RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 FNDC5Q8NAU1 212 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 CSF3RQ99062 836 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 NHEJ1Q9H9Q4 299 aaPredicted RBP2.51□□□□□ -2.01
CHD1-201ENST00000284049 SPAG4Q9NPE6 437 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 KLRF1Q9NZS2 232 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 ATPIF1Q9UII2 106 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 PILRAQ9UKJ1 303 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 PTPRCP08575 1304 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 PPIAL4EA0A075B759 164 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 DNALI1O14645 258 aaPredicted RBP2.51□□□□□ -2.01
CHD1-201ENST00000284049 TIMM23O14925 209 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 MT-ND2P03891 347 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 RPLP0P05388 317 aaKnown RBP2.51□□□□□ -2.01
CHD1-201ENST00000284049 UBTFL1P0CB47 393 aaPredicted RBP2.51□□□□□ -2.01
CHD1-201ENST00000284049 PPIAL4FP0DN26 164 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 EPHX2P34913 555 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 RAD51Q06609 339 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 RBBP4Q09028 425 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 SLAQ13239 276 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 MTHFSDQ2M296 383 aaKnown RBP2.51□□□□□ -2.01
CHD1-201ENST00000284049 NHLRC1Q6VVB1 395 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 CDR2LQ86X02 465 aaPredicted RBP2.51□□□□□ -2.01
CHD1-201ENST00000284049 SFR1Q86XK3 245 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 RBM45Q8IUH3 476 aaKnown RBP2.51□□□□□ -2.01
CHD1-201ENST00000284049 SPAG16Q8N0X2 631 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 DHRSXQ8N5I4 330 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 DCUN1D5Q9BTE7 237 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 PARD6BQ9BYG5 372 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 ESRP2Q9H6T0 727 aaKnown RBP2.51□□□□□ -2.01
CHD1-201ENST00000284049 BEX1Q9HBH7 125 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 TECRQ9NZ01 308 aaKnown RBP2.51□□□□□ -2.01
CHD1-201ENST00000284049 PIPOXQ9P0Z9 390 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 MYEF2Q9P2K5 600 aaKnown RBP2.51□□□□□ -2.01
CHD1-201ENST00000284049 PSMD13Q9UNM6 376 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 PRG3Q9Y2Y8 225 aaPredicted RBP2.51□□□□□ -2.01
CHD1-201ENST00000284049 PPIAL4AQ9Y536 164 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 FER1L6Q2WGJ9 1857 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 IQCMA0A1B0GVH7 501 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 LINC01553A4QN01 128 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 ETV2O00321 342 aaPredicted RBP2.51□□□□□ -2.01
CHD1-201ENST00000284049 SYT7O43581 403 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 KCNJ13O60928 360 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 ATP5LO75964 103 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 ARSBP15848 533 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 H2AFXP16104 143 aaPredicted RBP2.51□□□□□ -2.01
CHD1-201ENST00000284049 CHRNB2P17787 502 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 RPL4P36578 427 aaKnown RBP2.51□□□□□ -2.01
CHD1-201ENST00000284049 CSNK1EP49674 416 aaKnown RBP2.51□□□□□ -2.01
CHD1-201ENST00000284049 RAB11AP62491 216 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 RAB11BQ15907 218 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 PRTGQ2VWP7 1150 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 CELF3Q5SZQ8 465 aaKnown RBP2.51□□□□□ -2.01
CHD1-201ENST00000284049 GPR157Q5UAW9 335 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 DMKNQ6E0U4 476 aaPredicted RBP2.51□□□□□ -2.01
CHD1-201ENST00000284049 TTC23LQ6PF05 361 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 LRRC55Q6ZSA7 311 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 SETD3Q86TU7 594 aaPredicted RBP2.51□□□□□ -2.01
CHD1-201ENST00000284049 TRIM69Q86WT6 500 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 SCFD1Q8WVM8 642 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 SMPDL3AQ92484 453 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 ART4Q93070 314 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 NEDD4LQ96PU5 975 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 LRRN3Q9H3W5 708 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 MCCC2Q9HCC0 563 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 THSD1Q9NS62 852 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 TMEM74BQ9NUR3 256 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 FKBP14Q9NWM8 211 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 PRDM4Q9UKN5 801 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 SLC6A5Q9Y345 797 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 PCDH11XQ9BZA7 1347 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 PCDH11YQ9BZA8 1340 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 ANTXRLA6NF34 631 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 DUX1O43812 170 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 OR10H3O60404 316 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 CDC40O60508 579 aaKnown RBP eCLIP2.51□□□□□ -2.01
CHD1-201ENST00000284049 FCER2P06734 321 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 PRSS2P07478 247 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 HNRNPH3P31942 346 aaKnown RBP2.51□□□□□ -2.01
CHD1-201ENST00000284049 TRIM23P36406 574 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 RBM34P42696 430 aaKnown RBP2.51□□□□□ -2.01
CHD1-201ENST00000284049 HSPA2P54652 639 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 PKNOX1P55347 436 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 CTSWP56202 376 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 RWDD2BP57060 319 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 RPS13P62277 151 aaKnown RBP2.51□□□□□ -2.01
CHD1-201ENST00000284049 LRRC63Q05C16 580 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 RGS1Q08116 209 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 SNTA1Q13424 505 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 PTGR1Q14914 329 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 KLHL40Q2TBA0 621 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 GTDC1Q4AE62 458 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 ZNF772Q68DY9 489 aaPredicted RBP2.51□□□□□ -2.01
CHD1-201ENST00000284049 KIAA0895LQ68EN5 471 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 PLXDC2Q6UX71 529 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 H2BFWTQ7Z2G1 175 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 LRRC6Q86X45 466 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 MARCH9Q86YJ5 346 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 NKAIN4Q8IVV8 208 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 RCOR2Q8IZ40 523 aa2.51□□□□□ -2.01
CHD1-201ENST00000284049 GPR148Q8TDV2 347 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms