RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 CPLX4Q7Z7G2 160 aa5.96□□□□□ -1.46
CD44-204ENST00000279452 HMGN2P46Q86SG4 172 aa5.96□□□□□ -1.46
CD44-204ENST00000279452 ZAR1Q86SH2 424 aa5.96□□□□□ -1.46
CD44-204ENST00000279452 IFNEQ86WN2 208 aa5.96□□□□□ -1.46
CD44-204ENST00000279452 EID3Q8N140 333 aa5.96□□□□□ -1.46
CD44-204ENST00000279452 FAM83FQ8NEG4 500 aaPredicted RBP5.96□□□□□ -1.46
CD44-204ENST00000279452 OR4C3Q8NH37 302 aa5.96□□□□□ -1.46
CD44-204ENST00000279452 GOT1L1Q8NHS2 421 aaPredicted RBP5.96□□□□□ -1.46
CD44-204ENST00000279452 NEIL3Q8TAT5 605 aa5.96□□□□□ -1.46
CD44-204ENST00000279452 DUSP19Q8WTR2 217 aa5.96□□□□□ -1.46
CD44-204ENST00000279452 SMPDL3BQ92485 455 aa5.96□□□□□ -1.46
CD44-204ENST00000279452 SARAFQ96BY9 339 aa5.96□□□□□ -1.46
CD44-204ENST00000279452 NEURL3Q96EH8 262 aa5.96□□□□□ -1.46
CD44-204ENST00000279452 AURKBQ96GD4 344 aaPredicted RBP5.96□□□□□ -1.46
CD44-204ENST00000279452 SFXN2Q96NB2 322 aa5.96□□□□□ -1.46
CD44-204ENST00000279452 HOXD1Q9GZZ0 328 aa5.96□□□□□ -1.46
CD44-204ENST00000279452 DSN1Q9H410 356 aa5.96□□□□□ -1.46
CD44-204ENST00000279452 SERHL2Q9H4I8 314 aa5.96□□□□□ -1.46
CD44-204ENST00000279452 CCDC134Q9H6E4 229 aa5.96□□□□□ -1.46
CD44-204ENST00000279452 ZDHHC11Q9H8X9 412 aa5.96□□□□□ -1.46
CD44-204ENST00000279452 TPT1P8Q9HAU6 139 aa5.96□□□□□ -1.46
CD44-204ENST00000279452 UBQLN4Q9NRR5 601 aa5.96□□□□□ -1.46
CD44-204ENST00000279452 TAS2R10Q9NYW0 307 aa5.96□□□□□ -1.46
CD44-204ENST00000279452 MED11Q9P086 117 aa5.96□□□□□ -1.46
CD44-204ENST00000279452 KLHL14Q9P2G3 628 aa5.96□□□□□ -1.46
CD44-204ENST00000279452 FBXL2Q9UKC9 423 aa5.96□□□□□ -1.46
CD44-204ENST00000279452 MKLN1Q9UL63 735 aa5.96□□□□□ -1.46
CD44-204ENST00000279452 CAMK2AQ9UQM7 478 aa5.96□□□□□ -1.46
CD44-204ENST00000279452 VDAC3Q9Y277 283 aa5.96□□□□□ -1.46
CD44-204ENST00000279452 NDUFAF1Q9Y375 327 aa5.96□□□□□ -1.46
CD44-204ENST00000279452 HRH3Q9Y5N1 445 aa5.96□□□□□ -1.46
CD44-204ENST00000279452 KCNE3Q9Y6H6 103 aa5.96□□□□□ -1.46
CD44-204ENST00000279452 A0A096LPI6 279 aa5.95□□□□□ -1.46
CD44-204ENST00000279452 A1L4Q6 167 aa5.95□□□□□ -1.46
CD44-204ENST00000279452 FIGNL2A6NMB9 653 aa5.95□□□□□ -1.46
CD44-204ENST00000279452 C5orf58C9J3I9 102 aa5.95□□□□□ -1.46
CD44-204ENST00000279452 H0Y3Z8 333 aa5.95□□□□□ -1.46
CD44-204ENST00000279452 H3BML4 177 aa5.95□□□□□ -1.46
CD44-204ENST00000279452 HMGN4O00479 90 aa5.95□□□□□ -1.46
CD44-204ENST00000279452 AQP7O14520 342 aa5.95□□□□□ -1.46
CD44-204ENST00000279452 BCKDKO14874 412 aa5.95□□□□□ -1.46
CD44-204ENST00000279452 FADS1O60427 444 aa5.95□□□□□ -1.46
CD44-204ENST00000279452 HCN1O60741 890 aa5.95□□□□□ -1.46
CD44-204ENST00000279452 TNFRSF21O75509 655 aa5.95□□□□□ -1.46
CD44-204ENST00000279452 STX11O75558 287 aa5.95□□□□□ -1.46
CD44-204ENST00000279452 SOX30O94993 753 aa5.95□□□□□ -1.46
CD44-204ENST00000279452 H6PDO95479 791 aa5.95□□□□□ -1.46
CD44-204ENST00000279452 C1QCP02747 245 aa5.95□□□□□ -1.46
CD44-204ENST00000279452 HPNP05981 417 aa5.95□□□□□ -1.46
CD44-204ENST00000279452 BCHEP06276 602 aa5.95□□□□□ -1.46
CD44-204ENST00000279452 STSP08842 583 aa5.95□□□□□ -1.46
CD44-204ENST00000279452 ETFAP13804 333 aa5.95□□□□□ -1.46
CD44-204ENST00000279452 TBXA2RP21731 343 aa5.95□□□□□ -1.46
CD44-204ENST00000279452 SRD5A2P31213 254 aa5.95□□□□□ -1.46
CD44-204ENST00000279452 MAP3K8P41279 467 aa5.95□□□□□ -1.46
CD44-204ENST00000279452 CA7P43166 264 aa5.95□□□□□ -1.46
CD44-204ENST00000279452 ATRXP46100 2492 aa5.95□□□□□ -1.46
CD44-204ENST00000279452 ZFP36L2P47974 494 aaKnown RBP5.95□□□□□ -1.46
CD44-204ENST00000279452 SEC24CP53992 1094 aa5.95□□□□□ -1.46
CD44-204ENST00000279452 DSTNP60981 165 aa5.95□□□□□ -1.46
CD44-204ENST00000279452 SRYQ05066 204 aa5.95□□□□□ -1.46
CD44-204ENST00000279452 C17orf67Q0P5P2 114 aa5.95□□□□□ -1.46
CD44-204ENST00000279452 NFYCQ13952 458 aa5.95□□□□□ -1.46
CD44-204ENST00000279452 MAPRE2Q15555 327 aa5.95□□□□□ -1.46
CD44-204ENST00000279452 ZNF630Q2M218 657 aaPredicted RBP5.95□□□□□ -1.46
CD44-204ENST00000279452 HYAL4Q2M3T9 481 aa5.95□□□□□ -1.46
CD44-204ENST00000279452 NDUFAF6Q330K2 333 aa5.95□□□□□ -1.46
CD44-204ENST00000279452 ARHGAP11BQ3KRB8 267 aa5.95□□□□□ -1.46
CD44-204ENST00000279452 COX20Q5RI15 118 aa5.95□□□□□ -1.46
CD44-204ENST00000279452 PDZK1Q5T2W1 519 aa5.95□□□□□ -1.46
CD44-204ENST00000279452 FNDC7Q5VTL7 733 aa5.95□□□□□ -1.46
CD44-204ENST00000279452 METTL21CQ5VZV1 264 aa5.95□□□□□ -1.46
CD44-204ENST00000279452 TMEM81Q6P7N7 255 aa5.95□□□□□ -1.46
CD44-204ENST00000279452 AAGABQ6PD74 315 aa5.95□□□□□ -1.46
CD44-204ENST00000279452 NCCRP1Q6ZVX7 275 aaPredicted RBP5.95□□□□□ -1.46
CD44-204ENST00000279452 SPATA21Q7Z572 469 aa5.95□□□□□ -1.46
CD44-204ENST00000279452 DHDDSQ86SQ9 333 aa5.95□□□□□ -1.46
CD44-204ENST00000279452 MISPQ8IVT2 679 aa5.95□□□□□ -1.46
CD44-204ENST00000279452 UBQLNLQ8IYU4 475 aa5.95□□□□□ -1.46
CD44-204ENST00000279452 ZNF619Q8N2I2 560 aa5.95□□□□□ -1.46
CD44-204ENST00000279452 ANKFN1Q8N957 763 aa5.95□□□□□ -1.46
CD44-204ENST00000279452 WDSUB1Q8N9V3 476 aa5.95□□□□□ -1.46
CD44-204ENST00000279452 OR2M3Q8NG83 312 aa5.95□□□□□ -1.46
CD44-204ENST00000279452 OR5M1Q8NGP8 315 aa5.95□□□□□ -1.46
CD44-204ENST00000279452 FAM57AQ8TBR7 257 aa5.95□□□□□ -1.46
CD44-204ENST00000279452 SSC4DQ8WTU2 575 aa5.95□□□□□ -1.46
CD44-204ENST00000279452 HOXB13Q92826 284 aaPredicted RBP5.95□□□□□ -1.46
CD44-204ENST00000279452 RELTQ969Z4 430 aa5.95□□□□□ -1.46
CD44-204ENST00000279452 ROPN1LQ96C74 230 aa5.95□□□□□ -1.46
CD44-204ENST00000279452 ELAC2Q9BQ52 826 aaKnown RBP5.95□□□□□ -1.46
CD44-204ENST00000279452 TP63Q9H3D4 680 aaPredicted RBP5.95□□□□□ -1.46
CD44-204ENST00000279452 RAD21L1Q9H4I0 556 aa5.95□□□□□ -1.46
CD44-204ENST00000279452 SLC6A13Q9NSD5 602 aa5.95□□□□□ -1.46
CD44-204ENST00000279452 PNPLA3Q9NST1 481 aa5.95□□□□□ -1.46
CD44-204ENST00000279452 QPCTLQ9NXS2 382 aa5.95□□□□□ -1.46
CD44-204ENST00000279452 ARMCX1Q9P291 453 aa5.95□□□□□ -1.46
CD44-204ENST00000279452 SPRR3Q9UBC9 169 aa5.95□□□□□ -1.46
CD44-204ENST00000279452 P2RX2Q9UBL9 471 aa5.95□□□□□ -1.46
CD44-204ENST00000279452 ERRFI1Q9UJM3 462 aaPredicted RBP5.95□□□□□ -1.46
CD44-204ENST00000279452 LEF1Q9UJU2 399 aaPredicted RBP5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms