RNA–Protein interactions for RNA: ENST00000287543.4

MALSU1-201, Transcript of mitochondrial assembly of ribosomal large subunit 1, humanhuman

TSL 2

Gene MALSU1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALSU1-201ENST00000287543 DCST1Q5T197 706 aa17.17■□□□□ 0.34
MALSU1-201ENST00000287543 ATG16L1Q676U5 607 aa17.17■□□□□ 0.34
MALSU1-201ENST00000287543 CDC73Q6P1J9 531 aa17.17■□□□□ 0.34
MALSU1-201ENST00000287543 CHMP1BQ7LBR1 199 aa17.17■□□□□ 0.34
MALSU1-201ENST00000287543 MARCH3Q86UD3 253 aa17.17■□□□□ 0.34
MALSU1-201ENST00000287543 LIX1LQ8IVB5 337 aa17.17■□□□□ 0.34
MALSU1-201ENST00000287543 DMRTC2Q8IXT2 367 aaPredicted RBP17.17■□□□□ 0.34
MALSU1-201ENST00000287543 KRTCAP2Q8N6L1 136 aa17.17■□□□□ 0.34
MALSU1-201ENST00000287543 TNIP2Q8NFZ5 429 aa17.17■□□□□ 0.34
MALSU1-201ENST00000287543 ADAMTS15Q8TE58 950 aa17.17■□□□□ 0.34
MALSU1-201ENST00000287543 JADE3Q92613 823 aa17.17■□□□□ 0.34
MALSU1-201ENST00000287543 CHMP6Q96FZ7 201 aa17.17■□□□□ 0.34
MALSU1-201ENST00000287543 DPY30Q9C005 99 aa17.17■□□□□ 0.34
MALSU1-201ENST00000287543 C20orf27Q9GZN8 174 aa17.17■□□□□ 0.34
MALSU1-201ENST00000287543 HOXD1Q9GZZ0 328 aa17.17■□□□□ 0.34
MALSU1-201ENST00000287543 ACBD3Q9H3P7 528 aa17.17■□□□□ 0.34
MALSU1-201ENST00000287543 NPDC1Q9NQX5 325 aaPredicted RBP17.17■□□□□ 0.34
MALSU1-201ENST00000287543 KCNN3Q9UGI6 736 aa17.17■□□□□ 0.34
MALSU1-201ENST00000287543 FOXD3Q9UJU5 478 aaPredicted RBP17.17■□□□□ 0.34
MALSU1-201ENST00000287543 PCDHGB4Q9UN71 923 aa17.17■□□□□ 0.34
MALSU1-201ENST00000287543 MAST4O15021 2626 aa17.17■□□□□ 0.34
MALSU1-201ENST00000287543 NCOA6Q14686 2063 aaPredicted RBP17.16■□□□□ 0.34
MALSU1-201ENST00000287543 SYT5O00445 386 aa17.16■□□□□ 0.34
MALSU1-201ENST00000287543 NDUFB5O43674 189 aa17.16■□□□□ 0.34
MALSU1-201ENST00000287543 C6orf47O95873 294 aa17.16■□□□□ 0.34
MALSU1-201ENST00000287543 IGKV1D-16P01601 117 aa17.16■□□□□ 0.34
MALSU1-201ENST00000287543 CAPN3P20807 821 aa17.16■□□□□ 0.34
MALSU1-201ENST00000287543 EFNA1P20827 205 aaPredicted RBP17.16■□□□□ 0.34
MALSU1-201ENST00000287543 ATP6V1C1P21283 382 aa17.16■□□□□ 0.34
MALSU1-201ENST00000287543 CTSSP25774 331 aa17.16■□□□□ 0.34
MALSU1-201ENST00000287543 LHX2P50458 406 aa17.16■□□□□ 0.34
MALSU1-201ENST00000287543 STX5Q13190 355 aa17.16■□□□□ 0.34
MALSU1-201ENST00000287543 LASP1Q14847 261 aaKnown RBP17.16■□□□□ 0.34
MALSU1-201ENST00000287543 PGS1Q32NB8 556 aa17.16■□□□□ 0.34
MALSU1-201ENST00000287543 GRAMD1BQ3KR37 738 aa17.16■□□□□ 0.34
MALSU1-201ENST00000287543 ANXA8L1Q5VT79 327 aa17.16■□□□□ 0.34
MALSU1-201ENST00000287543 ZNF295-AS1Q8N0V1 137 aa17.16■□□□□ 0.34
MALSU1-201ENST00000287543 OR8J2Q8NGG1 315 aa17.16■□□□□ 0.34
MALSU1-201ENST00000287543 WNT2BQ93097 391 aa17.16■□□□□ 0.34
MALSU1-201ENST00000287543 C1GALT1C1Q96EU7 318 aa17.16■□□□□ 0.34
MALSU1-201ENST00000287543 C16orf58Q96GQ5 468 aa17.16■□□□□ 0.34
MALSU1-201ENST00000287543 PIGQQ9BRB3 760 aa17.16■□□□□ 0.34
MALSU1-201ENST00000287543 MEAF6Q9HAF1 191 aa17.16■□□□□ 0.34
MALSU1-201ENST00000287543 TMBIM4Q9HC24 238 aa17.16■□□□□ 0.34
MALSU1-201ENST00000287543 FLRT3Q9NZU0 649 aa17.16■□□□□ 0.34
MALSU1-201ENST00000287543 MED11Q9P086 117 aa17.16■□□□□ 0.34
MALSU1-201ENST00000287543 RPH3AQ9Y2J0 694 aaPredicted RBP17.16■□□□□ 0.34
MALSU1-201ENST00000287543 A0A087WZY1 265 aa17.15■□□□□ 0.34
MALSU1-201ENST00000287543 DUXAA6NLW8 204 aa17.15■□□□□ 0.34
MALSU1-201ENST00000287543 RNASET2O00584 256 aaKnown RBP17.15■□□□□ 0.34
MALSU1-201ENST00000287543 SCDO00767 359 aa17.15■□□□□ 0.34
MALSU1-201ENST00000287543 ZNF708P17019 499 aa17.15■□□□□ 0.34
MALSU1-201ENST00000287543 BMP5P22003 454 aa17.15■□□□□ 0.34
MALSU1-201ENST00000287543 ASCL1P50553 236 aa17.15■□□□□ 0.34
MALSU1-201ENST00000287543 DGKQP52824 942 aa17.15■□□□□ 0.34
MALSU1-201ENST00000287543 CLNS1AP54105 237 aaKnown RBP17.15■□□□□ 0.34
MALSU1-201ENST00000287543 MAGOHP61326 146 aaKnown RBP17.15■□□□□ 0.34
MALSU1-201ENST00000287543 SRYQ05066 204 aa17.15■□□□□ 0.34
MALSU1-201ENST00000287543 DPY19L1Q2PZI1 675 aa17.15■□□□□ 0.34
MALSU1-201ENST00000287543 RAET1LQ5VY80 246 aa17.15■□□□□ 0.34
MALSU1-201ENST00000287543 FIGNL1Q6PIW4 674 aa17.15■□□□□ 0.34
MALSU1-201ENST00000287543 MEIOBQ8N635 442 aa17.15■□□□□ 0.34
MALSU1-201ENST00000287543 OR4C3Q8NH37 302 aa17.15■□□□□ 0.34
MALSU1-201ENST00000287543 PPP1R36Q96LQ0 422 aa17.15■□□□□ 0.34
MALSU1-201ENST00000287543 TUBA1CQ9BQE3 449 aa17.15■□□□□ 0.34
MALSU1-201ENST00000287543 NUF2Q9BZD4 464 aa17.15■□□□□ 0.34
MALSU1-201ENST00000287543 CXorf36Q9H7Y0 433 aa17.15■□□□□ 0.34
MALSU1-201ENST00000287543 GTF3C1Q12789 2109 aa17.14■□□□□ 0.33
MALSU1-201ENST00000287543 A0A1W2PQD3 144 aa17.14■□□□□ 0.33
MALSU1-201ENST00000287543 TRPC5OSA6NMA1 111 aa17.14■□□□□ 0.33
MALSU1-201ENST00000287543 ENO4A6NNW6 628 aa17.14■□□□□ 0.33
MALSU1-201ENST00000287543 HDAC3O15379 428 aa17.14■□□□□ 0.33
MALSU1-201ENST00000287543 RCBTB2O95199 551 aa17.14■□□□□ 0.33
MALSU1-201ENST00000287543 OXSR1O95747 527 aaPredicted RBP17.14■□□□□ 0.33
MALSU1-201ENST00000287543 POU3F2P20265 443 aaPredicted RBP17.14■□□□□ 0.33
MALSU1-201ENST00000287543 STARP49675 285 aa17.14■□□□□ 0.33
MALSU1-201ENST00000287543 WDR4P57081 412 aaKnown RBP17.14■□□□□ 0.33
MALSU1-201ENST00000287543 B3GALT5-AS1P59052 145 aa17.14■□□□□ 0.33
MALSU1-201ENST00000287543 FBXL19-AS1Q494R0 122 aa17.14■□□□□ 0.33
MALSU1-201ENST00000287543 OGFOD2Q6N063 350 aa17.14■□□□□ 0.33
MALSU1-201ENST00000287543 SPATA19Q7Z5L4 167 aa17.14■□□□□ 0.33
MALSU1-201ENST00000287543 ADGRE4PQ86SQ3 457 aa17.14■□□□□ 0.33
MALSU1-201ENST00000287543 ZNF527Q8NB42 609 aa17.14■□□□□ 0.33
MALSU1-201ENST00000287543 ACTRT2Q8TDY3 377 aa17.14■□□□□ 0.33
MALSU1-201ENST00000287543 TESCQ96BS2 214 aa17.14■□□□□ 0.33
MALSU1-201ENST00000287543 TLCD1Q96CP7 247 aa17.14■□□□□ 0.33
MALSU1-201ENST00000287543 YIPF4Q9BSR8 244 aa17.14■□□□□ 0.33
MALSU1-201ENST00000287543 MCCC2Q9HCC0 563 aa17.14■□□□□ 0.33
MALSU1-201ENST00000287543 PNPOQ9NVS9 261 aa17.14■□□□□ 0.33
MALSU1-201ENST00000287543 AP4B1Q9Y6B7 739 aa17.14■□□□□ 0.33
MALSU1-201ENST00000287543 PRSS51A0A1B0GVH4 220 aa17.13■□□□□ 0.33
MALSU1-201ENST00000287543 CLCA1A8K7I4 914 aa17.13■□□□□ 0.33
MALSU1-201ENST00000287543 H3BNH8 94 aa17.13■□□□□ 0.33
MALSU1-201ENST00000287543 AK1P00568 194 aa17.13■□□□□ 0.33
MALSU1-201ENST00000287543 TMIGD3P0DMS9 266 aaPredicted RBP17.13■□□□□ 0.33
MALSU1-201ENST00000287543 CLDN18P56856 261 aa17.13■□□□□ 0.33
MALSU1-201ENST00000287543 HBA1P69905 142 aa17.13■□□□□ 0.33
MALSU1-201ENST00000287543 OCRLQ01968 901 aa17.13■□□□□ 0.33
MALSU1-201ENST00000287543 TLE4Q04727 773 aa17.13■□□□□ 0.33
MALSU1-201ENST00000287543 ARSKQ6UWY0 536 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms