RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 DECR1Q16698 335 aa21.15■□□□□ 0.98
SMARCB1-201ENST00000263121 EXOC3L2Q2M3D2 409 aa21.15■□□□□ 0.98
SMARCB1-201ENST00000263121 COLEC12Q5KU26 742 aa21.15■□□□□ 0.98
SMARCB1-201ENST00000263121 MRPL2Q5T653 305 aaKnown RBP21.15■□□□□ 0.98
SMARCB1-201ENST00000263121 FAHD1Q6P587 224 aa21.15■□□□□ 0.98
SMARCB1-201ENST00000263121 TSPYL5Q86VY4 417 aaPredicted RBP21.15■□□□□ 0.98
SMARCB1-201ENST00000263121 ZNF441Q8N8Z8 693 aa21.15■□□□□ 0.98
SMARCB1-201ENST00000263121 APCDD1LQ8NCL9 501 aa21.15■□□□□ 0.98
SMARCB1-201ENST00000263121 PIK3C3Q8NEB9 887 aa21.15■□□□□ 0.98
SMARCB1-201ENST00000263121 OR52J3Q8NH60 311 aa21.15■□□□□ 0.98
SMARCB1-201ENST00000263121 PRRC1Q96M27 445 aa21.15■□□□□ 0.98
SMARCB1-201ENST00000263121 GAL3ST4Q96RP7 486 aa21.15■□□□□ 0.98
SMARCB1-201ENST00000263121 LMF1Q96S06 567 aa21.15■□□□□ 0.98
SMARCB1-201ENST00000263121 ZNF223Q9UK11 482 aaPredicted RBP21.15■□□□□ 0.98
SMARCB1-201ENST00000263121 NINQ8N4C6 2090 aa21.14■□□□□ 0.97
SMARCB1-201ENST00000263121 CDHR4A6H8M9 788 aa21.14■□□□□ 0.97
SMARCB1-201ENST00000263121 TO15178 435 aa21.14■□□□□ 0.97
SMARCB1-201ENST00000263121 TPST2O60704 377 aa21.14■□□□□ 0.97
SMARCB1-201ENST00000263121 UMODP07911 640 aa21.14■□□□□ 0.97
SMARCB1-201ENST00000263121 DAPP51397 102 aa21.14■□□□□ 0.97
SMARCB1-201ENST00000263121 KDM4DQ6B0I6 523 aa21.14■□□□□ 0.97
SMARCB1-201ENST00000263121 C6orf15Q6UXA7 325 aaPredicted RBP21.14■□□□□ 0.97
SMARCB1-201ENST00000263121 CHERPQ8IWX8 916 aaKnown RBP21.14■□□□□ 0.97
SMARCB1-201ENST00000263121 MARVELD2Q8N4S9 558 aa21.14■□□□□ 0.97
SMARCB1-201ENST00000263121 C17orf47Q8NEP4 570 aa21.14■□□□□ 0.97
SMARCB1-201ENST00000263121 WDR36Q8NI36 951 aaKnown RBP21.14■□□□□ 0.97
SMARCB1-201ENST00000263121 GIPC3Q8TF64 312 aa21.14■□□□□ 0.97
SMARCB1-201ENST00000263121 LPAR4Q99677 370 aa21.14■□□□□ 0.97
SMARCB1-201ENST00000263121 PCNX2A6NKB5 2137 aa21.14■□□□□ 0.97
SMARCB1-201ENST00000263121 LOC102723996A0A087X1L8 192 aa21.13■□□□□ 0.97
SMARCB1-201ENST00000263121 PROB1E7EW31 1015 aa21.13■□□□□ 0.97
SMARCB1-201ENST00000263121 HS6ST1O60243 411 aa21.13■□□□□ 0.97
SMARCB1-201ENST00000263121 IL33O95760 270 aa21.13■□□□□ 0.97
SMARCB1-201ENST00000263121 H1F0P07305 194 aaKnown RBP21.13■□□□□ 0.97
SMARCB1-201ENST00000263121 RPSAP08865 295 aaKnown RBP21.13■□□□□ 0.97
SMARCB1-201ENST00000263121 ATP12AP54707 1039 aa21.13■□□□□ 0.97
SMARCB1-201ENST00000263121 PSMD4P55036 377 aaKnown RBP21.13■□□□□ 0.97
SMARCB1-201ENST00000263121 RGS8P57771 180 aaPredicted RBP21.13■□□□□ 0.97
SMARCB1-201ENST00000263121 PLAURQ03405 335 aa21.13■□□□□ 0.97
SMARCB1-201ENST00000263121 PIN1Q13526 163 aaPredicted RBP21.13■□□□□ 0.97
SMARCB1-201ENST00000263121 MICAQ29983 383 aa21.13■□□□□ 0.97
SMARCB1-201ENST00000263121 SLC36A3Q495N2 470 aa21.13■□□□□ 0.97
SMARCB1-201ENST00000263121 PDZK1Q5T2W1 519 aa21.13■□□□□ 0.97
SMARCB1-201ENST00000263121 FAM69BQ5VUD6 431 aa21.13■□□□□ 0.97
SMARCB1-201ENST00000263121 HLA-DQA1Q5Y7H0 255 aa21.13■□□□□ 0.97
SMARCB1-201ENST00000263121 TIPARPQ7Z3E1 657 aaKnown RBP21.13■□□□□ 0.97
SMARCB1-201ENST00000263121 OR2Y1Q8NGV0 311 aa21.13■□□□□ 0.97
SMARCB1-201ENST00000263121 PSD2Q9BQI7 771 aa21.13■□□□□ 0.97
SMARCB1-201ENST00000263121 PADI1Q9ULC6 663 aa21.13■□□□□ 0.97
SMARCB1-201ENST00000263121 PTRH2Q9Y3E5 179 aaKnown RBP21.13■□□□□ 0.97
SMARCB1-201ENST00000263121 PCDH17O14917 1159 aa21.12■□□□□ 0.97
SMARCB1-201ENST00000263121 FTH1P19P0C7X4 201 aa21.12■□□□□ 0.97
SMARCB1-201ENST00000263121 ZNF136P52737 540 aa21.12■□□□□ 0.97
SMARCB1-201ENST00000263121 SMIM11AP58511 58 aa21.12■□□□□ 0.97
SMARCB1-201ENST00000263121 DHRSXQ8N5I4 330 aa21.12■□□□□ 0.97
SMARCB1-201ENST00000263121 AMER2Q8N7J2 671 aa21.12■□□□□ 0.97
SMARCB1-201ENST00000263121 OR10G2Q8NGC3 310 aa21.12■□□□□ 0.97
SMARCB1-201ENST00000263121 NR4A3Q92570 626 aa21.12■□□□□ 0.97
SMARCB1-201ENST00000263121 C8orf44Q96CB5 159 aa21.12■□□□□ 0.97
SMARCB1-201ENST00000263121 ALPK1Q96QP1 1244 aa21.12■□□□□ 0.97
SMARCB1-201ENST00000263121 FUZQ9BT04 418 aa21.12■□□□□ 0.97
SMARCB1-201ENST00000263121 ANKRD60Q9BZ19 345 aa21.12■□□□□ 0.97
SMARCB1-201ENST00000263121 SEC24DO94855 1032 aaPredicted RBP21.12■□□□□ 0.97
SMARCB1-201ENST00000263121 CD63P08962 238 aa21.12■□□□□ 0.97
SMARCB1-201ENST00000263121 IGFBP5P24593 272 aa21.12■□□□□ 0.97
SMARCB1-201ENST00000263121 ELAVL4P26378 380 aaKnown RBP21.12■□□□□ 0.97
SMARCB1-201ENST00000263121 RNF4P78317 190 aa21.12■□□□□ 0.97
SMARCB1-201ENST00000263121 ADARB1P78563 741 aaKnown RBP21.12■□□□□ 0.97
SMARCB1-201ENST00000263121 RFX4Q33E94 735 aa21.12■□□□□ 0.97
SMARCB1-201ENST00000263121 C3orf38Q5JPI3 329 aa21.12■□□□□ 0.97
SMARCB1-201ENST00000263121 OFCC1Q8IZS5 231 aa21.12■□□□□ 0.97
SMARCB1-201ENST00000263121 OIT3Q8WWZ8 545 aa21.12■□□□□ 0.97
SMARCB1-201ENST00000263121 EFHD2Q96C19 240 aaPredicted RBP21.12■□□□□ 0.97
SMARCB1-201ENST00000263121 HSPBAP1Q96EW2 488 aa21.12■□□□□ 0.97
SMARCB1-201ENST00000263121 VMP1Q96GC9 406 aa21.12■□□□□ 0.97
SMARCB1-201ENST00000263121 MBOAT4Q96T53 435 aa21.12■□□□□ 0.97
SMARCB1-201ENST00000263121 NRSN2Q9GZP1 204 aa21.12■□□□□ 0.97
SMARCB1-201ENST00000263121 TOR3AQ9H497 397 aa21.12■□□□□ 0.97
SMARCB1-201ENST00000263121 ARMC7Q9H6L4 198 aa21.12■□□□□ 0.97
SMARCB1-201ENST00000263121 EVA1AQ9H8M9 152 aa21.12■□□□□ 0.97
SMARCB1-201ENST00000263121 MRTO4Q9UKD2 239 aaKnown RBP21.12■□□□□ 0.97
SMARCB1-201ENST00000263121 TRBV4-1A0A0J9YWV2 114 aa21.11■□□□□ 0.97
SMARCB1-201ENST00000263121 SPAARA0A1B0GVQ0 90 aa21.11■□□□□ 0.97
SMARCB1-201ENST00000263121 A0A1W2PRQ8 180 aa21.11■□□□□ 0.97
SMARCB1-201ENST00000263121 ARRDC5A6NEK1 342 aa21.11■□□□□ 0.97
SMARCB1-201ENST00000263121 H0YAE9 185 aa21.11■□□□□ 0.97
SMARCB1-201ENST00000263121 CAPGP40121 348 aa21.11■□□□□ 0.97
SMARCB1-201ENST00000263121 NR0B1P51843 470 aaKnown RBP21.11■□□□□ 0.97
SMARCB1-201ENST00000263121 SLC26A5P58743 744 aa21.11■□□□□ 0.97
SMARCB1-201ENST00000263121 EPS8Q12929 822 aa21.11■□□□□ 0.97
SMARCB1-201ENST00000263121 DGCR6Q14129 220 aa21.11■□□□□ 0.97
SMARCB1-201ENST00000263121 FGFBP1Q14512 234 aa21.11■□□□□ 0.97
SMARCB1-201ENST00000263121 PDK3Q15120 406 aa21.11■□□□□ 0.97
SMARCB1-201ENST00000263121 ZIK1Q3SY52 487 aaPredicted RBP21.11■□□□□ 0.97
SMARCB1-201ENST00000263121 GRAMD2AQ8IUY3 354 aa21.11■□□□□ 0.97
SMARCB1-201ENST00000263121 TAGAPQ8N103 731 aa21.11■□□□□ 0.97
SMARCB1-201ENST00000263121 OR4C3Q8NH37 302 aa21.11■□□□□ 0.97
SMARCB1-201ENST00000263121 DIO2Q92813 273 aa21.11■□□□□ 0.97
SMARCB1-201ENST00000263121 NR1H4Q96RI1 486 aaPredicted RBP21.11■□□□□ 0.97
SMARCB1-201ENST00000263121 FNDC11Q9BVV2 318 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms