RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 KANSL1Q7Z3B3 1105 aa15.42■□□□□ 0.06
CCDC40-201ENST00000269318 PRSS42Q7Z5A4 293 aa15.42■□□□□ 0.06
CCDC40-201ENST00000269318 MEX3DQ86XN8 651 aaKnown RBP15.42■□□□□ 0.06
CCDC40-201ENST00000269318 B3GNT7Q8NFL0 401 aa15.42■□□□□ 0.06
CCDC40-201ENST00000269318 ZNF578Q96N58 590 aaPredicted RBP15.42■□□□□ 0.06
CCDC40-201ENST00000269318 IL4I1Q96RQ9 567 aa15.42■□□□□ 0.06
CCDC40-201ENST00000269318 POLR2J2Q9GZM3 115 aaKnown RBP15.42■□□□□ 0.06
CCDC40-201ENST00000269318 SLC25A19Q9HC21 320 aa15.42■□□□□ 0.06
CCDC40-201ENST00000269318 MAU2Q9Y6X3 613 aa15.42■□□□□ 0.06
CCDC40-201ENST00000269318 COL6A3P12111 3177 aa15.42■□□□□ 0.06
CCDC40-201ENST00000269318 KLF4O43474 513 aa15.42■□□□□ 0.06
CCDC40-201ENST00000269318 BCAS1O75363 584 aaPredicted RBP15.42■□□□□ 0.06
CCDC40-201ENST00000269318 STSP08842 583 aa15.42■□□□□ 0.06
CCDC40-201ENST00000269318 GALNSP34059 522 aa15.42■□□□□ 0.06
CCDC40-201ENST00000269318 GIPRP48546 466 aa15.42■□□□□ 0.06
CCDC40-201ENST00000269318 IRF3Q14653 427 aa15.42■□□□□ 0.06
CCDC40-201ENST00000269318 ZNHIT3Q15649 155 aaPredicted RBP15.42■□□□□ 0.06
CCDC40-201ENST00000269318 CTF1Q16619 201 aa15.42■□□□□ 0.06
CCDC40-201ENST00000269318 WDR74Q6RFH5 385 aaPredicted RBP15.42■□□□□ 0.06
CCDC40-201ENST00000269318 CASP12Q6UXS9 341 aa15.42■□□□□ 0.06
CCDC40-201ENST00000269318 NPSR1Q6W5P4 371 aa15.42■□□□□ 0.06
CCDC40-201ENST00000269318 TTLL10Q6ZVT0 673 aa15.42■□□□□ 0.06
CCDC40-201ENST00000269318 RANBP3LQ86VV4 465 aaPredicted RBP15.42■□□□□ 0.06
CCDC40-201ENST00000269318 WDR5BQ86VZ2 330 aa15.42■□□□□ 0.06
CCDC40-201ENST00000269318 IQCF1Q8N6M8 205 aa15.42■□□□□ 0.06
CCDC40-201ENST00000269318 OR4N2Q8NGD1 307 aa15.42■□□□□ 0.06
CCDC40-201ENST00000269318 OR8J1Q8NGP2 316 aa15.42■□□□□ 0.06
CCDC40-201ENST00000269318 OR1L3Q8NH93 324 aa15.42■□□□□ 0.06
CCDC40-201ENST00000269318 FCGR1BQ92637 280 aa15.42■□□□□ 0.06
CCDC40-201ENST00000269318 MVB12AQ96EY5 273 aa15.42■□□□□ 0.06
CCDC40-201ENST00000269318 PLA2G12AQ9BZM1 189 aa15.42■□□□□ 0.06
CCDC40-201ENST00000269318 CAPN10Q9HC96 672 aa15.42■□□□□ 0.06
CCDC40-201ENST00000269318 TIMMDC1Q9NPL8 285 aa15.42■□□□□ 0.06
CCDC40-201ENST00000269318 PRMT8Q9NR22 394 aaPredicted RBP15.42■□□□□ 0.06
CCDC40-201ENST00000269318 CNOT2Q9NZN8 540 aaKnown RBP15.42■□□□□ 0.06
CCDC40-201ENST00000269318 PRAMEF2O60811 474 aa15.41■□□□□ 0.06
CCDC40-201ENST00000269318 ENTPD6O75354 484 aa15.41■□□□□ 0.06
CCDC40-201ENST00000269318 GABARAPO95166 117 aa15.41■□□□□ 0.06
CCDC40-201ENST00000269318 CLPSP04118 112 aa15.41■□□□□ 0.06
CCDC40-201ENST00000269318 MSL3P1P0C860 447 aa15.41■□□□□ 0.06
CCDC40-201ENST00000269318 FOLR1P15328 257 aa15.41■□□□□ 0.06
CCDC40-201ENST00000269318 PSMB9P28065 219 aa15.41■□□□□ 0.06
CCDC40-201ENST00000269318 EPHA8P29322 1005 aaPredicted RBP15.41■□□□□ 0.06
CCDC40-201ENST00000269318 ARL4DP49703 201 aa15.41■□□□□ 0.06
CCDC40-201ENST00000269318 EFNB1P98172 346 aa15.41■□□□□ 0.06
CCDC40-201ENST00000269318 ST3GAL4Q11206 333 aa15.41■□□□□ 0.06
CCDC40-201ENST00000269318 DYNC1I2Q13409 638 aaKnown RBP15.41■□□□□ 0.06
CCDC40-201ENST00000269318 AQP6Q13520 282 aa15.41■□□□□ 0.06
CCDC40-201ENST00000269318 SERTAD2Q14140 314 aa15.41■□□□□ 0.06
CCDC40-201ENST00000269318 FLYWCH1Q4VC44 716 aa15.41■□□□□ 0.06
CCDC40-201ENST00000269318 RASSF6Q6ZTQ3 369 aa15.41■□□□□ 0.06
CCDC40-201ENST00000269318 MBOAT2Q6ZWT7 520 aa15.41■□□□□ 0.06
CCDC40-201ENST00000269318 PIGXQ8TBF5 258 aa15.41■□□□□ 0.06
CCDC40-201ENST00000269318 TMEM255BQ8WV15 326 aa15.41■□□□□ 0.06
CCDC40-201ENST00000269318 FGF11Q92914 225 aa15.41■□□□□ 0.06
CCDC40-201ENST00000269318 FAM46AQ96IP4 442 aaKnown RBP15.41■□□□□ 0.06
CCDC40-201ENST00000269318 PRSS27Q9BQR3 290 aa15.41■□□□□ 0.06
CCDC40-201ENST00000269318 NLGN3Q9NZ94 848 aa15.41■□□□□ 0.06
CCDC40-201ENST00000269318 CNIH4Q9P003 139 aa15.41■□□□□ 0.06
CCDC40-201ENST00000269318 SLC7A7Q9UM01 511 aa15.41■□□□□ 0.06
CCDC40-201ENST00000269318 ERVK-19Q9WJR5 959 aa15.41■□□□□ 0.06
CCDC40-201ENST00000269318 TNRC6BQ9UPQ9 1833 aaKnown RBP15.41■□□□□ 0.06
CCDC40-201ENST00000269318 EFCAB10A6NFE3 127 aa15.4■□□□□ 0.06
CCDC40-201ENST00000269318 FMO6PO60774 539 aa15.4■□□□□ 0.06
CCDC40-201ENST00000269318 LYPD3O95274 346 aa15.4■□□□□ 0.06
CCDC40-201ENST00000269318 ADRA2AP08913 450 aa15.4■□□□□ 0.06
CCDC40-201ENST00000269318 GKN3PP0CG01 181 aa15.4■□□□□ 0.06
CCDC40-201ENST00000269318 GNSP15586 552 aa15.4■□□□□ 0.06
CCDC40-201ENST00000269318 FPR3P25089 353 aa15.4■□□□□ 0.06
CCDC40-201ENST00000269318 OR1D4P47884 311 aa15.4■□□□□ 0.06
CCDC40-201ENST00000269318 ST13P50502 369 aaKnown RBP15.4■□□□□ 0.06
CCDC40-201ENST00000269318 RNF144AP50876 292 aaPredicted RBP15.4■□□□□ 0.06
CCDC40-201ENST00000269318 GINS1Q14691 196 aa15.4■□□□□ 0.06
CCDC40-201ENST00000269318 SNAP47Q5SQN1 464 aa15.4■□□□□ 0.06
CCDC40-201ENST00000269318 ACSM5Q6NUN0 579 aa15.4■□□□□ 0.06
CCDC40-201ENST00000269318 MRGPREQ86SM8 312 aa15.4■□□□□ 0.06
CCDC40-201ENST00000269318 KMT5CQ86Y97 462 aa15.4■□□□□ 0.06
CCDC40-201ENST00000269318 ZNF615Q8N8J6 731 aa15.4■□□□□ 0.06
CCDC40-201ENST00000269318 C16orf52Q8NHV5 167 aa15.4■□□□□ 0.06
CCDC40-201ENST00000269318 BCL7BQ9BQE9 202 aa15.4■□□□□ 0.06
CCDC40-201ENST00000269318 PELOQ9BRX2 385 aaKnown RBP15.4■□□□□ 0.06
CCDC40-201ENST00000269318 CNPPD1Q9BV87 410 aa15.4■□□□□ 0.06
CCDC40-201ENST00000269318 POLDIP3Q9BY77 421 aaKnown RBP15.4■□□□□ 0.06
CCDC40-201ENST00000269318 EGLN3Q9H6Z9 239 aa15.4■□□□□ 0.06
CCDC40-201ENST00000269318 PILRBQ9UKJ0 227 aa15.4■□□□□ 0.06
CCDC40-201ENST00000269318 TRAPPC13A5PLN9 417 aa15.4■□□□□ 0.06
CCDC40-201ENST00000269318 PRKYO43930 277 aa15.4■□□□□ 0.06
CCDC40-201ENST00000269318 CT45A8P0DMV1 189 aa15.4■□□□□ 0.06
CCDC40-201ENST00000269318 CT45A9P0DMV2 189 aa15.4■□□□□ 0.06
CCDC40-201ENST00000269318 PIPP12273 146 aaPredicted RBP15.4■□□□□ 0.06
CCDC40-201ENST00000269318 DRD5P21918 477 aa15.4■□□□□ 0.06
CCDC40-201ENST00000269318 PCYT1AP49585 367 aa15.4■□□□□ 0.06
CCDC40-201ENST00000269318 ZXDAP98168 799 aa15.4■□□□□ 0.06
CCDC40-201ENST00000269318 BIKQ13323 160 aa15.4■□□□□ 0.06
CCDC40-201ENST00000269318 OCLNQ16625 522 aa15.4■□□□□ 0.06
CCDC40-201ENST00000269318 CT45A2Q5DJT8 189 aa15.4■□□□□ 0.06
CCDC40-201ENST00000269318 SLC25A30Q5SVS4 291 aa15.4■□□□□ 0.06
CCDC40-201ENST00000269318 PRAMEF17Q5VTA0 474 aa15.4■□□□□ 0.06
CCDC40-201ENST00000269318 NRMQ8IXM6 262 aa15.4■□□□□ 0.06
CCDC40-201ENST00000269318 STX19Q8N4C7 294 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms