9NS62 852 aa7.83□□□□□ -1.16
PTPDC1-201ENST00000288976 KCND3Q9UK17 655 aa7.83□□□□□ -1.16
PTPDC1-201ENST00000288976 UPK1AO00322 258 aa7.83□□□□□ -1.16
PTPDC1-201ENST00000288976 KLF7O75840 302 aaPredicted RBP7.83□□□□□ -1.16
PTPDC1-201ENST00000288976 IGKV3-11P04433 115 aa7.83□□□□□ -1.16
PTPDC1-201ENST00000288976 HNRNPCP07910 306 aaKnown RBP eCLIP7.83□□□□□ -1.16
PTPDC1-201ENST00000288976 LIPCP11150 499 aa7.83□□□□□ -1.16
PTPDC1-201ENST00000288976 POU2F1P14859 743 aa7.83□□□□□ -1.16
PTPDC1-201ENST00000288976 MSX1P28360 303 aa7.83□□□□□ -1.16
PTPDC1-201ENST00000288976 SOX18P35713 384 aa7.83□□□□□ -1.16
PTPDC1-201ENST00000288976 MC3RP41968 323 aa7.83□□□□□ -1.16
PTPDC1-201ENST00000288976 EMP2P54851 167 aa7.83□□□□□ -1.16
PTPDC1-201ENST00000288976 PSMD4P55036 377 aaKnown RBP7.83□□□□□ -1.16
PTPDC1-201ENST00000288976 LIPEQ05469 1076 aa7.83□□□□□ -1.16
PTPDC1-201ENST00000288976 EXT1Q16394 746 aa7.83□□□□□ -1.16
PTPDC1-201ENST00000288976 HEPHL1Q6MZM0 1159 aa7.83□□□□□ -1.16
PTPDC1-201ENST00000288976 MFSD12Q6NUT3 480 aa7.83□□□□□ -1.16
PTPDC1-201ENST00000288976 C6orf120Q7Z4R8 191 aa7.83□□□□□ -1.16
PTPDC1-201ENST00000288976 IQCF2Q8IXL9 164 aa7.83□□□□□ -1.16
PTPDC1-201ENST00000288976 KBTBD2Q8IY47 623 aa7.83□□□□□ -1.16
PTPDC1-201ENST00000288976 CDRT4Q8N9R6 151 aa7.83□□□□□ -1.16
PTPDC1-201ENST00000288976 BTBD2Q9BX70 525 aa7.83□□□□□ -1.16
PTPDC1-201ENST00000288976 OLAHQ9NV23 265 aa7.83□□□□□ -1.16
PTPDC1-201ENST00000288976 C3orf18Q9UK00 162 aa7.83□□□□□ -1.16
PTPDC1-201ENST00000288976 FAM20BO75063 409 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 CBX7O95931 251 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 LYNP07948 512 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 GGT1P19440 569 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 CTBP2P56545 445 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 SNTA1Q13424 505 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 CRTC2Q53ET0 693 aaPredicted RBP7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 VWA2Q5GFL6 755 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 LCN8Q6JVE9 175 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 GALNTL5Q7Z4T8 443 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 CPEB2Q7Z5Q1 589 aaKnown RBP7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 ZZZ3Q8IYH5 903 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 ZNF615Q8N8J6 731 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 ENDOVQ8N8Q3 282 aaKnown RBP7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 OR5AK3PQ8NH89 298 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 M1APQ8TC57 530 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 ZNF721Q8TF20 911 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 DTNBP1Q96EV8 351 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 GORASP2Q9H8Y8 452 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 FANCFQ9NPI8 374 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 DUSP22Q9NRW4 184 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 CALML5Q9NZT1 146 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 DKK4Q9UBT3 224 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 LIPT1Q9Y234 373 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 IGHV1-45A0A0A0MS14 117 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 C17orf105B2RV13 164 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 WBP4O75554 376 aaKnown RBP7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 UMODP07911 640 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 TSPAN19P0C672 248 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 CYP4B1P13584 511 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 SERPINB10P48595 397 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 OR4D2P58180 307 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 DSTNP60981 165 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 SELPLGQ14242 412 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 TRIM25Q14258 630 aaKnown RBP7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 NSDHLQ15738 373 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 ZNF750Q32MQ0 723 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 HDDC2Q7Z4H3 204 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 RAB43Q86YS6 212 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 CHDHQ8NE62 594 aaPredicted RBP7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 OR1N1Q8NGS0 311 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 SLC22A8Q8TCC7 542 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 UTP4Q969X6 686 aaKnown RBP7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 EFHD2Q96C19 240 aaPredicted RBP7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 ZNF583Q96ND8 569 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 CRB3Q9BUF7 120 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 HDHD2Q9H0R4 259 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 SERHL2Q9H4I8 314 aa7.82□□□□□ -1.16
PTPDC1-201ENST00000288976 CXorf56Q9H5V9 222 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms